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BioMed Central Page1of8 (page number not for citation purposes) BMC Molecular Biology Open Access BMC Molecular Biology 2002, 3 x Research article Aggregation and retention of human urokinase type plasminogen activator in the yeast endoplasmic reticulum Michael O Agaphonov, Nina V Romanova, Polina M Trushkina, Vladimir N Smirnov and Michael D Ter-Avanesyan* Address: Institute of Experimental Cardiology, Cardiology Research Center, 3rd Cherepkovskaya Str. 15A, Moscow, 121552, Russia E-mail: Michael O Agaphonov - [email protected]; Nina V Romanova - [email protected]; Polina M Trushkina - [email protected]; Vladimir N Smirnov - [email protected]; Michael D Ter-Avanesyan* - [email protected] *Corresponding author Abstract Background: Secretion of recombinant proteins in yeast can be affected by their improper folding in the endoplasmic reticulum and subsequent elimination of the misfolded molecules via the endoplasmic reticulum associated protein degradation pathway. Recombinant proteins can also be degraded by the vacuolar protease complex. Human urokinase type plasminogen activator (uPA) is poorly secreted by yeast but the mechanisms interfering with its secretion are largely unknown. Results: We show that in Hansenula polymorpha overexpression worsens uPA secretion and stimulates its intracellular aggregation. The absence of the Golgi modifications in accumulated uPA suggests that aggregation occurs within the endoplasmic reticulum. Deletion analysis has shown that the N-terminal domains were responsible for poor uPA secretion and propensity to aggregate. Mutation abolishing N-glycosylation decreased the efficiency of uPA secretion and increased its aggregation degree. Retention of uPA in the endoplasmic reticulum stimulates its aggregation. Conclusions: The data obtained demonstrate that defect of uPA secretion in yeast is related to its retention in the endoplasmic reticulum. Accumulation of uPA within the endoplasmic reticulum disturbs its proper folding and leads to formation of high molecular weight aggregates. Background Though the secretory pathway is organized similarly in yeast and in other eukaryotic organisms, not all proteins of higher eukaryotes can be efficiently secreted from yeast cells. Secretion of some recombinant or mutant proteins is affected by their improper folding in the yeast endoplas- mic reticulum (ER) [1,2] and rapid degradation of mis- folded molecules by cytosolic proteasome complex after retrograde translocation from the lumenal to cytoplasmic face of the ER (ER associated protein degradation, ERAD) [3,4]. Alternatively, misfolded proteins can be sorted from the late Golgi to vacuole, yeast homologue of lysosome, and degraded by the vacuolar protease complex [5,6]. The recognition and retention of misfolded proteins in the ER is carried out by the "ER quality control" (ERQC) machin- ery. Saccharomyces cerevisiae differs by the organization of ERQC not only from higher eukaryotes, but also from Schizosaccharomyces pombe. However, in spite of these spe- cies-specific differences, the ERQC involves processing of the N-linked oligosaccharides in all eukaryotes reflecting importance of N-glycosylation for protein folding in vivo [for review, see [7]]. Published: 7 October 2002 BMC Molecular Biology 2002, 3:15 Received: 12 March 2002 Accepted: 7 October 2002 This article is available from: http://www.biomedcentral.com/1471-2199/3/15 © 2002 Agaphonov et al; licensee BioMed Central Ltd. This article is published in Open Access: verbatim copying and redistribution of this article are per- mitted in all media for any purpose, provided this notice is preserved along with the article's original URL.

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Page 1: BMC Molecular Biology BioMed Central · 2017. 8. 25. · that the N-terminal domains were responsible for poor uPA secretion and propensity to aggregate. Mutation abolishing N-glycosylation

BioMed CentralBMC Molecular Biology

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Open AcceBMC Molecular Biology 2002, 3 xResearch articleAggregation and retention of human urokinase type plasminogen activator in the yeast endoplasmic reticulumMichael O Agaphonov, Nina V Romanova, Polina M Trushkina, Vladimir N Smirnov and Michael D Ter-Avanesyan*

Address: Institute of Experimental Cardiology, Cardiology Research Center, 3rd Cherepkovskaya Str. 15A, Moscow, 121552, Russia

E-mail: Michael O Agaphonov - [email protected]; Nina V Romanova - [email protected]; Polina M Trushkina - [email protected]; Vladimir N Smirnov - [email protected]; Michael D Ter-Avanesyan* - [email protected]

*Corresponding author

AbstractBackground: Secretion of recombinant proteins in yeast can be affected by their improper foldingin the endoplasmic reticulum and subsequent elimination of the misfolded molecules via theendoplasmic reticulum associated protein degradation pathway. Recombinant proteins can also bedegraded by the vacuolar protease complex. Human urokinase type plasminogen activator (uPA) ispoorly secreted by yeast but the mechanisms interfering with its secretion are largely unknown.

Results: We show that in Hansenula polymorpha overexpression worsens uPA secretion andstimulates its intracellular aggregation. The absence of the Golgi modifications in accumulated uPAsuggests that aggregation occurs within the endoplasmic reticulum. Deletion analysis has shownthat the N-terminal domains were responsible for poor uPA secretion and propensity to aggregate.Mutation abolishing N-glycosylation decreased the efficiency of uPA secretion and increased itsaggregation degree. Retention of uPA in the endoplasmic reticulum stimulates its aggregation.

Conclusions: The data obtained demonstrate that defect of uPA secretion in yeast is related toits retention in the endoplasmic reticulum. Accumulation of uPA within the endoplasmic reticulumdisturbs its proper folding and leads to formation of high molecular weight aggregates.

BackgroundThough the secretory pathway is organized similarly inyeast and in other eukaryotic organisms, not all proteinsof higher eukaryotes can be efficiently secreted from yeastcells. Secretion of some recombinant or mutant proteinsis affected by their improper folding in the yeast endoplas-mic reticulum (ER) [1,2] and rapid degradation of mis-folded molecules by cytosolic proteasome complex afterretrograde translocation from the lumenal to cytoplasmicface of the ER (ER associated protein degradation, ERAD)[3,4]. Alternatively, misfolded proteins can be sorted from

the late Golgi to vacuole, yeast homologue of lysosome,and degraded by the vacuolar protease complex [5,6]. Therecognition and retention of misfolded proteins in the ERis carried out by the "ER quality control" (ERQC) machin-ery. Saccharomyces cerevisiae differs by the organization ofERQC not only from higher eukaryotes, but also fromSchizosaccharomyces pombe. However, in spite of these spe-cies-specific differences, the ERQC involves processing ofthe N-linked oligosaccharides in all eukaryotes reflectingimportance of N-glycosylation for protein folding in vivo[for review, see [7]].

Published: 7 October 2002

BMC Molecular Biology 2002, 3:15

Received: 12 March 2002Accepted: 7 October 2002

This article is available from: http://www.biomedcentral.com/1471-2199/3/15

© 2002 Agaphonov et al; licensee BioMed Central Ltd. This article is published in Open Access: verbatim copying and redistribution of this article are per-mitted in all media for any purpose, provided this notice is preserved along with the article's original URL.

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Human urokinase type plasminogen activator (uPA) ispoorly secreted by yeast. Although three mutations im-proving uPA secretion in yeast have been characterized[8–10], the bottleneck for uPA secretion remains uncer-tain. There are some data indicating that the efficiency ofuPA secretion in yeast depends on the ERQC machinery.Disruption of the S. cerevisiae PMR1 gene, encoding theGolgi membrane Ca2+ ion pump, improves uPA secre-tion, decreases protein glycosylation [8] and causes a de-fect of the ERAD [11]. The Hansenula polymorpha opu24mutation with the uPA supersecretion phenotype also im-pairs protein glycosylation and possibly causes defect ofthe ERAD, since, similarly to pmr1, the opu24 mutant isalso hypersensitive to dithiothreitol and tunicamycin,drugs perturbing protein folding in the ER [10]. However,the S. cerevisiae ssu21 mutation improving uPA secretion,does not alter neither glycosylation of secretory proteins[9], nor sensitivity to dithiothreitol and tunicamycin (M.Agaphonov, unpublished).

In this study we demonstrate that inefficient uPA secretionin yeast is related to its retention in the ER that is condi-tioned by the uPA N-terminal domains. Accumulation ofuPA within the ER affects its folding and leads to forma-tion of high molecular weight aggregates.

ResultsOverexpression of the uPA impairs its secretion and causes accumulation in an aggregated formWe have constructed several H. polymorpha strains bearingdifferent copy numbers of the uPA expression cassette.This cassette consisted of the uPA gene under the controlof strong regulatable promoter of the H. polymorpha MOXgene, which encodes a key enzyme of the methanol utili-zation pathway, alcohol oxidase. In all cases mox-negativerecipients were used for obtaining these transformants

(see Materials and methods). Among them three trans-formants possessed a single copy of the expression cas-sette integrated into different genomic loci. Theproductivity of extracellular uPA in single copy integrantsvaried depending on the integration locus but was alwayshigher than in strains with multiple copies of the integrat-ed cassette (Table 1). Immunoblot analysis of cell lysatesrevealed that the amount of intracellular uPA grew drasti-cally with the increase of dosage of the expression cassette,while uPA activity dropped. This indicates that intracellu-lar uPA was accumulated mostly in an inactive form.

Further analysis has shown that intracellular uPA accumu-lated in a form of high molecular weight aggregates, sinceit could be precipitated by centrifugation of cell lysates at10,000 g for 10 min in the presence of a detergent, solubi-lizing membrane associated proteins (Figure 1B). uPAfrom culture supernatants of the single copy integrantsmigrated on the SDS PAGE as a broad smear (Figure 2,lane 3), which could be converted into the distinct ~30kDa band by treatment with endoglycosidase H (EndoH)(Figure 2, lane 4). In human cells uPA is synthesized as a48 kDa zymogen consisting of three domains: two N-ter-minal domains, not essential for the enzymatic activity,and the C-terminal serine protease domain (Figure 1A).uPA zymogen is activated by hydrolysis of the K158-I159

peptide bond. The accuracy of the cleavage is essential foruPA activation, since hydrolysis of the R156-F157 peptidebond by thrombin produces inactive protein [for review,see [12]]. EndoH-treated extracellular uPA migrated fasterthan its N-terminally truncated variant lacking the N-gly-cosylation site (Figure 2, lane 5), indicating that it is aproduct of the uPA cleavage at the activation site, becausecleavage at other sites would result in uPA derivativesshowing either different molecular weight or no activity.

Table 1: Dependence of u-PA levels on the copy number and integration locus of the expression cassette.

Copy number in locus: u-PA (%)

Strain mox leu2 telomere activity in culture medium activity in cell lysate amount in cell lysate*

DLU/L 1 100 100 100DL�M/pAM226 1 96 119 98DL�M/pAM219/1 1 68 59 21DL�M/pAM219/2 2 50 49 170DLU/pAM219 1 1 29 71 560DLU/pAM226 1 1 17 45 620DL�M/pAM281/1 ~8 10 7 1400DL�M/pAM281/2 ~8 20 7 1100

*Calculated by comparison of intensities of the 50 kDa band revealed by Western blotting of serially diluted cell lysates.

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In contrast to the extracellular form, intracellular uPA wascore glycosylated, since it migrated on SDS gel as a distinctband and its electrophoretic mobility only slightly in-creased after EndoH treatment (Figure 2, lanes 1 and 2).This means that the N-linked oligosaccharide chain of in-tracellular uPA had not received the Golgi modifications,and, therefore, uPA aggregates were formed within the ER.This conclusion was further confirmed (see below).

Secretion of uPA depends on the presence of N-glycosyla-tion site and N-terminal domainsIn eukaryotic cells uPA is modified by an attachment ofthe glycoside chain to the N302 residue. Substitution ofthis residue for another one abolishes the N-glycosylationof uPA [13]. uPA variants with N or Q residue at the posi-tion 302 in the full-length enzyme (uPA and uPA-Q) or inits N-terminally truncated form (uPA-C and uPA-CQ)(Figure 1A) were expressed in H. polymorpha and theiramounts in culture medium were compared with the useof fibrinolytic activity assay and immunoblotting. Theseanalyses have shown that both alteration of the N-glyco-sylation site and presence of the N-terminal domains de-creases efficiency of uPA secretion (Table 2). The lowerdifference in activity of glycosylated and unglycosylatedvariants, than it may be deduced from the difference inamounts of immunoreactive protein can be explained bythe inhibitory effect of the yeast N-glycoside chain on thespecific activity of uPA towards the high molecular weightsubstrates [14].

Figure 1Schematic representation of the uPA variants (A) and Western blot analysis of uPA in subcellular fractions oftransformants expressing different uPA variants (B). Arrows indicate the position of activation cleavage site."Q302"indicates the mutation abolishing the N-glycosylation of uPA. Transformants DLU, DLC, DLQ and DLCQ, expressing uPA,uPA-C, uPA-Q and uPA-CQ, respectively, are described in Materials and methods. P and S, pellet and supernatant fractions,respectively. Pellets were dissolved in a 2-fold volume of starting lysate.

Figure 2Western blot analysis of uPA in intracellular aggre-gates and culture medium. Lanes 1 and 2, pellet fractionof cell lysate of the DLU strain expressing full-length uPAbefore and after treatment with EndoH, respectively; lanes 3and 4, culture medium of the same strain before and afterEndoH treatment, respectively; lane 5, pellet fraction of celllysate of the DLCQ strain expressing uPA-CQ.

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Similar pattern of secretion of different uPA variants wasrevealed in the S. cerevisiae integrants carrying a singlecopy of the uPA expression cassette (Figure 3), indicatingapplicability of the obtained results to different yeast spe-cies. However, in contrast to H. polymorpha, the transform-ants of S. cerevisiae bearing the expression cassettesintegrated in a single copy did not accumulate uPA intra-cellularly. On the other hand, such accumulation tookplace in transformants with the multicopy uPA expressionvector (data not shown). Above we demonstrated that inH. polymorpha high levels of uPA expression, inhibiting se-cretion, are always accompanied with its intracellular ac-cumulation (Table 1). Basing on this, we concluded thatuPA expression levels in S. cerevisiae transformants with asingle copy of the uPA expression cassette were lower thanthose, which might inhibit its secretion.

Aggregation of uPA is defined by accumulation within the ERDistribution of different uPA variants between the solubleand pellet fractions obtained by centrifugation of celllysates (Figure 1) depended on their secretion potential.The highest proportion of soluble to aggregated form wasobserved for the best secreted uPA variant (uPA-C),whereas the lowest one was in the case of the worst secret-ed variant (uPA-Q). Since the major bands of the solublefractions of the uPA and uPA-C variants corresponded tothe core-glycosylated protein, they might represent a poolof newly translocated molecules, whose fate had not beendetermined yet, and properly folded molecules, which areready to leave the ER or already entered the Golgi appara-tus, but have not received modifications altering theirelectrophoretic mobility.

The amount of uPA in the soluble fraction should dependon the rates of uPA synthesis, aggregation and exit fromthe ER. To prevent the latter process, the uPA and uPA-Cvariants were modified by the substitution of 12 C-termi-nal amino acid residues for the KDEL sequence, represent-

ing the ER retention signal. This should retain in the ERcorrectly folded uPA, which is normally secreted, and thusincrease proportion of soluble to aggregated uPA in celllysates. Indeed, such modification abolished the exit ofboth uPA variants into culture medium (data not shown)and led to the increase of their amounts in cell lysates,though this effect was much more pronounced for uPA-C(Figure 4). Surprisingly, this did not increase the amountof soluble form of both uPA variants in cell lysates. Since

Table 2: Comparison of secretion efficiencies of different uPA variants by H. polymorpha

Amount in culture medium determined by:

uPA variant Fibrinolytic activity assay (%) Western blotting* (%)

uPA 100 100uPA-C 1850 1500uPA-Q 30 14

uPA-CQ 770 330

*Calculated by comparison of intensities of the 30 kDa band revealed by Western blotting of serially diluted culture supernatants. uPA in culture medium was treated with EndoH prior to the analysis.

Figure 3Halo-forming ability of S. cerevisiae (Sc) and H. poly-morpha (Hp) transformants expressing different uPAvariants. Yeast transformants were patched on fibrin-con-taining plates and incubated for 20 h (H. polymorpha) or 40 h(S. cerevisiae).

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full-length uPA showed a high degree of aggregation on itsown, the addition of the ER retention signal only slightlyincreased its aggregation degree. In contrast, the retentionin the ER of uPA-C, which normally is less prone to aggre-gate, led to a drastic increase of amount of aggregatedform. At the same time amount of the soluble form of uPAdropped (Figure 4). This indicates that accumulation ofuPA in the ER causes its aggregation.

Accumulation of the wild type uPA in the H. polymorphaER may result from its retention in this compartment dueto incorrect folding in the heterologous host. Normallymisfolded proteins in the ER are eliminated by the ERADpathway. The data presented in this study suggest that uPAcan partially degrade within the yeast cell. In fact, the rateof uPA synthesis in the transformant DLU/pAM226, bear-ing two copies of the expression cassette, must not exceedmore than two-fold the rate of uPA synthesis in the DLU/L integrant with a single copy of this cassette. However,the difference in amount of intracellular uPA in thesetransformants appeared to be much bigger (Table 1). Thediscrepancy between the expected and observed differencein intracellular accumulation of uPA cannot be explainedby worsening uPA secretion, since in the DLU/L strain theamount of extracellular enzyme constituted less than 10%of that of its intracellular form (0.11 �g of extracellularuPA vs. 1.6 �g of intracellular uPA per 1 mg of total cellu-lar protein). Thus, the observed difference in amount ofintracellular uPA probably was due to the degradation ofsignificant portion of uPA in the transformants with lowerexpression levels and rescue of misfolded uPA by aggrega-tion upon the higher expression levels.

Above it was shown that accumulation of uPA within theER causes its aggregation. This means that defect of degra-dation of uPA in this compartment should increase itsamount and, therefore, the aggregation degree. This sug-gestion was supported by the results of analysis of the ag-gregation pattern of uPA-KDEL expressed in the H.polymorpha opu24 mutant. The uPA supersecretion opu24mutation has been previously shown to cause phenotypescharacteristic of the ERAD lesion [10]. Impairment of theERAD should save misfolded uPA from degradation, thusincreasing its amount within the ER. The amount of aggre-gated but not soluble form of uPA-KDEL appeared to bemuch higher in the mutant than in the wild type cells con-firming that accumulation of uPA in the ER is accompa-nied by its aggregation (Figure 5). Interestingly, thismutation did not noticeably influence the aggregationpattern of the full-length uPA lacking the ER retention sig-nal (data not shown). This indicates that accumulation ofwild type uPA within the ER of the mutant cells was not

Figure 4Distribution of uPA between the supernatant (S) andpellet (P) fractions of cell lysates. Western blot analysisof uPA. The lysates of the following transformants were frac-tionated by centrifugation: DL/pAM226 (uPA), DL/pAM410(uPA-C), DLpNR4 (uPA-KDEL) and DL/pNR5 (uPA-C-KDEL). Pellets were dissolved in a 5-fold volume of startinglysate.

Figure 5The aggregation pattern of uPA-KDEL in the opu24mutant. Western blot analysis of uPA. S and P, the superna-tant and pellet fractions of the cell lysates of 24–8 V/pNR4(opu24) and 8 V/pNR4 (OPU24) strains. Pellets were dis-solved in a 100-fold volume of starting lysate.

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accelerated though degradation of misfolded protein wasimpaired. Thus, it is possible to suggest that this mutationfacilitates exit of uPA from the ER probably due to the ac-tivation of mechanisms improving efficiency of its fold-ing.

DiscussionThe data obtained show that efficient uPA secretion de-mands an optimal level of its expression: both low and in-creased expression did not result in the maximal levels ofuPA secretion. Indeed, we observed that the best uPA se-creting strains were those containing the uPA expressioncassette integrated in a single copy into the MOX or LEU2genes. In contrast, integrants carrying a single copy of theuPA cassette integrated into a telomere region producedless uPA and were less efficient in uPA secretion. On theother hand, strains with multiple copies of the integratedcassette also secreted less uPA and accumulated it in an in-active form intracellularly. Comparison of strains withuPA expression exceeding an optimal level showed an in-verted correlation between the efficiency of its expressionand secretion (Table 1). This can explain why no mutantswith increased uPA expression levels were obtained so faramong those producing more of its extracellular form.

We also found that upon overexpression uPA is accumu-lated in a form of high molecular weight aggregates. Theabsence of the Golgi modifications in accumulated uPAsuggested that its aggregation occurred within the ER. De-letion analysis has shown that the N-terminal domains ofuPA were responsible for the elevated levels of its aggrega-tion. Alteration of the N-glycosylation site of uPA also re-sulted in its intracellular accumulation and aggregation.Thus, it is possible to suggest that both the presence of N-terminal domains and the absence of N-glycosylationcaused intracellular accumulation of uPA, which inter-fered with its proper folding and resulted in subsequentaggregation in the ER. In agreement with this, the presenceof the ER retention signal significantly increased aggrega-tion degree of the best secreted uPA variant lacking the N-terminal domains.

Some of the ERAD substrates, e. g. mutant carboxy pepti-dase Y, can escape degradation and accumulate within theER if they lack the N-linked oligosaccharide chains [15].Thus, it is possible that the misfolded uPA variants lackingthe N-glycosylation site also escape degradation and accu-mulate in the ER, interfering with the folding of newlysynthesised molecules due to the "crowding" effect. Thismay explain why these uPA variants demonstrated worsesecretion and higher propensity to aggregate.

The aggregation of uPA on its own is unlikely to be thecause of its poor secretion by yeast cells, since transform-ants bearing a single copy of the uPA expression cassette

integrated into the MOX or LEU2 loci showed both highersecretion rate of uPA and higher degree of its aggregation,than transformant with a single copy of this cassette inte-grated into a telomere region. Moreover, it is possible thatto some extent, the aggregation of uPA even improves itssecretion: accumulation in aggregates may decrease uPAcrowding in the ER, thus facilitating its proper folding andsubsequent secretion.

The increased aggregation of uPA-KDEL in the H. polymor-pha opu24 mutant provides an additional evidence for theinterference of uPA accumulation within the ER with itsfolding. We suggest that the degradation rate of uPA-KDEL in this mutant was reduced due to the ERAD lesion.In contrast, the opu24 mutation did not stimulate aggrega-tion of uPA lacking the ER retention signal. This indicatesthat a significant portion of uPA escaped from the ER,probably due to improved folding, which may be the rea-son of the "supersecretion" phenotype of this mutant.

ConclusionsIn this work we demonstrate that in H. polymorpha overex-pression poisons uPA secretion and stimulates its intracel-lular aggregation. The absence of the Golgi modificationsin accumulated uPA suggests that the aggregation occurswithin the ER. Deletion analysis has shown that the N-ter-minal domains of uPA were responsible for its poor secre-tion and propensity to aggregate. Mutation abolishing N-glycosylation decreased the efficiency of uPA secretionand increased its aggregation degree. Retention of uPA inthe ER by means of the KDEL signal also led to its accumu-lation in an aggregated, but not in soluble form, and theamount of uPA-KDEL aggregates increased in the opu24mutant with defects in the ER-associated degradation ofmisfolded proteins. These experiments demonstrate thatthe increase of uPA content in the yeast ER interferes withits folding. The data obtained in this work allow us to sug-gest that uPA is poorly secreted by yeast, because its fold-ing requires milieu of the ER of higher eukaryotes. Theunfavorable milieu in the yeast ER causes incorrect fold-ing of significant portion of uPA, which is retained in theER and undergoes either degradation or aggregation.

MethodsYeast strainsThe H. polymorpha strains DL1-L (leu2) derived from DL-1(ATCC 26012), 8 V (leu2) and 24–8 V (opu24 leu2) de-rived from CBS4732 (ATCC 34438) were described earlier[10,16,17]. The trp3 mutant DLT2 (leu2 mox, trp3::LEU2)was obtained by transformation of the DL1-L strain withthe plasmid pMLT�, digested with XhoI and Ecl136II asdescribed earlier [18]. The DL1-L�M strain (leu2 �mox)was obtained by transformation of DLT2 with the XhoIand Ecl136II digested plasmid pSM�. The cassettes ex-pressing different variants of uPA were introduced into the

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H. polymorpha genome either by replacement of the MOXgene [18], or via single copy integration of the expressionvectors possessing the HpLEU2-d selectable marker intothe LEU2 locus [19]. The uPA expressing transformantsare listed in Table 3. Integration into the MOX locus wasperformed via transformation of the DLT2 strain with theplasmids pSM1, pUR2SM1, pSMWC or pSMWCQ, digest-ed with XhoI and Ecl136II. Integration into the LEU2 locuswas performed via transformation of the leu2 strains withthe plasmids pAM226, pAM410, pNR4 or pNR5, digestedwith Ecl136II. The S. cerevisiae strains expressing differentuPA variants were obtained via integration of the EcoRV-digested expression vectors pNR9, pNR23, pNR26 andpNR27 into the URA3 locus of the YPH499 strain [20].

PlasmidsThe plasmids used in this study are listed in Table 4. TheuPA expression vectors pAM219, pAM226 and pAM281were constructed by the insertion of sequence encodinguPA fused to the signal peptide of the Kluyveromyces lactiskiller toxin [21] under control of the MOX promoter intothe BamHI and HindIII sites of the AMIpL1, AMIpLD1 andAMIpSL shuttle vectors [19], respectively. This insert con-sisted of a 1.8 kb XhoI-BamHI fragment of the pSM1 plas-mid [18] and an adapter, which was obtained byannealing the oligonucleotides5'GATCCGCAGTCACACCAAGGAAGAGAATGGCCTGGCCCTCTGA3' and5'AGCTTCAGAGGGCCAGGCCATTCTCTTCCTTGGTGTGACTGCG3'. To allow ligation of the BamHI cohesive endof these vectors and the XhoI cohesive end of the insert,two bp of their overhangs were filled in by the Klenow en-zyme. The expression vectors pAM410 and pSMWC en-coding the N-terminally truncated uPA were constructedby insertion of a 0.8 kb BglI-BamHI fragment of pWC28(kindly given by M. Minashkin), carrying the sequence en-coding uPA protease domain, into the KpnI and BamHIsites of the pAM226 and pSM1 plasmids, respectively (3'-terminal overhangs of KpnI and BglI were removed by theKlenow enzyme). The plasmid pSMWCQ was constructedby replacement of the 0.7 kb BamHI-EcoRI fragment ofpSMWC for the corresponding fragment of pUR2SM [10].The expression vectors pNR4 and pNR5 encoding uPAvariants with the KDEL ER retention signal were construct-ed by the insertion of an adapter, which was obtained byannealing the oligonucleotides5'GATCAAGGACGAGCTGT3' and5'AGCTACAGCTCGTCCTT3', between the BamHI andHindIII sites of pAM226 and pAM410.

The S. cerevisiae uPA expression vectors were based on theYIpSEC-NR8 integrative shuttle vector, which was ob-tained from the YEpSEC1 plasmid [21] by deletion of theSnaBI-AatII fragment, carrying the 2 �m DNA sequenceand the LEU2 gene. The wild type uPA expression vector

pNR9 was constructed by insertion of the 1.2 kb KpnI-Hin-dIII fragment of the pAM226 plasmid into the corre-sponding sites of the YIpSEC-NR8 plasmid. The uPA-Cexpression vector pNR23 was obtained by replacement ofthe KpnI-BamHI fragment in the pNR9 plasmid for theBglI-BamHI fragment of the pWC28 plasmid (3'-terminaloverhangs of KpnI and BglI were removed by the Klenowenzyme). The uPA-Q and uPA-CQ expression vectorspNR26 and pNR27 were obtained by replacement of theEcoRI-BamHI fragment in the plasmids pNR9 and pNR23for the corresponding fragment of pUR2SM.

Culture conditionsCulture conditions for the H. polymorpha strains and con-ditions for the induction of uPA expression in theCBS4732 derivatives were described previously [19]. Toinduce uPA expression in transformants of the DL1-Lstrain, overnight YPD cultures were 6-fold diluted withYPM medium (2% Peptone, 1% Yeast extract, 2.5% meth-anol, 150 mM NaCl) and incubated at 37�C for 50–60 h.

Analyses of uPA expressionTo prepare lysates, cells were disrupted with glass beads inTBST buffer (30 mM tris-HCl pH7.5, 150 mM NaCl, 2%Triton � 100), containing protease inhibitors, 1 mM phe-nylmethylsulfonyl fluoride (PMSF), 0.1 mM benzami-dine, 0.1 mM sodium metabisulphite, 0.5 �g/ml TPCK,0.5 �g/ml TLCK, 2.5 �g/ml antipain, 0.5 �g/ml leupep-tine, 1.0 �g/ml pepstatin A, 2.0 �g/ml aprotinine. The pro-tease inhibitors were omitted if lysates were analyzed forthe uPA activity. Amounts of active uPA were determinedby fibrinolytic activity assay [22]. Total amounts of uPA incell lysates and culture medium of different transformantswere compared by probing appropriately diluted lysatesand culture supernatants with the anti-uPA antibody spe-cific to the uPA protease domain [23]. The amounts of u-PA in culture medium were normalized to the levels of to-tal cellular protein [24], whereas amounts of u-PA fromcell lysates were normalized to the levels of soluble cellu-lar protein in a sample assayed as described [25]. To studyuPA aggregation, cell debris was removed from lysates bycentrifugation at 300 g for 10 min and lysates were centri-fuged again at 10,000 g for 10 min. Obtained pellet andsupernatant fractions were analyzed by Western blotting.

A qualitative test for the ability of yeast transformants tosecrete uPA was performed by examination of their capac-ity to create haloes during growth on fibrin-containingmedia, as described previously [9,18].

Transformation of H. polymorpha and Escherichia coli cellsH. polymorpha was transformed by the modified lithiumacetate method [26]. E. coli was transformed as described[27].

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Page 8: BMC Molecular Biology BioMed Central · 2017. 8. 25. · that the N-terminal domains were responsible for poor uPA secretion and propensity to aggregate. Mutation abolishing N-glycosylation

BMC Molecular Biology 2002, 3 http://www.biomedcentral.com/1471-2199/3/15

AcknowledgementsThis work was partially supported by the INTAS grant 01-0583.

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