abscisic acid rescues the root meristem defects of the ...both bacterial and plant nodule-expressed...

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Abscisic acid rescues the root meristem defects of the Medicago truncatula latd mutant Yan Liang, David M. Mitchell, Jeanne M. Harris Department of Plant Biology, University of Vermont, Burlington, VT 05405-0086, USA Received for publication 3 August 2006; revised 1 December 2006; accepted 15 December 2006 Available online 21 December 2006 Abstract The LATD gene of the model legume, Medicago truncatula, is required for the normal function of three meristems, i.e. the primary root, lateral roots and nitrogen-fixing nodules. In latd mutants, primary root growth eventually arrests, resulting in a disorganized root tip lacking a presumptive meristem and root cap columella cells. Lateral root organs are more severely affected; latd lateral roots and nodules arrest immediately after emerging from the primary root, and reveal a lack of organization. Here we show that the plant hormone, abscisic acid (ABA), can rescue the latd root, but not nodule, meristem defects. Growth on ABA is sufficient to restore formation of small, cytoplasm-rich cells in the presumptive meristem region, rescue meristem organization and root growth and formation of root cap columella cells. In contrast, inhibition of ethylene synthesis or signaling fails to restore latd primary root growth. We find that latd mutants have normal levels of ABA, but exhibit reduced sensitivity to the hormone in two other ABA-dependent processes: seed germination and stomatal closure. Together, these observations demonstrate that the latd mutant is defective in the ABA response and indicate a role for LATD-dependent ABA signaling in M. truncatula root meristem function. © 2006 Elsevier Inc. All rights reserved. Keywords: Abscisic acid; Root cap; Meristem; Medicago truncatula; Hormone signaling; LATD; NIP; Lateral root; SICKLE; Ethylene Introduction Post-embryonic plant development is derived almost entirely from cells produced by meristems, regions of stem cells gene- rating populations of undifferentiated precursor cells that subsequently differentiate to form all the tissues of the root or shoot. Although the shoot apical meristem (SAM) and the root apical meristem (RAM) have distinct genetic control and morphological organization, they share a capacity for indeter- minate growth and the ability to respond to altered environ- mental conditions (Irish and Jenik, 2001; Veit, 2004, 2006). Since most of the plant forms postembryonically, environmental inputs have the ability to modify plant architecture (Malamy, 2005; McSteen and Leyser, 2005). Such developmental plasticity is essential to the success of the plant, which is rooted to the spot where it germinated and must alter its development and physiology to accommodate changing environmental conditions. Hormones function to coordinate organismal responses to the environment and to regulate meristem function. In the root system, auxin specifies meristem cell fates, patterns the root tip, and promotes lateral root initiation (Sabatini et al., 1999; Thimann, 1936). Cytokinin functions to limit root meristem size and activity (Werner et al., 2001). Abscisic acid (ABA), long known for its role in mediating responses to environmental stresses such as drought, cold, and high salinity, has increas- ingly been implicated in the regulation of meristem fate and activity. In the shoot, ABA regulates the outgrowth of axillary buds (Knox and Wareing, 1984; Pei et al., 1998), inhibits stolon outgrowth in potato tubers (Xu et al., 1998) and the growth of intercalary meristems in rice (Hoffmann-Benning and Kende, 1992), and regulates the fate of shoot meristems (heterophylly) in certain aquatic plants (Minorsky, 2003). Recently, genetic studies of the ERA1 gene in Arabidopsis have identified a role for ABA signaling in the SAM (Bonetta et al., 2000). In Developmental Biology 304 (2007) 297 307 www.elsevier.com/locate/ydbio Corresponding author. Fax: +1 802 656 0440. E-mail addresses: [email protected] (Y. Liang), [email protected] (D.M. Mitchell), [email protected] (J.M. Harris). 0012-1606/$ - see front matter © 2006 Elsevier Inc. All rights reserved. doi:10.1016/j.ydbio.2006.12.037

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Page 1: Abscisic acid rescues the root meristem defects of the ...both bacterial and plant nodule-expressed genes and do not fix nitrogen (Bright et al., 2005; Veereshlingam et al., 2004)

04 (2007) 297–307www.elsevier.com/locate/ydbio

Developmental Biology 3

Abscisic acid rescues the root meristem defects of theMedicago truncatula latd mutant

Yan Liang, David M. Mitchell, Jeanne M. Harris ⁎

Department of Plant Biology, University of Vermont, Burlington, VT 05405-0086, USA

Received for publication 3 August 2006; revised 1 December 2006; accepted 15 December 2006Available online 21 December 2006

Abstract

The LATD gene of the model legume, Medicago truncatula, is required for the normal function of three meristems, i.e. the primary root, lateralroots and nitrogen-fixing nodules. In latd mutants, primary root growth eventually arrests, resulting in a disorganized root tip lacking apresumptive meristem and root cap columella cells. Lateral root organs are more severely affected; latd lateral roots and nodules arrestimmediately after emerging from the primary root, and reveal a lack of organization. Here we show that the plant hormone, abscisic acid (ABA),can rescue the latd root, but not nodule, meristem defects. Growth on ABA is sufficient to restore formation of small, cytoplasm-rich cells in thepresumptive meristem region, rescue meristem organization and root growth and formation of root cap columella cells. In contrast, inhibition ofethylene synthesis or signaling fails to restore latd primary root growth. We find that latd mutants have normal levels of ABA, but exhibit reducedsensitivity to the hormone in two other ABA-dependent processes: seed germination and stomatal closure. Together, these observationsdemonstrate that the latd mutant is defective in the ABA response and indicate a role for LATD-dependent ABA signaling in M. truncatula rootmeristem function.© 2006 Elsevier Inc. All rights reserved.

Keywords: Abscisic acid; Root cap; Meristem; Medicago truncatula; Hormone signaling; LATD; NIP; Lateral root; SICKLE; Ethylene

Introduction

Post-embryonic plant development is derived almost entirelyfrom cells produced by meristems, regions of stem cells gene-rating populations of undifferentiated precursor cells thatsubsequently differentiate to form all the tissues of the root orshoot. Although the shoot apical meristem (SAM) and the rootapical meristem (RAM) have distinct genetic control andmorphological organization, they share a capacity for indeter-minate growth and the ability to respond to altered environ-mental conditions (Irish and Jenik, 2001; Veit, 2004, 2006).Since most of the plant forms postembryonically, environmentalinputs have the ability to modify plant architecture (Malamy,2005; McSteen and Leyser, 2005). Such developmentalplasticity is essential to the success of the plant, which is

⁎ Corresponding author. Fax: +1 802 656 0440.E-mail addresses: [email protected] (Y. Liang),

[email protected] (D.M. Mitchell), [email protected](J.M. Harris).

0012-1606/$ - see front matter © 2006 Elsevier Inc. All rights reserved.doi:10.1016/j.ydbio.2006.12.037

rooted to the spot where it germinated and must alter itsdevelopment and physiology to accommodate changingenvironmental conditions.

Hormones function to coordinate organismal responses tothe environment and to regulate meristem function. In the rootsystem, auxin specifies meristem cell fates, patterns the root tip,and promotes lateral root initiation (Sabatini et al., 1999;Thimann, 1936). Cytokinin functions to limit root meristem sizeand activity (Werner et al., 2001). Abscisic acid (ABA), longknown for its role in mediating responses to environmentalstresses such as drought, cold, and high salinity, has increas-ingly been implicated in the regulation of meristem fate andactivity. In the shoot, ABA regulates the outgrowth of axillarybuds (Knox and Wareing, 1984; Pei et al., 1998), inhibits stolonoutgrowth in potato tubers (Xu et al., 1998) and the growth ofintercalary meristems in rice (Hoffmann-Benning and Kende,1992), and regulates the fate of shoot meristems (heterophylly)in certain aquatic plants (Minorsky, 2003). Recently, geneticstudies of the ERA1 gene in Arabidopsis have identified a rolefor ABA signaling in the SAM (Bonetta et al., 2000). In

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addition, analysis of the ABI8 gene indicates a role in theregulation of cell division in the RAM (Brocard-Gifford et al.,2004). Finally, analysis of ABA deficient mutants points to arole for ABA in root growth in the absence of water stress(Koornneef et al., 1982; Deak and Malamy, 2005).

The plant root system is formed from a single primary rootwhich forms lateral branches. This simple unit of a lateralbranch is repeated over and over to create the root system. Thus,root architecture is modified by regulating the position andlength of lateral roots. Unlike most plant organs, which aregenerated by meristems, lateral roots are initiated by divisionsof pericycle cells opposite xylem poles in mature regions of theroot (Malamy and Benfey, 1997). Continued divisions result inthe formation of a lateral root primordium, which subsequentlyemerges in a process controlled largely by cell expansion. Onlyafter emergence from the parent root is the meristem activated,and meristem activity controls all further growth of the lateralroot (Malamy and Benfey, 1997). Once formed, the lateral rootmeristem resembles the primary root meristem in bothorganization and function. Therefore, it is likely that primaryand lateral roots share a common mechanism for apicalmeristem function.

ABA has been shown to play an important role in theregulation of lateral root formation. In Arabidopsis, ABAinhibits lateral root formation at two different steps: 1) transitionfrom primordium to emerged lateral root with an inactivemeristem (Deak and Malamy, 2005) and 2) activation of thelateral root meristem (De Smet et al., 2003). In contrast,legumes exhibit an opposite response to ABA: namely,stimulation of lateral root development (Liang and Harris,2005). Thus, the importance of ABA in regulating lateral rootformation has been conserved across higher plants, but theresponse of lateral roots to ABA has not. Since ABA plays a keyrole in coordinating the responses of plants to environmentalstresses such as drought, osmotic stress, salt stress and chilling(Finkelstein et al., 2002), the regulation of lateral root formationby ABA provides one of the first links between environmentalconditions and control of root architecture. The difference in theresponse of legume and non-legume lateral roots to ABA iscorrelated with the ability to form nitrogen-fixing root nodules.Thus, identification of genes required for transduction of theABA signal in legume lateral roots may help elucidate thechanges in root development and physiology necessary toaccommodate a rhizobial endosymbiont.

The lateral root organ defective (latd) mutant of Medicagotruncatula is deficient in the growth of three types of meristems:that of the primary root, lateral roots and symbiotic root nodules(Bright et al., 2005). Although latd seedlings appear wild-typeat germination, post-germination root development is not wild-type: the primary root grows slowly, root hairs are short andsparse, the root tip becomes increasingly abnormal and by22 days growth ceases entirely. Formation of lateral root organsis even more severely affected. M. truncatula is a legume, andthus its roots form two different lateral organs: lateral roots andsymbiotic root nodules. Unlike the primary roots, most latdlateral roots never exhibit a period of growth, but rather arrestsoon after emergence from the parent root with a highly

disorganized root tip resembling arrested primary roots (Brightet al., 2005). Similarly, latd nodules arrest around the time ofemergence from the primary root. Nodules exhibit limitedinfection by Rhizobium bacteria, fail to induce expression ofboth bacterial and plant nodule-expressed genes and do not fixnitrogen (Bright et al., 2005; Veereshlingam et al., 2004).

Here we report that ABA specifically rescues the short rootphenotype of latd mutants and restores meristem organizationand function of both primary and lateral root meristems, as wellas formation of the root cap. In contrast, inhibition of ethylenesynthesis or signaling, either pharmacologically or genetically,has no effect on latd root length. We further demonstrate thatlatd mutants synthesize wild-type levels of ABA, but exhibitreduced sensitivity to the hormone for both seed germinationand stomatal closure. These data are consistent with a model inwhich the LATD gene is required for ABA signaling in leaves,roots and seeds. Furthermore, our results indicate a major rolefor ABA signaling and LATD gene activity in the function oflegume lateral root meristems.

Materials and methods

Plant material and growth conditions

M. truncatula seeds were scarified in concentrated sulfuric acid for 10 min,rinsed thoroughly with sterile water and sterilized in 30% Clorox (equivalent to2% sodium hypochlorite) for 10 min, then washed thoroughly with sterile water.Following surface sterilization, seeds were imbibed in sterile water for 3 h,shaking at room temperature. Seeds were germinated in the dark at roomtemperature in a damp, inverted Petri dish sealed with parafilm. Aftergermination, seedlings were transferred to 25 cm×25 cm Petri dishes (Nunc;Roskilde, Denmark) containing buffered nodulation medium (BNM) at pH 6.5(Ehrhardt et al., 1992). Plates were sealed with surgical tape (1535-1; 3MHealthCare, St. Paul, MN), and were placed at a near vertical position in a Convirongrowth chamber (model MTR30; Winnipeg, Manitoba). Growth chambers werekept at 20 °C, 16 h light, 8 h dark, with a light intensity of 195 μE m−2 s−1 and50% humidity.

Arabidopsis thaliana seeds were surface sterilized in the same way as M.truncatula, but not scarified. A. thaliana seeds were evenly distributed on platescontaining BNM medium. A. thaliana seeds were placed at 4 °C in the dark fortwo days, then transferred to continuous cool light at an intensity of100 μE m−2 s−1 at room temperature to promote synchronous germination.After germination, seeds were transferred to magenta boxes containing the samemedium and moved to the growth chamber.

For ABA treatment, (±)-ABA (A1049; Sigma, St. Louis, MO) was added tothe medium at the specified concentration before autoclaving. Aminoethox-yvinyl-glycine (AVG) (A1284; Sigma) was added to the medium afterautoclaving.

Root tip sections

Semithin sections (1 μm) of 24-day-old root tips grown on BNM mediumwith or without additional ABAwere cut and stained with methylene blue-azureII as previously described (Bright et al., 2005).

Bacterial growth conditions and assays

All strains used in this study are isogenic with Sinorhizobium melilotiRm1021, and were grown at 30 °C in Luria–Bertani (LB) mediumsupplemented with appropriate antibiotics. Plants growing on BNM plateswere flood-inoculated with Rm1021 in 10 mM magnesium sulfate 3 days afterplating, as previously described (Bright et al., 2005), and nodules scored at24 days post-inoculation.

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Analysis of rhizobial growth rate and nodF–GUS assays (Demont et al., 1993)were performed as described previously (Sun et al., 2006). In planta expression ofthe rhizobial nex1 gene was assayed by growing plants on BNM agar with orwithout ABA and inoculating with S. meliloti strain SN66, containing atranscriptional nex1∷uidA fusion (Oke and Long, 1999; Oke, personal commu-nication), as previously described (Bright et al., 2005). Nodules at the top of theinoculation zone were excised 24 days post-inoculation and stained according toSwanson et al. (1993).

Starch staining

Starch granules in the root cap columella cells were stainedwith Lugol solutionas described previously (Fukaki et al., 1998). Briefly, seedlings were stained for1min, then rinsedwithwater. Root tipsweremounted on slides in 50%glycerol andsealed. Samples were observed and photographed using DIC microscopy.

ABA measurement

For the quantification of endogenous ABA levels in M. truncatula andArabidopsis seedlings, plants were grown in magenta boxes containing BNMmedium for 5 weeks in a growth chamber. Seedlings were harvested, weighed,frozen in liquid nitrogen and stored at −80 °C until extraction. ABA wasextracted following a procedure adapted from Walker-Simmons (1987).Seedlings were placed in a mortar containing liquid nitrogen and ground to afine powder using a pestle. Powdered tissue was suspended in methanolcontaining 2.5 mM citric acid monohydrate and 0.5 mM butylated hydro-xytoluene at a ratio of 10 mg tissue per 1.5 ml of methanol solution. A knownamount of standard (+) cis/trans-ABA (A4906; Sigma) was added to half of thesample to determine the recovery ratio. The extract was then stirred for 36 h inthe dark at 4 °C and centrifuged at 1500×g for 15 min at 4 °C. The supernatantswere recovered and adjusted to 70% methanol, and passed through a C18 Sep-Pak cartridge (Waters). The eluates were dried, re-suspended in TBS (Tris-buffered saline), and diluted as described (Walker-Simmons, 1987). The ABAconcentration was measured with an ABA ELISA kit (PGR-1; Sigma). Theoverall recovery of (+) cis/trans-ABA was expressed as the difference of theABA concentration between the sample containing the additional ABA standardand the sample without the standard, divided by the amount of ABA added. Therecovery ratio for our three experiments was 80%. The standard error of themean (SEM) was calculated from three replicate samples.

Stomatal closure assay

Leaves of 5-week-old wild-type and latd M. truncatula plants wereincubated in white light (100 μmol m−2 s−1) for 2.5 h in stomatal openingsolution, containing 5 mM KCl, 50 μM CaCl2, and 10 mM MeS, pH 5.6 (Trejoet al., 1993, 1995), and for an additional 3 h in the solution with or without10 μMABA. After treatment, epidermal peels were taken from the main veins ofthe abaxial side and mounted in the same buffer as the treatment. Stomata werephotographed with an inverted Microscope (Nikon Eclipse TE2000). Stomatalapertures were measured in the focal plane of the inner edges of guard cells inepidermal strips. Average stomatal aperture ratios (pore width/length) weredetermined from measurements of 30 stomata per treatment.

Seed germination assay

Germination assays were performed with growth chamber-grown seeds of asimilar age. Seeds were incubated overnight in the dark at room temperature in adamp, inverted Petri dish sealed with parafilm in order to break any residualdormancy. Seeds were then transferred to BNM medium containing 0.8% (w/v)agar supplemented with different concentrations of ABA (0, 1, 3, 10 and 30 μM).The germination assay was scored 5 days after plating. Each value represents theaverage percent germination of 100 seeds± the SEM of two replicates.

Creation of the latd skl double mutant

latd skl double mutants were constructed by first crossing latd and sklhomozygotes. Skl-looking F2 progeny were allowed to self-fertilize. Phenoty-

pically latd individuals segregating from these F2 progeny were grownindividually. Unlike latd homozygotes, few of these individuals survived toadulthood. To confirm the presence of the skl mutation, we amplified the regionof the SKL gene containing the skl polymorphism (Penmetsa and Cook,personal communication). To confirm the presence of the latdmutation, putativelatd skl double mutants were crossed to latd homozygotes, and the resulting F1progeny all had the latd phenotype. latd skl double mutants were recovered inthe progeny of this cross by following the presence of the skl polymorphism.Two of these individuals survived to adulthood and were fertile. Progeny ofthese individuals were used for all experiments.

Statistical analysis

Fisher's least significant difference test was conducted to perform multiplecomparisons for determining which mean scores were significantly different.MINITAB 14 was used for all statistical analyses.

Results

ABA rescues the latd primary root meristem

The latd mutation appears to disrupt both nodule and rootdevelopment (Bright et al., 2005). Hormones play animportant role in regulating plant growth and development;therefore, we attempted to rescue the latd root growth defectsby altering the hormone balance. We grew newly germinatedlatd mutants on agar medium supplemented with 0, 0.1, 1, 10or 100 μM naphthalene acetic acid, gibberellic acid (GA3),AVG, 1-aminocyclopropane-1-carboxylic acid (ACC), benzy-ladenine or ABA. We found that only addition of ABA rescuesthe root growth defects of latd mutants (data not shown). Theaddition of increasing concentrations of ABA in the mediumresults in the growth of primary and lateral roots thatincreasingly resemble wild-type (Fig. 1A). At a concentrationof 10 μM ABA, latd mutant plants form roots that appearcompletely rescued: roots have a white color like wild-typeroots (unlike the brown color of latd roots on unsupplementedmedium), form a longer primary root and develop longer lateralroots that resemble those of wild-type (A17) plants grown in thesame conditions (Figs. 1A, B). Primary roots of latd plantsgrown in the absence of ABA arrest growth at 22 days (Bright etal., 2005). To determine whether the ABA treatment had merelycaused the latd roots to grow more quickly before growth arrest,or whether it actually prevented the meristem arrest at 22 days,we measured the growth rate of the primary root from day 22 today 34. As shown in Fig. 1C, 10 μMABA increases the growthrate of latdmutant roots to that of wild-type plants grown on thesame conditions. Since 10 μM ABA gives the most completerescue of the latd root phenotype, while not inhibiting otheraspects of plant development, all subsequent experiments werecarried out at this concentration.

Primary root growth is the result of increased cell numberdue to cell proliferation in the meristem and increased cell sizedue to cell expansion in the elongation zone (Nakajima andBenfey, 2002). Previously, we showed that the cessation of latdprimary root growth is correlated with a disorganized meristem,elongation zone and root cap (Bright et al., 2005). Therefore, wewondered whether ABA might increase the growth rate of latdprimary roots by rescuing meristem organization and function.

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Fig. 1. Rescue of latd primary root growth and root tip organization by the addition of ABA. Plants (A) and primary root length (B) of 24-day-oldM. truncatula wild-type (A17) and latdmutants grown on buffered nodulation medium (BNM) agar supplemented with 0, 0.01, 0.1, 1 and 10 μMABA. (C) Primary root growth rate from22 to 34 days. Root tip (D) and longitudinal sections of the root tip including the root apical meristem and root cap (E). (F) Lugol-stained root tip for starch granules.Plants (C–F) were grown on BNM agar medium with or without 10 μMABA. Plants (A–B, D–F) were assayed at 24 days. The scale bars represent 1 cm (A), 0.5 mm(D) and 10 μm (E, F). Values shown in panels B and C are the mean±SEM from samples composed of 15 seedlings each. Different letters represent a statisticallysignificant difference at the 0.05 level. Experiments were repeated one to two times.

300 Y. Liang et al. / Developmental Biology 304 (2007) 297–307

In addition to promoting cell division, meristems locally inhibitdifferentiation of surrounding cells. In latd mutants, differ-entiated cells are found close to the root tip (Bright et al.,2005). If ABA restores meristem function, we would expect tosee the distance between the first root hair and the root tiplengthen. We observed that ABA not only rescues the abnormallatd root tips, but also increases the distance between the RAMand the first root hair (Fig. 1D). In order to assess the effect ofABA on meristem organization, we examined longitudinalsections of 24-day-old root tips (Fig. 1E). We found that 10 μM

ABA does not affect the overall organization of the RAM ofwild-type plants, although treated roots are narrower and forma smaller region of iodine-staining cells in the root cap. Incontrast, ABA application completely rescues the disorganiza-tion of the latd RAM, restoring a wild-type morphology withorganized cell files ending at apparent initial cells surroundinga putative quiescent center (QC) (Fig. 1E). ABA also appearsto rescue the aberrant root cap of latd mutants, resulting in thereappearance of amyloplasts in elongated columella cells,surrounded by cells with characteristics of lateral root cap (Fig.

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1F). Together, these results indicate that the addition of ABArescues the morphology and organization of the latd mutantRAM and root cap. The rescue of latd mutant roots by ABAoccurred whether or not the plants were inoculated with Rhi-zobia (data not shown). ABA inhibits nodule formation at thehigher concentrations tested (1 and 10 μM) and lowerconcentrations do not rescue the nodule development defect(see Supplementary data).

Fig. 2. Rescue of latd lateral root growth and root tip organization by the addition of Aof ABA on the density of emerged (<2 mm long) and elongating (>2 mm long) laternumber of lateral roots per cm of primary root. Longitudinal sections of wild-type anmount Lugol-stained root tips indicating the presence of starch granules (E). All planValues shown in panels A and C are the mean±SEM from samples composed of 15 se0.05 level. Experiments were repeated one to two times. The scale bars represent 0.

ABA rescues latd lateral root growth and morphology

By far the most striking effect of exogenous ABA on latdmutants is the rescue of the lateral root defect. latd lateral rootsarrest immediately after emerging from the parent root withshort lateral root length, however, in the presence of 10 μMABA, latd lateral roots grow to the same length as that of wildtype plants grown under the same conditions (Figs. 2A, B).

BA. 10 μMABA rescues lateral root length (A) and appearance (B). (C) Effectal roots in wild-type (A17) and latd plants. Lateral root density is defined as thed latd root tips including the root apical meristem and root cap (D), and wholets were grown for 24 days on BNM agar medium with or without 10 μM ABA.edlings each. Different letters represent a statistically significant difference at the5 mm (B) and 10 μm (D, E).

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Fig. 3. Rescue of the latd root hair defect. (A) Root hairs ofM. truncatulawild-type(A17) and latd plants grown on BNM agar medium supplemented with 0 or 10 μMABA. Photographs were taken from the region 1 to 2 cm above the root tip. Thescale bar represents 100 μm. (B) Average root hair length. Two root hairs (visiblefrom base to tip) were measured on each root. Values are the mean±SEM fromsamples composed of 15 seedlings each. Experiments were repeated two times.Different letters represent a statistically significant difference at the 0.05 level.

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Lateral root development is regulated at multiple stages in Ar-abidopsis: initiation, primordium formation and activation ofthe lateral root meristem (De Smet et al., 2003; Deak andMalamy, 2005; Malamy and Benfey, 1997). We observed thatlatd mutants have a high number of lateral roots that have justemerged from the parent root, and a very low number ofelongating roots (Fig. 2C). Growth on 10 μM ABA alters theratio of emerged to elongating lateral roots, such that the densityof elongating roots now approaches that of wild-type grown inparallel. Interestingly, in ABA-treated roots, the number ofemerged roots decreases, coincident with the increase inelongating roots, such that the total number of emerged pluselongating lateral roots is now very similar to that of wild-type.

In order to examine the effect of ABA on the organization ofthe latd lateral root tip, we made longitudinal sections of lateralroots grown in the presence or absence of ABA (Fig. 2D). Asfor the primary root meristem, we found that addition of 10 μMABA led to the restoration of organized cell files and a pre-sumptive QC in latd mutant lateral roots. We also observed thereappearance of differentiated columella cells, as monitored byiodine staining of starch granules (Fig. 2E).

ABA rescues latd root hair growth

Under standard growth conditions, latd mutants have short,sparse root hairs (Bright et al., 2005). We observed that thisphenotype is rescued when latd plants are grown on mediumsupplemented with 10 μMABA (Fig. 3A). In order to determinethe extent of rescue, we measured root hair length of plantsgrown on medium with or without 10 μM ABA. As shown inFig. 3B, ABA inhibits root hair length of wild-type plants about10%, whereas the length of latd root hairs is increased by 50%.Consequently, the length of latd root hairs is not significantlydifferent from wild-type on 10 μM ABA. Thus, 10 μM ABA issufficient to rescue the root hair growth defect of latd mutants.

latd mutants have normal levels of endogenous ABA

The rescue of the latd root defects by exogenous ABAsuggests that latd mutants may have defects in ABA synthesisor exhibit reduced sensitivity to ABA. If latd mutants are ABA-deficient, adding ABA to the medium may compensate for lowconcentrations of ABA in the tissue and rescue latd phenotypes.If latd mutants have reduced sensitivity to ABA, addingexogenous ABA to the medium may stimulate signaling enoughto resemble the normal endogenous ABA concentration for latdplants and consequently rescue latd mutant defects. To dis-tinguish between these two possibilities, we measured theendogenous levels of ABA in 5-week-old wild-type and mutantseedlings. We found that latd mutant plants contain comparablelevels of ABA to wild-type. As a control, we examined ABAlevels in the ABA-deficient aba2-1 mutant of Arabidopsis(Léon-Kloosterziel et al., 1996). As shown in Fig. 4, aba2-1mutants have a 72% reduction of endogenous ABA levelscompared with wild-type Arabidopsis, which is comparable tothe reported value, indicating that this method is able to detectABA deficiency (Léon-Kloosterziel et al., 1996).

latd mutants exhibit reduced sensitivity to ABA-inducedstomatal closure and inhibition on seed germination

Our results indicate that latd mutants are not ABA-deficient,but rather suggest that theymay have reduced sensitivity to ABA,or that ABA may bypass another physiological defect. If latdplants have reduced sensitivity to ABA, we would predict thatthey might also have defects in additional ABA-inducedphysiological responses, such as stimulation of stomatal closureand inhibition of seed germination (Finkelstein et al., 2002;McAinsh et al., 1990). To determine whether latd mutants havereduced sensitivity to ABA-induced stomatal closure, we floatedexcised leaves in an opening buffer for 2.5 h to promote stomatalopening. After incubation, we transferred the leaves to the samesolution with or without 10 μM ABA. Epidermal peels wereexamined with light microscopy to observe the stomatal features.Stomatal aperture was determined by directly measuring the ratioof pore width to length. We observed a 26% reduction of stomatalaperture in latd mutant leaves treated with ABA, whereas wild-type leaves exhibited a significant stomatal closure (98%) inresponse to ABA (Figs. 5A, B). This observation suggests thatlatd mutants have decreased sensitivity to ABA for stomatalclosure, but that the response is not completely eliminated.

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Fig. 5. latd mutants are resistant to the effect of ABA on both stomatal closureand seed germination. (A) Individual stomata of wild-type and latd. Leavesof 5-week-old wild-type and latd mutant plants were floated in a stomatalopening solutionwith orwithout 10μMABAfor 3 h inwhite light. Epidermal peelsof the leaves were mounted and photographed. The scale bar represents 10 μm. (B)Average stomatal aperture ratios (pore width/length). Data are the average of 3independent experiments. 3–5 leaveswere examined and a total of 30 stomata werecounted for each treatment. Values represent the mean±SEM. Different lettersrepresent a statistically significant difference at the 0.05 level. (C) Germination ofwild-type and latd seeds in the presence of ABA. Seeds were plated on BNM agarwith increasing concentrations of ABA, and the percentage of germinated seedsscored 5 days after plating. Values are the mean±SEM from samples composed of50 seeds each. Data are the average of 2 independent experiments.

Fig. 4. latd mutant seedlings have wild-type levels of ABA. ABAwas extractedfrom 5-week-old Arabidopsis andM. truncatula plants grown on BNMmediumin Magenta boxes. Wild-type Arabidopsis plants, Columbia (Col-0), and theABA-deficient mutant, aba2-1, were used as controls. Different letters representa statistically significant difference at the 0.05 level. Experiments were done intriplicate. Error bars represent SEM.

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In order to determine whether latd mutants have reducedsensitivity to ABA for inhibition of seed germination, we testedgermination of wild-type and latd seeds in the presence ofvarying concentrations of ABA. As shown in Fig. 5C, thepercentage of seed germination for both wild-type and latdmutants is near 100% without ABA treatment. Five days afterplating on medium containing 3 μM ABA, latd seeds exhibit65% seed germination; in contrast, only 9% of wild-type seedsgerminated. At 10 μM ABA, germination of wild-type seedswas completely inhibited, whereas 10% of latd mutant seedsstill germinated.

The root phenotypes of latd mutants are not rescued byinhibiting ethylene signaling

The stimulatory effects of ABA on plant growth have beenproposed to be the result of relieving ethylene inhibition of rootelongation. Consequently, mutations disrupting ethylene sig-naling can suppress the root growth defects of ABA signaling orsynthesis mutants (Beaudoin et al., 2000; Cheng et al., 2002;Ghassemian et al., 2000; Sharp and LeNoble, 2002; Sharp et al.,2000). Based on this model, we would predict that the ABA-insensitive latd mutant would be rescued by inhibiting ethylenesignaling. To test this prediction, we introduced the sickle (skl)mutation causing ethylene-insensitivity (Penmetsa and Cook,1997) into the latd background. We examined the rootphenotypes of these latd skl double mutants and found thattheir primary root length is indistinguishable from that of latdhomozygotes, and does not resemble the long root characteristicof skl mutants (Fig. 6A). This result was further supported bythe observation that the latd root phenotypes are not rescued byaddition of the ethylene biosynthesis inhibitor, AVG (Fig. 6B).

Discussion

In this study, we demonstrate that the latd primary and lateralroot meristem defects can be rescued by the addition of ABA,restoring both root growth and meristem organization. Wefurther show that latd plants have wild-type levels of endo-

genous ABA, but exhibit reduced sensitivity to the effect ofABA on stimulation of both stomatal closure and inhibition ofseed germination, indicating that the latd defect is in theresponse to ABA, not its synthesis. These data point to theexistence of a LATD-dependent ABA signaling pathway inlegume roots, seeds and shoots.

ABA is required for activity of root meristems

The hypothesis that ABA promotes normal plant growth issupported indirectly by the small and stunted stature of ABA-

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Fig. 6. The root phenotypes of latd mutants are not rescued by inhibitingethylene signaling or synthesis. (A) A representative latd skl double mutantcompared with parental wild-type and both single mutants. Mutant alleles ofLATD and SKL are indicated by (−), wild-type alleles by (+). (B) Mean primaryroot length of the mutants shown in panel A. (C) Representative wild-type andlatd plants grown with or without 1 μMAVG. The presence of AVG is indicatedby a (+), the absence by (−). Presence of the latd mutation is indicated as forpanel A. (D) Mean primary root length of the mutants shown in panel C. Allplants were grown on BNM agar for 12 days. (B, D) Graphs represent the meanprimary root length±SEM from samples composed of 15 seedlings each.Different letters represent a statistically significant difference at the 0.05 level.The scale bar represents 1 cm.

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deficient mutants even under non-stress conditions (Chenget al., 2002; Koornneef et al., 1982). The severely truncatedroot system and dwarfed shoots of the ABA-insensitive abi8mutants indicate an important role for ABA in regulating plantgrowth (Brocard-Gifford et al., 2004). Other Arabidopsis ABA-insensitive mutants, however, have little effect on plant growth(Finkelstein, 1994; Koornneef et al., 1984; Nambara et al.,2002). In this study, the rescue of the primary and lateral rootmeristem defects of latd plants by the addition of ABA providesdirect evidence for a requirement for ABA in RAM function.Wefound that exogenous ABA not only rescues meristemorganization of latd primary and lateral roots, but also meristemfunction, restoring cell division and local inhibition ofdifferentiation. Our findings indicate a direct role for ABA in

promoting meristem function and organization in legume roots,and provide strong evidence that the target of ABA activity is theRAM.

In addition to rescuing the RAM of latd mutants, ABAalso rescues the adjacent root cap, restoring normalorganization and promoting development of the columellacell fate (Fig. 1). In Arabidopsis, the presence of the rootcap is required for continued RAM function, and RAMfunction is required for root cap formation (Jiang andFeldman, 2005; van den Berg et al., 1997; Woo et al., 1999).Our finding that ABA rescues latd root cap organization andpromotes development of columella cell fate indicates arequirement for a LATD-dependent ABA signaling pathwayin root cap maintenance or development. Because the locationof LATD activity is not known, we cannot determine whetherthe rescue of the latd RAM by ABA is an indirectconsequence of root cap rescue, or whether regulation ofRAM function is a primary target of LATD activity. Theregulation of the M. truncatula root cap and meristem byABA is consistent with the observation that in maize, rootABA levels are highest in the root cap and meristem (Schrautet al., 2004).

A LATD-dependent ABA signaling pathway regulates theformation of a functional lateral root meristem

The striking rescue of latd lateral roots by 10 μM ABApoints to a role for LATD and ABA not only in themaintenance of the primary root meristem, but also in thedevelopment of lateral roots. Our analysis of the relativeamounts of emerged versus elongating lateral roots in the latdmutant indicate that latd plants are blocked in that transition.The addition of ABA relieves that block, allowing theelongation of lateral roots (Fig. 2C). Studies of lateral rootdevelopment in Arabidopsis indicate that the newly formedlateral root meristem only becomes active after emergencefrom the parent root (Malamy and Benfey, 1997). Our datasuggest that LATD and ABA are required both for establishingthe organization of the lateral root meristem and for activatingit upon emergence. Such a role would be analogous to therole of LATD in the primary root meristem, where it isrequired to maintain both organization and function. Wecannot rule out the possibility that the latd mutation alsoaffects primordium initiation or the transition from primor-dium to emerged root, but the preponderance of the evidenceis that the primary effect of the latd mutation is to block thetransition to elongating lateral roots, and that this block isrelieved by addition of ABA.

In latd mutants, the total number of emerged and elongatingroots is much higher than wild-type. Addition of ABAincreases the number of elongating lateral roots in latd plantsand dramatically reduces the number of emerged, arrestedlateral roots (Fig. 2C). The excessive number of emergedlateral roots in untreated latd mutants suggests the existence ofa positive feedback mechanism, in which additional emergentlateral roots are produced when the transition to elongation isblocked.

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Complex regulation of nodule formation by ABA

ABA has been proposed to play both positive and negativeroles in legume nodule development (Ferguson and Mathesius,2003). ABA clearly functions as an inhibitor of early noduledevelopment: in the presence of 10 μM ABA, no visible bumpsor swellings are formed (Bano et al., 2002; Phillips, 1971;Suzuki et al., 2004). We find that nodule initiation (seeSupplementary Fig. 1) and primary root length (Fig. 1) aresimilarly affected by ABA. latd mutants initiate noduleformation normally, but nodules fail to complete development,remaining small, white and immature (Bright et al., 2005). Therole for LATD in ABA signaling demonstrated here raises thepossibility that ABA may be required for a later step in noduleformation controlled by the LATD gene. Unfortunately, theinhibitory effect of ABA on nodule initiation prevents us fromexamining a potential stimulatory effect of ABA on later noduledevelopment, such as meristem formation.

A novel component of the ABA signaling pathway

The particular constellation of latd phenotypes, unlike anydescribed ABA-insensitive mutants (Bonetta and McCourt,1998; Eyster, 1931; Koornneef et al., 1984), suggest that theLATD gene could represent a novel ABA response locus.Most ABA-insensitive (abi) mutants were identified in screensfor insensitivity to ABA inhibition of germination and havelittle effect on root growth. The latd mutant was identified in ascreen for plants with defects in both root and noduledevelopment (Bright et al., 2005), and may represent a newclass of ABA response genes.

The abi8 mutant, which has severe effects on both shoot androot growth, resembles the latd mutant phenotype most closely.Both mutants have defective root meristems, and are insensitiveto the effects of ABA on germination and on stomatal closure(Fig. 5) (Bright et al., 2005; Brocard-Gifford et al., 2004). Inaddition, studies of allelic mutants suggest that both latd andabi8 plants may have altered cell walls (Pagant et al., 2002;Veereshlingam et al., 2004). However, abi8 and latd mutantshave opposite responses to glucose and ABA. abi8 mutants arepartially rescued by the addition of glucose (Brocard-Gifford etal., 2004), whereas latd plants show hypersensitivity to glucosefor early seedling development (data not shown). In contrast,the latdmutant root growth defects are rescued by ABA (Figs. 1and 2), while those of abi8 mutants are enhanced (Brocard-Gifford et al., 2004). Thus, although the similarities between theabi8 and latd mutants are intriguing, these two mutations mostlikely represent distinct genes. Alternatively, the regulation oftwo homologous genes may have unique features in a legumeand non-legume species.

The LRD2 gene of Arabidopsis is involved in regulatinglateral root formation under both normal conditions and osmoticstress. However, LRD2 appears to be required for an earlierstage in lateral root development: the transition from primor-dium to emerged lateral root (Deak and Malamy, 2005). SinceABA has opposing effects on root architecture in legumes andnon-legumes (Liang and Harris, 2005), it is not surprising that

lrd2 and latd have opposite phenotypes. An lrd2 loss offunction mutant stimulates the development of additional lateralroots from primordia, whereas the latd loss of function mutantblocks the formation of elongating lateral roots. In addition, theregulation of LRD2 and LATD appear opposite: lrd2 mutantsare hypersensitive to ABA, whereas latd mutants have reducedsensitivity to ABA (Deak and Malamy, 2005). Thus, it seemslikely that LATD and LRD also represent different genes withroles in distinct stages of lateral root formation.

ABA and ethylene

ABA deficiency has been shown to limit the ability of rootsto elongate in maize, tomato and Arabidopsis. This short rootphenotype can be completely reversed by inhibiting ethylenesynthesis or signaling, either genetically or pharmacologically(Beaudoin et al., 2000; Cheng et al., 2002; Ghassemian et al.,2000; Sharp and LeNoble, 2002; Sharp et al., 2000). Based onthis model, we would predict that the ABA-insensitive latdmutant would be rescued by inhibiting ethylene signaling.However, we found that the latd short root phenotype is notrescued either by introduction of the ethylene-insensitive sicklemutation or by the addition of the ethylene biosynthesisinhibitor, AVG (Fig. 6). Together, these data suggest that thestimulatory effect of ABA on root growth of latd mutants is notdue to the relief of ethylene inhibition, and suggests thatethylene signaling may not be a target of the LATD-dependentABA pathway in M. truncatula roots.

A unique ABA signaling pathway in legume roots?

Analysis of the ABA signal transduction pathway in Arabi-dopsis and maize reveals a complex series of inputs andresponses that differ between roots, seed and shoots (Beaudoin etal., 2000; Cheng et al., 2002; Finkelstein et al., 2002;Ghassemian et al., 2000). In addition, our data paint a morecomplex picture than was previously thought, namely, thatlegume and non-legume lateral root meristems do not respond inthe same way to ABA (Liang and Harris, 2005). Legumes havean additional, novel feature of their ABA response: ABAregulation of nodule primordium formation and possibly ofnodule meristems. Analysis of the M. truncatula LATD geneprovides the strongest genetic link to date between ABAsignaling and lateral root formation and additionally connectsABA signaling with nodule meristem function (Bright et al.,2005).

Our data indicate that the LATD gene functions downstreamof ABA to regulate root meristem organization and activity. Itremains to be seen whether known signaling componentsfunction in an ABA response pathway in legume roots as theydo in maize and Arabidopsis. Since legume roots have analtered response to ABA as compared to non-legumes (Liangand Harris, 2005), it may be that the ABA signaling pathway inlegumes will contain novel components or lack certain keysignal transduction steps. Identifying the sequence of the LATDgene product would allow us to address the question of whetherLATD plays a role in ABA signaling in non-legume roots.

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Conversely, identification of legume homologs of known ABAsignaling components will evaluate the comparison of legumeand non-legume ABA response pathways.

Acknowledgments

We thank Tom Lewis for advice on the quantification ofABA levels, Tom Vogelmann for advice on epidermal peels,Mary Tierney and Terry Delaney for the use of microscopes forthe stomatal measurements and Lugol staining, respectively,Nicole DeLanz and Michelle von Turkovich of the VCC CellImaging Facility for assistance sectioning and staining root tipsand members of our laboratory for helpful discussions andcomments on the manuscript. This work was supported byNational Science Foundation grant IBN-0212992 and by USDACSREES Hatch funding to the Vermont Agricultural Experi-ment Station, Project # VT-HO-1202 to J.M.H.

Appendix A. Supplementary data

Supplementary data associated with this article can be found,in the online version, at doi:10.1016/j.ydbio.2006.12.037.

References

Bano, A., Harper, J.E., Auge, R.M., Neuman, D.S., 2002. Changes inphytohormone levels following inoculation of two soybean lines differingin nodulation. Funct. Plant Biol. 29, 965–974.

Beaudoin, N., Serizet, C., Gosti, F., Giraudat, J., 2000. Interactions betweenabscisic acid and ethylene signaling cascades. Plant Cell 12, 1103–1116.

Bonetta, D., McCourt, P., 1998. Genetic analysis of ABA signal transductionpathways. Trends Plant Sci. 3, 231–235.

Bonetta, D., Bayliss, P., Sun, S., Sage, T., McCourt, P., 2000. Farnesylation isinvolved in meristem organization in Arabidopsis. Planta 211, 182–190.

Bright, L.J., Liang, Y., Mitchell, D.M., Harris, J.M., 2005. The LATD gene ofMedicago truncatula is required both for nodule and root development.Mol. Plant–Microbe Interact. 18, 521–532.

Brocard-Gifford, I., Lynch, T.J., Garcia, M.E., Malhotra, B., Finkelstein, R.R.,2004. The Arabidopsis thaliana ABSCISIC ACID-INSENSITIVE8 encodes anovel protein mediating abscisic acid and sugar responses essential forgrowth. Plant Cell 16, 406–421.

Cheng, W.H., Endo, A., Zhou, L., Penney, J., Chen, H.C., Arroyo, A., Lėon, P.,Nambara, E., Asami, T., Seo, M., Koshiba, T., Sheen, J., 2002. A uniqueshort-chain dehydrogenase/reductase in Arabidopsis glucose signaling andabscisic acid biosynthesis and functions. Plant Cell 14, 2723–2743.

De Smet, I., Signora, L., Beeckman, T., Inze, D., Foyer, C.H., Zhang, H., 2003.An abscisic acid-sensitive checkpoint in lateral root development ofArabidopsis. Plant J. 33, 543–555.

Deak, K.I., Malamy, J., 2005. Osmotic regulation of root system architecture.Plant J. 43, 17–28.

Demont, N., Debelle, F., Aurelle, H., Denarie, J., Prome, J.C., 1993. Role of theRhizobium meliloti nodF and nodE genes in the biosynthesis of lipo-oligosaccharidic nodulation factors. J. Biol. Chem. 268, 20134–20142.

Ehrhardt, D.W., Atkinson, E.M., Long, S.R., 1992. Rhizobium meliloti Nodfactors. Science 256, 998–1000.

Eyster, W.H., 1931. Vivipary in maize. Genetics 16, 574–590.Ferguson, B.J., Mathesius, U., 2003. Signaling interactions during nodule

development. J. Plant Growth Regul. 22, 47–72.Finkelstein, R.R., 1994. Mutations at two new Arabidopsis ABA response loci

are similar to the abi3 mutations. Plant J. 5, 765–771.Finkelstein, R.R., Gampala, S.S.L., Rock, C.D., 2002. Abscisic acid signaling in

seeds and seedlings. Plant Cell Suppl. 2002, S15–S45.Fukaki, H., Wysocka-Diller, J., Kato, T., Fujisawa, H., Benfey, P.N., Tasaka, M.,

1998. Genetic evidence that the endodermis is essential for shootgravitropism in Arabidopsis thaliana. Plant J. 14, 425–430.

Ghassemian, M., Nambara, E., Cutler, S., Kawaide, H., Kamiya, Y., McCourt,P., 2000. Regulation of abscisic acid signaling by the ethylene responsepathway in Arabidopsis. Plant Cell 12, 1117–1126.

Hoffmann-Benning, S., Kende, H., 1992. On the role of abscisic acid andgibberellin in the regulation of growth in rice. Plant Physiol. 99, 1156–1161.

Irish, V.F., Jenik, P.D., 2001. Cell lineage, cell signaling and the control of plantmorphogenesis. Curr. Opin. Genet. Dev. 11, 424–430.

Jiang, K., Feldman, L.J., 2005. Regulation of root apical meristem development.Annu. Rev. Cell Dev. Biol. 21, 485–509.

Knox, J.P., Wareing, P.F., 1984. Apical dominance in Phaseolus vulgaris L. J.Exp. Bot. 35, 239–244.

Koornneef, M., Jorna, M.L., Derswan, D., Karssen, C.M., 1982. The isolation ofabscisic-acid (ABA) deficient mutants by selection of induced revertants innon-germinating gibberellin sensitive lines of Arabidopsis thaliana (L)Heynh. Theor. Appl. Genet. 61, 385–393.

Koornneef, M., Reuling, G., Karssen, C.M., 1984. The isolation andcharacterization of abscisic acid-insensitive mutants of Arabidopsisthaliana. Physiol. Plant 61, 377–383.

Léon-Kloosterziel, K.M., Gil, M.A., Ruijs, G.J., Jacobsen, S.E., Olszewski,N.E., Schwartz, S.H., Zeevaart, J.A., Koornneef, M., 1996. Isolation andcharacterization of abscisic acid-deficient Arabidopsis mutants at two newloci. Plant J. 10, 655–661.

Liang, Y., Harris, J.M., 2005. Response of root branching to abscisic acid iscorrelated with nodule formation both in legumes and non-legumes. Am. J.Bot. 92, 1675–1683.

Malamy, J.E., 2005. Intrinsic and environmental response pathways thatregulate root system architecture. Plant Cell Environ. 28, 67–77.

Malamy, J.E., Benfey, P.N., 1997. Organization and cell differentiation in lateralroots of Arabidopsis thaliana. Development 124, 33–44.

McAinsh, M.R., Brownlee, C., Hetherington, A.M., 1990. Abscisic acid-induced elevation of guard cell cytosolic Ca2+ precedes stomatal closure.Nature 343, 186–188.

McSteen, P., Leyser, O., 2005. Shoot branching. Annu. Rev. Plant Biol. 56,353–374.

Minorsky, P., 2003. The hot and the classic: heterophylly in aquatic plants. PlantPhysiol. 133, 1671–1672.

Nakajima, K., Benfey, P.N., 2002. Signaling in and out: control of cell divisionand differentiation in the shoot and root. Plant Cell 14, S265–S276 (Suppl.).

Nambara, E., Suzuki, M., Abrams, S., McCarty, D.R., Kamiya, Y., McCourt, P.,2002. A screen for genes that function in abscisic acid signaling inArabidopsis thaliana. Genetics 161, 1247–1255.

Oke, V., Long, S.R., 1999. Bacterial genes induced within the nodule during theRhizobium-legume symbiosis. Mol. Microbiol. 32, 837–849.

Pagant, S., Bichet, A., Sugimoto, K., Lerouxel, O., Desprez, T., McCann, M.,Lerouge, P., Vernhettes, S., Hofte, H., 2002. KOBITO1 encodes a novelplasma membrane protein necessary for normal synthesis of cellulose duringcell expansion in Arabidopsis. Plant Cell 14, 2001–2013.

Pei, Z.M., Ghassemian, M., Kwak, C.M., McCourt, P., Schroeder, J.I., 1998.Role of farnesyltransferase in ABA regulation of guard cell anion channelsand plant water loss. Science 282, 287–290.

Penmetsa, R.V., Cook, D.R., 1997. A legume ethylene-insensitive mutanthyperinfected by its rhizobial symbiont. Science 275, 527–530.

Phillips, D.A., 1971. Abscisic acid inhibition of root nodule initiation in Pisumsativum. Planta 100, 181–190.

Sabatini, S., Beis, D., Wolkenfelt, H., Murfett, J., Guilfoyle, T., Malamy, J.,Benfey, P., Leyser, O., Bechtold, N., Weisbeek, P., Scheres, B., 1999. Anauxin-dependent distal organizer of pattern and polarity in the Arabidopsisroot. Cell 99, 463–472.

Schraut, D., Ullrich, C.I., Hartung, W., 2004. Lateral ABA transport in maize roots(Zea mays): visualization by immunolocalization. J. Exp. Bot. 55, 1635–1641.

Sharp, R.E., LeNoble, M.E., 2002. ABA, ethylene and the control of shoot androot growth under water stress. J. Exp. Bot. 53, 33–37.

Sharp, R.E., LeNoble, M.E., Else, M.A., Thorne, E.T., Gherardi, F., 2000.Endogenous ABAmaintains shoot growth in tomato independently of effectson plant water balance: evidence for an interaction with ethylene. J. Exp.Bot. 51, 1575–1584.

Page 11: Abscisic acid rescues the root meristem defects of the ...both bacterial and plant nodule-expressed genes and do not fix nitrogen (Bright et al., 2005; Veereshlingam et al., 2004)

307Y. Liang et al. / Developmental Biology 304 (2007) 297–307

Sun, J., Cardoza, V., Mitchell, D.M., Bright, L., Oldroyd, G., Harris, J.M., 2006.Crosstalk between Jasmonic acid, ethylene and Nod factor signaling allowsintegration of diverse inputs for regulation of nodulation. Plant J. 46,961–970.

Suzuki, A., Akune, M., Kogiso, M., Imagama, Y., Osuki, K., Uchiumi, T.,Higashi, S., Han, S.Y., Yoshida, S., Asami, T., Abe, M., 2004. Control ofnodule number by the phytohormone abscisic acid in the roots of twoleguminous species. Plant Cell Physiol. 45, 914–922.

Swanson, J.A., Mulligan, J.T., Long, S.R., 1993. Regulation of syrM and nodD3in Rhizobium meliloti. Genetics 134, 435–444.

Thimann, K.V., 1936. Auxins and the growth of roots. Am. J. Bot. 23, 561–569.Trejo, C.L., Davies, W.J., Ruiz, L., 1993. Sensitivity of stomata to abscisic acid

(an effect of the mesophyll). Plant Physiol. 102, 497–502.Trejo, C.L., Clephan, A.L., Davies, W.J., 1995. How do stomata read abscisic

acid signals? Plant Physiol. 109, 803–811.van den Berg, C., Willemsen, V., Hendriks, G., Weisbeek, P., Scheres, B., 1997.

Short-range control of cell differentiation in the Arabidopsis root meristem.Nature 390, 287–289.

Veereshlingam, H., Haynes, J.G., Penmetsa, R.V., Cook, D.R., Sherrier, D.J.,Dickstein, R., 2004. nip, a symbiotic Medicago truncatula mutant that

forms root nodules with aberrant infection threads and plant defense-likeresponse. Plant Physiol. 136, 3692–3702.

Veit, B., 2004. Determination of cell fate in apical meristems. Curr. Opin. PlantBiol. 7, 57–64.

Veit, B., 2006. Stem cell signalling networks in plants. Plant Mol. Biol. 60,793–810.

Wais, R.J., Wells, D.H., Long, S.R., 2002. Analysis of differences betweenSinorhizobium meliloti 1021 and 2011 strains using the host calciumspiking response. Mol. Plant–Microbe Interact. 15, 1245–1252.

Walker-Simmons, M., 1987. ABA levels and sensitivity in developing wheatembryos of sprouting resistant and susceptible cultivars. Plant Physiol. 84,61–66.

Werner, T., Motyka, V., Strnad, M., Schmulling, T., 2001. Regulation of plantgrowth by cytokinin. Pro. Natl. Acad. Sci. U. S. A. 98, 10487–10492.

Woo, H.H., Orbach, M.J., Hirsch, A.M., Hawes,M.C., 1999.Meristem-localizedinducible expression of a UDP–glycosyltransferase gene is essential forgrowth and development in pea and alfalfa. Plant Cell 11, 2303–2315.

Xu, X., van Lammeren, A.A., Vermeer, E., Vreugdenhil, D., 1998. The role ofgibberellin, abscisic acid, and sucrose in the regulation of potato tuberformation in vitro. Plant Physiol. 117, 575–584.