chemistry 367l/392n macromolecular chemistry lecture 8
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Chemistry 367L/392N
Macromolecular ChemistryMacromolecular Chemistry
Lecture 8 Lecture 8
Chemistry 367L/392N
Measuring Molecular WeightMeasuring Molecular Weight Membrane Osmometry AlfredoAlfredo Vapor Phase Osmometry LindaLinda Viscometry GWGW Gel Permeation Chromatography
– Size exclusion Chromatography Light Scattering MALDI Others
– End group analysis YouYou
GWGW
GWGW
Chemistry 367L/392N
Chemistry 367L/392N
Molecular Weight from [Molecular Weight from []]
Mark-Houwink-Kuhn-Sakurada equation
[[] = K M] = K Maa
a = 1.8a = 1.8
a ≈ 0a ≈ 0
a = 0.5-0.8a = 0.5-0.8
Chemistry 367L/392N
Representative Viscosity-Molecular Weight Constantsa
PolymerPolymer
Polystyrene(atactic)c
Polyethylene(low pressure)Poly(vinyl chloride)
Polybutadiene98% cis-1,4, 2% 1,297% trans-1,4, 3% 1,2Polyacrylonitrile
Poly(methyl methacrylate-co-styrene)30-70 mol%71-29 mol%Poly(ethylene terephthalate)Nylon 66
SolventSolvent
CyclohexaneCyclihexaneBenzeneDecalin
Benzyl alcoholCyclohexanone
TolueneTolueneDMFg
DMF
1-Chlorobutane1-ChlorobutaneM-CresolM-Cresol
Temp Temp ooCC
355025135
155.420
30302525
30302525
Molecular WeightMolecular WeightRange Range 10 10-4-4
8-42e
4-137e
3-61f
3-100e
4-35e
7-13f
5-50f
5-16f
5-27e
3-100f
5-55e
4.18-81e
0.04-1.2f
1.4-5f
KK 10 1033
80 26.9 9.52 67.7
15.6 13.7
30.5 29.4 16.6 39.2
17.6 24.9 0.77 24.0
aa
0.500.500.5990.740.67
0.501.0
0.7250.7530.810.75
0.670.630.950.950.61
Chemistry 367L/392N
Mass SpectroscopyMass Spectroscopy
MALDIMALDI
Chemistry 367L/392N
Chemistry 367L/392N
Typical Mass SpectrometerTypical Mass Spectrometer
Chemistry 367L/392N
Mass SpectrumMass Spectrum
But…..how do you But…..how do you volatilize a volatilize a polymer??polymer??
Chemistry 367L/392N
Answer: Answer:
By ESI & MALDI !!By ESI & MALDI !!
Chemistry 367L/392N
Electrospray Ionization ESIElectrospray Ionization ESI
Atmospheric pressure ionization
Enables MS detection of large, non-volatile molecules (e.g., polymers) with no fragmentation (→Nobel Prize 2002)
Liquid elutes through a high voltage tip
Coulombic explosions yield a continuous mist of bare, gas-phase ions (positive or negative)
Conveniently coupled to liquid separations
Characterized by multiply charged ions
Newobjective.com
Chemistry 367L/392N
Electrospray Ionization: Formation of Charged Droplets
Formation of multiply charged ions
ESIESI
Chemistry 367L/392N
ElectrosprayElectrospray
Chemistry 367L/392N
ESI: the exact mechanisms are still debatedESI: the exact mechanisms are still debated
Chemistry 367L/392N
Formation of singly charged ions
Sample is co-crystallized with matrix (solid)
Koichi Tanaka, Nobel Prize 2002Koichi Tanaka, Nobel Prize 2002
MALDI: MALDI: MMatrix atrix AAssisted ssisted LLaser aser DDesorption esorption IIonizationonization
Chemistry 367L/392N
Drift region (D)
MALDI Time-of-flight
MALDI - TOFMALDI - TOF
MALDI TOF
Average time in TOF: 10-7 sec : average speed 1-2 x 105 km/h
Chemistry 367L/392N
h LaserLaser
1. Sample is mixed with 1. Sample is mixed with matrixmatrix e.g. dihydroxybenzoic acid and e.g. dihydroxybenzoic acid and dried on plate.dried on plate.
2. Laser flash ionizes matrix 2. Laser flash ionizes matrix molecules.molecules.
MHMH++
MALDI: MALDI: MMatrix atrix AAssisted ssisted LLaser aser DDesorption esorption IIonizationonization
+/- 20 kV+/- 20 kV Grid (0 V)Grid (0 V)
Sample plateSample plate
Chemistry 367L/392N
MatricesMatrices
Matrix
1,8,9-Trihydroxyanthracen(Dithranol) polymers
2,5-Dihydroxy benzoic acid(DHB)
proteins, peptides, polymers
-Cyano-4-hydroxycinnamic acid
peptides, (polymers)
4-Hydroxypicolinic acid oligonucleotides
Trans-Indol-3-acrylacid(IAA)
polymers
OH OH OH
OH
OH
COOH
C CH
OH
CN COOH
N
OH
COOH
NH
COOH
Chemistry 367L/392N
Time-of-flight (TOF) Mass AnalyzerTime-of-flight (TOF) Mass Analyzer
+
+
+
+
SourceSource Drift region (flight tube)Drift region (flight tube)
dete
ctor
VV
• Ions are formed in pulses.Ions are formed in pulses.
• The drift region is field free.The drift region is field free.
• Measures the Measures the timetime for ions to reach the detector. for ions to reach the detector.
• Small ions reach the detector before large ones.Small ions reach the detector before large ones.
Chemistry 367L/392N
Calibration of the mass scaleCalibration of the mass scaleThe mass-to-charge ratio of an ion is proportional to the square of its drift time.
t = Drift timeL = Drift lengthm = MassK = Kinetic energy of ionz = Number of charges on ion
22LL
2222 KKtt
zz
mm
Chemistry 367L/392N
THE UNIVERSITY OF TEXAS AT AUSTIN
WILLSON RESEARCH GROUPAustin AIChE-Fall 2004
OHHO
n
+
Cl
O
OO
nO
O
TEATHF
MALDI TOF Mass Spectrum (before acrylation)
MALDI TOF Mass Spectrum (after acrylation)
PEG Diacrylate Synthesis:PEG Diacrylate Synthesis:PEG Diacrylate Synthesis:PEG Diacrylate Synthesis:
M = (44)n + 18 M = (44)n + 126
THE UNIVERSITY OF TEXAS AT AUSTIN
WILLSON RESEARCH GROUPAustin AIChE-Fall 2004
MALDI Spectra
Chemistry 367L/392N
Monoisotopic massMonoisotopic massMonoisotopic masscorresponds tolowest mass peak
When the isotopes are clearly resolved the monoisotopic mass is used as it is the most accurate measurement.
Chemistry 367L/392N
1981.84
1982.84
1983.84
Mass spectrum of peptide with 94 C-atoms Mass spectrum of peptide with 94 C-atoms
(19 amino acid residues)(19 amino acid residues)
No 13C atoms (all 12C)
One 13C atom
Two 13C atoms
“Monoisotopic mass”
Chemistry 367L/392N
Mass spectrum of insulinMass spectrum of insulin
12C : 5730.61
13C
2 x 13C
Insulin has 257 C-atoms. Above this mass, the monoisotopic peak is too small to be very useful, and the average mass is usually used.
Chemistry 367L/392N
6130 6140 6150 6160 6170
Poorer resolution
Better resolution
What if the resolution is not so good?What if the resolution is not so good?At lower resolution, the mass measured is theAt lower resolution, the mass measured is the average mass.
Mass
Chemistry 367L/392N
Average massAverage massAverage mass corresponds to the centroid of the unresolved peak cluster
When the isotopes are not resolved, the centroid of the envelope corresponds to the weighted average of all the the isotope peaks in the cluster, which is the same as the average or chemical mass.
Chemistry 367L/392N15.01500 15.01820 15.02140 15.02460 15.02780 15.03100
Mass (m/z)
100
0
10
20
30
40
50
60
70
80
90
100
% Int
ensit
yISO:CH3
15.0229M
FWHM = M
How is mass resolution calculated?
R = M/M
Chemistry 367L/392N
Mass measurement accuracy depends on resolutionMass measurement accuracy depends on resolution
0
2000
4000
6000
8000
Co
un
ts
2840 2845 2850 2855
Mass (m/z)
Resolution = 14200
Resolution = 4500
Resolution =18100 15 ppm error
24 ppm error
55 ppm error
High resolution means better mass accuracy
Chemistry 367L/392N
CH3-(CHO)n-OH+Na +10671111
11551199
1023
979
935 1243
15 + 44x+17 +23
Mass Spectra of Synthetic Mass Spectra of Synthetic PolymersPolymers