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    Recent Advances in Cell Culture Technology:Improvements in Biopharmaceutical

    Production and Cost

    International Knowledge Millennium ConferenceOctober 31 - November 2, 2004

    Hyderabad, India

    Howard L. Levine, Ph.D.

    BioProcess Technology Consultants, Inc.

    Acton, MA

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    Biopharmaceutical Products

    Products made by or composed of viable organisms andbiopolymer analogs

    Natural & rDNA Proteins, Hormones, Peptides

    Monoclonal & Polyclonal (natural) Antibodies Antibiotics, Plant & Animal Extracts, Allergens Vaccines, Cell & Gene Therapy

    Human & Xenogenic Cells & Tissues Blood & Blood Derivatives Early recombinant proteins were simple proteins, usually

    replacement products for natural products

    Insulin Human Growth Hormone Alpha Interferon

    Todays recombinant proteins and monoclonal antibodiesare more complex

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    Cost of Manufacturing of Biopharmaceuticals

    Processes are fixed-cost driven

    Manufacturing costs typically 15 25% of COGs

    Basic cGMP background identical to chemical drugs

    Complexity of products results in demanding technicalprocesses and high capital investments

    Factors influencing manufacturing costs

    Process design and plant capacity Operating Strategy

    Equipment and Facilities Costs

    Materials Costs Labor Costs

    Overhead Structure

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    Price and scale are inversely related

    Pric

    e,

    $/g

    Production Scale, kg/yr

    Ref: U. Gottschalk. bioLOGICS USA, 2004

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    Production Hosts Influence Manufacturing Costs

    Bacteria Yeast Insect cells Mammalian cells

    Complex Proteins

    Post-translational modificationsMore complex fermentation

    Relatively high COGs

    Simple proteins

    No post-translational modificationsRelatively simple fermentation

    Generally lower COGs

    Production host will determine

    Quantity of product produced

    Quantity and type of contaminants Post-translational modifications, i.e., glycosylation

    Economics & regulatory issues Compared to microbial fermentation, cell culture systems

    are 50 60 fold less productive per liter

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    Effect of Expression Level on Manufacturing Costs

    Most products in development,

    such as monoclonal antibodies

    (MAb), require mammalian cell

    culture

    Cell culture costs contribute

    approximately 50% of total

    manufacturing costs Expression level is most

    important parameter in

    determining cell culture cost

    Expression level drives required

    bioreactor capacity and overall

    facility size

    0.0

    0.3

    0.5

    0.8

    1.0

    0 4 8 12

    Relative Titer

    RelativeCost

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    World-wide Manufacturing Capacity:

    Today and Future

    0

    500

    1,000

    1,500

    2,000

    2,500

    3,000

    3,500

    2003 2004 2005 2006 2007 2008

    Year

    ReactorVolume('000L)

    Forecast Industry-wide Capacity Top 8 Potential Volume Drivers FailCapacity utilization remains

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    Estimating Capacity Requirements for MAbs

    Total MAb requirements 100 Kg/yr

    Crude MAb (60% overall yield) 167 Kg/yr

    Total cell culture (0.5 g/L expression) 0.33 M L/yr

    Estimated batch size (25 batches/yr) 13,000 L

    Each MAb requires approximately one 15,000 Lbioreactor to meet market demand

    Increase in expression level to 2 g/L lowers requirement

    to 3,500 L bioreactor per product or 7 batches per year

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    Cost Implications of Process Optimisation

    0

    40

    80

    120

    160

    200

    0.1 0.3 0.6 1.9 2.8

    Product Titre (g/L)

    Num

    berofBatches

    Required

    0%

    20%

    40%

    60%

    80%

    100%

    RelativeFermentatio

    n

    Cost%

    2000L scale 5000L Scale Cost

    Assumptions:

    Product Requirement:35 kg/yr

    65% overall yield

    Ref: Lonza GS brochure, 2004

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    Historical and Projected Expression Levels

    0

    2,500

    5,000

    7,500

    10,000

    12,500

    15,000

    1975 1985 1995 2005 2015

    Year

    Expressio

    nLevel,mg/L

    10 100

    10,000

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    Can Expression Levels be Increased?

    MAb expression levels have increased significantly over timefrom less than 100 mg/L in 1975 to greater than 3 g/L today

    Predicted yields of >10 g/L within the next decade

    Ref: G. Slaff. bioLOGICS USA, 2004

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    Cell Line Development and Production

    Expression Vector Constructionand Transfection of Host Cell

    Selection of individual clones

    Screening for high expression

    Preparation of cell banks for production

    Expansion through growth and dilution

    to produce inoculum for final reactor volume

    Growth to high density and production

    Each step in the process can beoptimized to increase expression

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    Mammalian Protein Expression Vector Features

    Promoter and enhancer drive transcription of desired protein

    CMV promoter commonly used today

    Selectable marker

    Dihydrofolate Reductase (DHFR)

    Native DHFR is duplicated in response to increasing Methotrexate (MTX)

    Technology developed in early 80s uses amplification of DHFR on an

    expression vector to co-amplify gene encoding biopharmaceutical product

    Glutamine Synthetase (GS)

    Improved promoters and enhancers can increase protein expression

    CHEF-1a promoter currently used for some products in clinic

    Ubiquitous Chromatin-opening Elements (UCOE)

    Allows prolonged expression in transfected pools to rapidly generate pre-

    clinical material

    Enables selection of production clone by screening fewer initial clones

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    Improving Clone Selection

    Speed to identification of final high expressing production clone is critical torapid product development

    New strategies for clone selection allow more clones to be analyzed,

    increasing odds of finding the rare high expressing clone

    Certain selectable markers increase percentage of high expressors High throughput screening methods can increase the likelihood that a

    high expressing clone will be found

    Number of Clones Screened

    Titerg/ml

    Ref: B. Adamson, Manupharma, 2004

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    Cell Line Development DHFR

    Steps required for DHFR amplification

    Transfect cells and select in 0.01 0.2 nM MTX

    Identify clone with highest level of transgene expression

    (generally 1 3 pg/cell/day) Dilute isolated clone and reselect in higher MTX level

    Identify clone with highest level of transgene expression (up to12 pg/cell/day)

    Repeat until sufficient transgene expression is obtained

    Amplification of DHFR gene requires 12 weeks per cycle

    and can take up to 5 cycles to obtain a clone with highenough expression for todays biopharmaceuticalproducts

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    Cell Line Development GS

    Glutamine synthetase can be used to more rapidly

    select high expressing cell lines without amplification

    Ref: Lonza GS brochure, 2004

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    Process Optimization with the GS System

    28294B

    19173B

    5853A

    3342A

    1391A

    Antibody (mg/L)ProcessCell Line

    Ref: Lonza GS brochure, 2004

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    CHEF-1 Vector for Improved Expression

    Expression vector uses the homologous Chinese hamster EF1- promoter CHEF1 promoter permits rapid isolation of highly productive cell lines

    Intrinsic expression in CHO cells significantly higher than CMV promoter

    Time required for cell line development reduced by 6 - 12 monthscompared to methods that utilize gene amplification

    Low number of integrated plasmid copies (10-20) increases genetic stability

    0

    10

    2030

    40

    50

    60

    70

    80

    E1

    E2

    P1-Ig

    P2-Ig

    P3-Ig

    MDC

    MAb-1

    Mab-2

    Titerfrom

    pooledCHO

    transfectants

    (mg/L)

    CMVp

    CHEF1p

    Ref: Icos CHEF-1 brochure, 2004

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    Host Cell Line Improvements

    CHO cell is standard host for most biopharmaceutical productstoday

    Change of cell line not likely for biochemical and regulatory

    reasons Develop CHO host that meets production criteria

    Adapted to growth in suspension Grows in animal-product-free-media

    Addition of genes encoding rate-limiting transcription andtranslation factors (ie, RNA polymerase subunits, specifictRNAs) may increase expression levels

    Improvement in carbohydrate structure and uniform distributionof sugars can improve product function and yields fromdownstream processing

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    Characteristics of a Desirable Process

    [Product] = qp x [cells] x time Maximum specific productivity (qp)

    Maximum cell concentration

    Optimum time

    Robust, reproducible, and scalable

    0

    2

    4

    6

    8

    10

    12

    14

    0 2 4 6 8 10 12 14Days

    VCD(x

    10E6)

    VCD(x

    10E6)/viability(%)

    viability(%)

    0

    200

    400

    600

    800

    1000

    1200

    1400

    1600

    Harvest

    Titer(mg/l)

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    Media Optimization Strategies

    Optimal media for growth and for production must do thefollowing:

    Provide necessary nutrients at appropriate levels and times

    Keep energy source high so energy production is not ratelimiting Buffer to maintain pH within defined process parameters

    Regulations now require that media be free of animal-derived

    components

    Soy media and other plant sources are under evaluation Synthetic media have been developed

    Feed rates for glucose and other nutrients can be optimized Optimization of media and feed strategies can lead to 4 10

    fold increase in protein expression levels from same cell line

    and bioreactor

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    Media Development and Process Optimization

    Ref: B. Adamson. Manupharma, 2004

    bi d i hi ff f d h

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    Erbitux production history: Effect of Feed Changes

    Process 1

    300 mg/L

    Used for initial clinical trials through Phase 2

    Process 2

    Change feed strategy and optimize media

    600 mg/L

    Used for Phase 3 and commercial launch

    Process 3

    Currently introducing new feed strategy that enablesproduction at level of >1 g/L from same initial cell line

    To be implemented as post-approval changes

    Ref: G. Pendse, BioProcess International, 2004

    C l i

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    Conclusions

    Increasing expression level decreases manufacturing

    cost and facility requirements

    There are multiple approaches to increasing expression

    levels Intrinsic methods such as vector design and host cell

    line development

    Extrinsic methods such as media selection andprocess optimization

    Expression levels for monoclonal antibodies today are

    typically in the 1 3 g/L range

    Expression levels of >10 g/L are predicted in the next

    decade

    Th k !

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    Thank you!

    BioProcess Technology Consultants, Inc.

    289 Great Road, Suite 303

    Acton, MA 01720

    978.266.9153 (phone)

    978.266.9152 (fax)[email protected]

    www.bioprocessconsultants.com