1 udo buchholz, who/stop tb/tme operational research: methods and examples
TRANSCRIPT
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Udo Buchholz,
WHO/Stop TB/TME
Operational research: methods and examples
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What is operational research? (OR)
• Definitions found on the internet:– "Mathematical common sense"– "Systematic study, by observation and
experiment, of the working of a system, e.g. health services, with a view to improvement"
– "Using scientific methods to attack a complex problem or system"
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In the beginning there was ... a question
"Why in the world is it that 30% of our patients on treatment default?"
NTP manager in the morning
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Description of defaulters in Russia1
• Profession: unemployed: 26%, labourers 21%, students of vocational schools 19%, disabled 7%
• Education: incomplete secondary education: 70%
• Residence: homeless 5%, >5km away from treatment site 26%
• Behavioural risk factors: alcoholism 44%
1Data are from W. Jakubowiak, Russia
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Are these variables risk factors for default? – use of patient cohort for cohort study
0%
1%
2%
3%
4%
5%
6%
7%
8%
9%
Alcoholics No alcohol addiction
p-value<0.001
0%
10%
20%
30%
40%
50%
60%
70%
80%
90%
100%
Ex-prisoner No prison history
p-value<0.001
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Social support system
• Examples from different oblasts:– Food incentives– Hygienic kits– Free transportation– Psychological support– ....
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Adherence with social support
0%
10%
20%
30%
40%
50%
60%
70%
80%
90%
100%
Ex-prisoner No prison history
p-value=0.2
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More examples
• "Defaulting from anti-tuberculous treatment in a teaching hospital in Rio de Janeiro, Brazil" (IJTLD 2004)
• "A concurrent comparison of home and sanatorium treatment of PTB in South India" (BWHO 1959)
• " 'Lost' smear positive PTB cases: where are they and why did we lose them?" (IJTLD 2005)
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Determinants of a study
• Problem or question
• Data available
• Funding and staff available
• Political or hierarchical support Type of study
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Which scientific methods can we use? - Type of studies
• Descriptive studies– Analysis of surveillance data– Ecological study (correlational)– Cross-sectional survey
• Analytical studies– Observational (case-control study, cohort
study)– Experimental
• Other– E.g. capture-recapture study
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Smear-positive diagnosis by province, Syria
0.00.10.20.30.40.50.60.70.80.91.0
A Ar D H I K L M OS Q R RD S SW T Z
ss+
/all
pu
lmo
nar
yExample: Surveillance data reveal large provincial
differences of ss+ TB/all PTB
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No. of slides/patient is correlated with proportion of ss+/PTB
Smear-positive diagnosis: Syria
20
30
40
50
60
70
80
90
100
1.6 1.8 2.0 2.2 2.4 2.6 2.8 3.0 3.2 3.4
slides/patient
ss
+/a
ll p
ulm
on
ary
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Ecological comparison (correlational)
• Correlation of aggregated or group data
• Association on the individual level is unknown and may be different
• Many relationships on global level are strictly speaking of ecological nature
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Example of an "ecological" comparison: The prevalence of HIV in TB patients (y-axis) against the prevalence of HIV in adults (x-
axis).
ZIM
TAN
SOA
RWA
NIE
MOZ
LES
KEN
GHA
ETH
DJI
COD
IVC
CNG
CAE
BUU
BFA
MAL
KEN
HAI
DJI
IVC
CAF
CAM
BFA
BOT
0
20
40
60
80
0 10 20 30 40Estimated prevalence of HIV in adults (%)
Mea
sure
d p
reva
len
ce o
f H
IV i
n T
B p
atie
nts
(%
)
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Cross-sectional survey
• Collection of representative data
• Based on sampling size calculations, sampling frame and sampling scheme– Simple random sample– Systematic sampling– Cluster sample (design effect!)
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Surveys are frequently used in TB epidemiology
• Sampling universe is the population:– Prevalence surveys– Tuberculin skin test surveys
• Sampling universe is "all TB patients"– Proportion of diagnosed new TB patients with
HIV test
• Sampling universe is the number of culture positive TB patients– Drug resistance surveys
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Analytical studies
• Are used to identify risk factors or other forms of "exposure" and their association with an outcome, e.g. death, default, etc.
• Make use of a comparison group• Hypotheses are tested• Null hypothesis: "There is no association
of exposure and outcome" or: "Exposure and outcome are independent"
We then calculate the probability that this is true based on the data
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Case control study
• Starts with a group of cases, i.e. with a certain outcome, that is consistent with a case definition
• The case definition must be specific in regards to time, place and person
• E.g. "a person with smear positive TB diagnosed in Geneva city in 2004"
• Then select a group of persons without the outcome from the same population, here for example the general population
• From the case definition it follows: "a person without TB living in Geneva in 2004"
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Case control study: ascertainment of exposure status
• After identification of cases and controls the exposure status preceding the outcome is investigated
• E.g.: income (high versus low)
• Thus, the directionality is usually retrospective
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Selection of controls
• Imagine the cohort from which the cases would have arisen
• Or: Would the control have been a case if he/she had had the outcome in question?
• Example: cases of rare kidney disease in the Mayo clinic
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Typical control options
• Friend controls• Neighbourhood controls• Physician controls• Hospital controls• Population-based controls
• Consider: – Selection bias– Feasibility
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2 x 2 table (CCS (1))
• 50/1000 ss+ TB cases (5%) were poor, but only 5 of 2000 (0.25%) among the non-TB persons
Ss+ TB patients were 20 times more likely than the general population to be poor, however ...
Ss+ TB No ss+ TB
Low income 50 5
High income 950 1995
1000 2000 3000
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2 x 2 table (CCS (2))
• The chances of ss+TB patients to be poor is expressed as the odds = probability of poverty / prob of rich = 50/1000 / 950/1000 = 0.053
• The odds of non TB persons for poverty is therefore:5/2000 / 1995/2000 = 0.00251
• The ratio of the two odds (the odds ratio (OR)) is: 0.053/0.00251 = 21
Ss+ TB No ss+ TB
Low income 50 5
High income 950 1995
1000 2000 3000
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Use of case control studies
• When type of outcome is rare• We can examine >1 exposure• Usually relatively quick and inexpensive• Disadvantages:
– Not useful for rare exposures– Because exposure is in the past: watch out for
recall bias– Selection of cases and controls often not
straightforward (selection bias)
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Cohort study
• Starts with a group of people or a population that can be divided in two groups based on a defined exposure which some have and some don't
• The groups are then followed-up and an outcome is counted
• A case definition is still important• The directionality is usually forward, but
can also be backwards (retrospective cohort study)
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2 x 2 table (cohort study)
• We follow 100 low income TB patients and 200 high income TB patients up for adverse outcomes
• It turns out that 20 of 100 (20%) poor have a bad outcome versus 10 of 200 (5%) of the rich.
• Thus, the poor are 4 times more likely to have an adverse treatment outcome.
• Measure of association is the risk ratio (RR) = 0.2/0.05 = 4
Adverse outcome
Treatment success
Low income TB patient
20 80 100
High income TB patient 10 190 200
300
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Use of cohort studies
• When exposure is rare• We can examine >1 outcome• The outcome measure for the strata is an incidence
rate or (cumulative) risk and the overall point estimate the rate ratio or risk ratio (RR)
• Disadvantages:– Not suitable for rare outcomes– Not ideal for outcomes in the far future (unless you have
much time or lots of scientific altruism)– Watch out for loss to follow-up (they may represent a certain
category of patients)
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The TB quarterly "cohort"
• Pro- or retrospective cohort study
• (Nested) case-control study
Alhocol addiction
No addiction
Default?/Cure?
Default?/Cure?
Cases ControlsDefault Cured
Alhocol addiction
No addictionInformation may be available from start of treatment
Pro- Retro-
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2 x 2 table
exposed(unprotected)
not exposed(protected)
exposed(unprotected)
not exposed(protected)
HEALTHY
HEALTHY
DISEASED
DISEASED
ill Not ill
exposed
not exposed
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Cohort study
ill healthy
exposed
not exposed
time
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Case control study
ill healthy
exposed
not exposed
time
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Analytical study: experimental / intervention study
• Prospective• Use of a cohort• Exposure is usually an intervention, a
drug or vaccine• Patients are ideally randomized which
guarantees minimisation of bias• Example: IPT intervention study in South
African gold miners; recruitment in random sequence; comparison before / after IPT phase
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Steps for a OR protocol (1)
• Starts with a problem or question: e.g. "Why is there no decline in urban TB in Japan?"
• Gathering of information: – Analyse exhaustively routinely collected (surveillance)
data and disaggregate also by province etc – Talk with stakeholders – Investigation of the literature– Contact other countries
• Develop a hypothesis• Depending on money and staff available:
generate a protocol; but this can also be used to generate money and staff
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Steps for a OR protocol (2)
• Writing of the protocol: – You can structure it similar to a scientific paper– Introduction/rationale– Objective– Methods (study type, sample size, case definitions used,
inclusion/exclusion criteria, training, data collection, data entry (double entry?, data validation), quality control, lab methods, method of analysis)
– Ethical considerations– Results: shell tables, expected figures– Timeline– Budget– Appendices (questionnaire, maps, consent form...)– Good idea to do a pilot: feasibility, cost, first crude data
verify sample size assumptions
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Now it is up to you