biodynamics 2013

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A Hybrid Experimental/Modeling Approach to Studying Pituitary Cell Dynamics Richard Bertram Department of Mathematics and Programs in Neuroscience and Molecular Biophysics Florida State University, Tallahassee, FL. Biodynamics 2013 Funding: National Science Foundation DMS1220063

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A Hybrid Experimental/Modeling Approach to Studying Pituitary Cell Dynamics Richard Bertram Department of Mathematics and Programs in Neuroscience and Molecular Biophysics Florida State University, Tallahassee, FL. Funding : National Science Foundation DMS1220063 . - PowerPoint PPT Presentation

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Page 1: Biodynamics  2013

A Hybrid Experimental/Modeling Approach to Studying Pituitary Cell

Dynamics

Richard Bertram

Department of Mathematicsand

Programs in Neuroscience and Molecular Biophysics Florida State University, Tallahassee, FL.

Biodynamics 2013

Funding: National Science Foundation DMS1220063

Page 2: Biodynamics  2013

Joël Tabak Patrick Fletcher

Maurizio Tomaiuolo(Univ. Pennsylvania)

Page 3: Biodynamics  2013

Five types of anterior pituitary endocrine cells

1. Lactotrophs: secrete prolactin

2. Somatotrophs: secrete growth hormone

3. Gonadotrophs: secrete luteinizing hormone andfollicle stimulating hormone

4. Corticotrophs: secrete ACTH

5. Thyrotrophs: secrete thyroid stimulating hormone

Page 4: Biodynamics  2013

Goal

Use mathematical modeling and analysis to help understand the electrical activity of the different types of endocrine pituitary cells

Van Goor et al., J. Neurosci., 2001:5902, 2001

Spiking, littlesecretion Bursting,

much moresecretion

What makes pituitary cells burst and secrete?

Page 5: Biodynamics  2013

Equations

voltage

IK activation

cytosolic calcium

IBK activation

Ionic current have an Ohmic form, e.g.,

Conductance and time constants are all parameters.There are more parameters in the equilibrium functions.

Page 6: Biodynamics  2013

Pituitary cells are very heterogeneousThe mix of ionic currents within a single cell type is highly variable, as shown with the GH4C1 cell line…

Cell 1

Cell 2

Cell 3

Page 7: Biodynamics  2013

Why does heterogeneity matter?

One spiking model cell

Another spiking model cell

A third spikingmodel cell

Tomaiuolo et al., Biophys. J., 103:2021, 2012

Page 8: Biodynamics  2013

What we’d like to do…

Parameterize the model to an individual cell,while still patched onto that cell. Then differentcells will have different parameter vectors.

Page 9: Biodynamics  2013

0 0.5 1 1.5-70

-60

-50

-40

-30

-20

-10

Time (sec)

V (mV)

period

activesilent

amplitude

min

peaks

Set parameters to fit features of the voltage trace,rather than the voltage trace itself

Page 10: Biodynamics  2013

Also fit voltage clamp data

0 0.2 0.4 0.6 0.8 1 1.2 1.4 1.6 1.8 2-100

0

100

200

300

400

500

600

I(pA

)

0 0.2 0.4 0.6 0.8 1 1.2 1.4 1.6 1.8 2-150

-100

-50

0

50

100

V(m

V)

time(sec)

Maximize where

Page 11: Biodynamics  2013

Optimization using a genetic algorithm

p1

p2

p1

p2

p1

p2

repeat

selection

replication with mutation

Page 12: Biodynamics  2013

Cost < $ 1000

We need rapid calibration, so use a Programmable Graphics Processing Unit (GPU)

Page 13: Biodynamics  2013

Feature planes can be rapidly computed

100x100 grid10,000 simulations

Simulation time=70 sec eachTotal computation time=20 sec

Page 14: Biodynamics  2013

0 2 4 6 8 10

-60

-50

-40

-30

-20

-10

time (s)

V (m

V)

Example: Calibrate, predict, and test

The model (red) is fit to a bursting Gh4 cell (black)

Page 15: Biodynamics  2013

gBK

BK

Peaks per Event

0 1 2 3 4 5

2

4

6

8

10

1

2

3

4

5

Feature plane for BK conductance and time constant

Best fit to bursting data Block BK current

Page 16: Biodynamics  2013

0 2 4 6 8 10-70

-60

-50

-40

-30

-20

-10

0

10

time (s)

V (m

V)

BK current blocked in cell with paxillin

Actual cell (black) and model (red) convert from bursting to spiking

Page 17: Biodynamics  2013

gBK

BK

Peaks per Event

0 1 2 3 4 5

2

4

6

8

10

1

2

3

4

5

Feature plane for BK conductance and time constant

Best fit to bursting data Double BK time constant

Page 18: Biodynamics  2013

The Dynamic Clamp: a tool for adding a model current to a real cell

Page 19: Biodynamics  2013

0 2 4 6 8 10-70

-60

-50

-40

-30

-20

-10

0

10

time (s)

V (m

V)

BK current added via D-clamp, with τBK=10 ms

Adding BK current with slow activation converts bursting to spiking

Black=cell

Red=model

Page 20: Biodynamics  2013

gBK

BK

Peaks per Event

0 1 2 3 4 5

2

4

6

8

10

1

2

3

4

5

Feature plane for BK conductance and time constant

Best fit to bursting data Increase BK conductance

Page 21: Biodynamics  2013

0 2 4 6 8 10

-60

-50

-40

-30

-20

-10

time (s)

V (m

V)

BK conductance added to a bursting cell

Bursting persists, with more spikes per burst

Black=cell

Red=model

Page 22: Biodynamics  2013

Prediction: Reducing K(dr) conductance increases the burstiness

Diameter: active phase durationColor: number of spikes per active phase

Teka et al., J. Math. Neurosci., 1:12, 2011

Page 23: Biodynamics  2013

Prediction tested using D-clamp

Control cell

Subtract some K(dr) current

Subtract more K(dr)current

Summary

Bertram et al., in press

Page 24: Biodynamics  2013

The “traditional” approach

Page 25: Biodynamics  2013

Our new approach

Page 26: Biodynamics  2013

Thank you