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    Predictive microbiology: towards the interface and beyond

    T.A. McMeekin *, J. Olley, D.A. Ratkowsky, T. Ross

    School of Agricultural Science, University of Tasmania, PO Box 252-54, Hobart, Tasmania 7001, Australia

    Received 21 May 2001; accepted 9 August 2001

    Abstract

    This review considers the concept and history of predictive microbiology and explores aspects of the modelling process

    including kinetic and probability modelling approaches. The journey traces the route from reproducible responses observed

    under close to optimal conditions for growth, through recognition and description of the increased variability in responses as

    conditions become progressively less favourable for growth, to defining combinations of factors at which growth ceases (the

    growth/no growth interface). Death kinetics patterns are presented which form a basis on which to begin the development of

    nonthermal death models. This will require incorporation of phenotypic, adaptive responses and may be influenced by factors

    such as the sequence in which environmental constraints are applied. A recurrent theme is that probability (stochastic)

    approaches are required to complement or replace kinetic models as the growth/no growth interface is approached and

    microorganisms adopt a survival rather than growth mode. Attention is also drawn to the interfaces of predictive microbiology

    with microbial physiology, information technology and food safety initiatives such as HACCP and risk assessment. D 2002

    Elsevier Science B.V. All rights reserved.

    Keywords:Predictive microbiology; History and process; Growth/no growth interface; Microbial physiology; IT and food safety

    1. Introduction

    Methods of food preservation such as salting, dry-

    ing and fermentation have been carried out for thou-

    sands of years representing an empirical approach to

    the control of microbial populations in food. Theseprocesses continue to this day amongst indigenous

    populations, and, one suspects, with traditional prod-

    ucts produced in more sophisticated societies.

    Early examples of the application of scientific

    principles to food preservation include Pasteurs work

    on the specificity of undesirable fermentations in wine

    and the supply of lactic starter cultures by Hansens in

    Denmark at the end of the 19th century. However,

    while much of the fermentation industry (probably

    because of large-scale production and the influence

    of chemical engineers) has adopted quantitativeapproaches, large parts of food microbiology have

    remained essentially qualitative or at best semiquanti-

    tative. Thus shake and plate techniques allow

    enumeration to within F 0.5 log, with minimum

    levels of detection as high as 100 cfu/g. Furthermore,

    most probable number techniques often have very

    wide confidence limits and enrichment procedures

    allow the presence (not necessarily the absence) of a

    particular organism to be recorded in a sample. The

    sample, of course, may be totally inadequate to

    0168-1605/02/$ - see front matterD 2002 Elsevier Science B.V. All rights reserved.P I I : S 0 1 6 8 - 1 6 0 5 ( 0 1 ) 0 0 6 6 3 - 8

    * Corresponding author. Tel.: +61-362-262636; fax: +61-362-

    262642.

    E-mail address:[email protected]

    (T.A. McMeekin).

    www.elsevier.com/locate/ijfoodmicro

    International Journal of Food Microbiology 73 (2002) 395407

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    provide a true representation of the prevalence (prob-

    ability of occurrence) of the organism in the product

    lot, let alone a numerical indication of its density.

    This qualitative/semiquantitative state of affairswill continue to impede the progress of food micro-

    biology as a discipline that seeks to understand micro-

    bial behaviour in foods and thus provide the scientific

    basis upon which the food industry can supply safe

    and wholesome food. The situation is encapsulated by

    a quotation from the renowned physicist Lord Kelvin:

    When you can measure what you are speaking about

    and express it in numbers you know something about

    it; but when you cannot measure it, when you cannot

    express it in numbers, your knowledge is of a meagre

    and unsatisfactory kind. In defence of food (and

    probably other) microbiologists, deriving the quanti-

    tative laws of physics that govern the natural world

    was an exercise not unduly complicated by variability

    inherent in biological systems and uncertainty about

    the presence and potential of particular microorgan-

    isms.

    In many senses, the uncertainty factor is increasing

    in a world characterised by condensation, stratifica-

    tion and mobility of the human population. We are

    experiencing an unprecedented rate of change as a

    result of scientific and technological advances. Adap-

    tation to and exploitation of change is a primarycharacteristic of microorganisms that, because of their

    small size, speed of reproduction, phenotypic plasti-

    city and genetic promiscuity, colonise almost every

    conceivable habitat on earth. Thus, it is not surprising

    that we are faced with the emergence and reemer-

    gence of foodborne microbial pathogens (Lederberg,

    1997).

    Strategies to deal with these threats range from

    reactive measures in which resources are mobilised

    rapidly to address critical knowledge gaps to longer

    term strategic measures. This longer term research isneeded to improve our ability to respond quickly to

    new microbial threats and assist us to be more

    proactive at anticipating and preventing emergence

    (Buchanan, 1997). Important elements of a proactive

    approach are the accumulation of quantitative infor-

    mation on microbial behaviour in foods (predictive

    microbiology) and an increased understanding of

    microbial physiology (McMeekin et al., 1997).

    Predictive microbiology (the quantitative microbial

    ecology of foods) has, after a considerable gestation

    period, emerged strongly as an essential element of

    modern food microbiology. This contribution will

    consider the development of predictive microbiology

    with particular reference to interfaces. There areseveral connotations of interface that not only des-

    cribe boundaries of scientific interest such as the

    growth/no growth interface but also interfaces

    between disciplines that have led to significant con-

    ceptual and technological advances.

    2. Concept and history of predictive microbiology

    The concept of predictive microbiology is that a

    detailed knowledge of microbial responses to environ-

    mental conditions enables objective evaluation of the

    effect of processing, distribution and storage opera-

    tions on the microbiological safety and quality of

    foods. It involves the accumulation of knowledge on

    microbial behaviour in foods and its distillation into

    mathematical models. Application of this condensed

    knowledge is through devices that store and match the

    information with the environmental conditions expe-

    rienced by microorganisms in foods. These provide

    cost-effective surrogates for traditional microbiologi-

    cal testing to estimate shelf life and safety and, when

    properly constructed and applied, predictive modelsmay be viewed as potentially the ultimate rapid

    method.

    As indicated in the Introduction, methods for the

    preservation of foods have been practised for thou-

    sands of years and with the passage of time, many

    preservation methods have been characterised and

    their scientific basis determined. An early example

    of a predictive model is found in the thermal process-

    ing of foods where a heat process sufficient to destroy

    1012 spores ofClostridium botulinum type A is used.

    The process is characterised by a predictive modeldeveloped by Esty and Meyer (1922) and despite

    potential complications of shoulders and tails, the

    efficacy of the process is widely accepted by the

    canning industry. In large part, this arises from

    the magnitude of the safety factor built into the

    model.

    Heat processes have also been determined to

    ensure the thermal destruction of nonspore-forming

    organisms such as milk pasteurisation protocols for

    Mycobacterium tuberculosis and more recently for

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    Salmonella in roast beef and psychrotropic pathogens

    in sous-vide products. Where protocols are selected to

    minimise processing and the safety factor is reduced,

    more rigorous selection and validation of models isrequired. In the case of thermal processes, oversim-

    plifying description of the response on the basis of

    log linear kinetics may be inappropriate and the

    effect of shoulders and tails requires consideration.

    When nonthermal constraints are proposed to reduce

    numbers of low infective dose pathogens through

    several log cycles, such as in meat fermentations, an

    exact description of pathogen behaviour including

    variability in response, must be incorporated in the

    model if it is to be used with certainty.

    While the botulinum cook may have been the first

    predictive model (albeit only recently recognised as

    such) to find widespread utility in the food industry,

    reference to the potential use of predictive micro-

    biology to describe microbial growth can be found

    in the 1930s when Scott (1937) wrote: A knowledge

    of the rates of growth of certain microorganisms at

    different temperatures is essential to studies of the

    spoilage of chilled beef. Having these data it should

    be possible to predict the relative influence on spoil-

    age exerted by the various organisms at each storage

    temperature. Further, it would be possible to predict

    the possible extent of the changes in populationsthat various organisms may undergo during the

    initial cooling off of the sides of beef in the meat-

    works when the meat surfaces are frequently at

    temperatures very favourable to microbial prolifer-

    ation.

    Clearly, Scott understood the potential to use

    accumulated kinetic data on microbial growth res-

    ponses to predict the shelf life and safety of foods.

    Despite being unable to realise its full potential due to

    lack of computing power, it is salient to note that

    Scotts work on the effects of temperature, wateractivity and CO2 concentration enabled shipments of

    nonfrozen beef carcasses and quarters from the anti-

    podes to the UKan early example of the Hurdle

    Concept in action.

    The literature remained relatively silent on predic-

    tive microbiology until the 1960s and 1970s when

    manuscripts began to appear addressing food spoilage

    and food poisoning problems. The former issues were

    investigated using kinetic models (Spencer and

    Baines, 1964; Nixon, 1971; Olley and Ratkowsky,

    1973a,b). An important theme in any scientific dis-

    cipline is the recognition of overarching similarities as

    a first step in the development of a mechanistic

    understanding of the process involved. In investigat-ing the microbial spoilage of fish, Olley and Ratkow-

    sky (1973a,b) recognised the fundamental similarity

    of the response to temperature of many spoilage

    processes and proposed a universal spoilage curve.

    From this curve, these authors conceived the relative

    rate concept that has become the keystone in the

    application of predictive models and a forerunner to

    variants such as the gamma concept (Zwietering et al.,

    1996). The second area of research in predictive

    microbiology in the 1970s that dealt with prevention

    of botulism and other microbial intoxications was

    based on probability models (Genigeorgis, 1981;

    Roberts et al., 1981).

    The 1980s saw a marked increase in interest in

    predictive microbiology as a result of major food

    poisoning outbreaks and consequent public (and polit-

    ical) awareness of the requirement for a safe and

    wholesome food supply. Both traditional pathogens

    and foods (Salmonella in eggs) and emerging

    pathogens (Listeria monocytogenes) with unusual

    characteristics (psychrotrophy) contributed to the

    prioritisation of food safety research by governments

    in the USA, UK, other EU countries and Australia andNew Zealand.

    Through the 1980s and a large part of the 1990s,

    kinetic modelling approaches dominated the predic-

    tive microbiology scene, but more recently, a return to

    probability modelling has been evident.

    This trend can be attributed to the following.

    (i) Recognition that variability in response time

    (generation time and lag phase duration) estimates are

    not normally distributed but are usually described by a

    gamma or even inverse Gaussian distribution where

    response time variance is proportional to the square orthe cube of the mean response time (Ratkowsky et al.,

    1996).

    (ii) Emergence of dangerous pathogens (particu-

    larly Escherichia coli 0157:H7) with very low infec-

    tive doses where the knowledge base required

    description of conditions to prevent their proliferation

    or which lead to their inactivation.

    (iii) Increased awareness of stochastic approaches

    as a result of quantitative microbial risk assessment

    studies.

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    3. The modelling process

    Predictive microbiology is concerned with the

    accumulation and synthesis of knowledge. Ideally,all published, or otherwise archived knowledge on

    microbial behaviour in foods should be accessible to

    and accessed by researchers wishing to confirm or

    advance the state of knowledge.

    Clearly, this is not always (perhaps not often) the

    case and numerous instances can be cited where

    old papers were not located in literature searches,

    for example, square root-type temperature dependence

    models (Ratkowsky et al., 1982, 1983) were originally

    proposed as a power function by Belehradek (1926).

    This oversight was subsequently corrected with a

    special tribute to Professor Jan Belehradek in the

    Preface to the monograph Predictive Microbiol-

    ogy: Theory and Application (McMeekin et al.,

    1993).

    Researchers and funding agencies should be aware,

    despite the limitations of some publications, of the

    cost benefits available from judicious use of published

    work rather than total reliance on de novo generation

    of data (Ross, 1999a). Optimum benefit is derived

    when the retrieved knowledge is thoroughly and

    systematically analysed to exclude that which is

    patently erroneous or has been misinterpreted. Lackof critical evaluation during the review process or

    when citing references may lead to legitimising con-

    cepts and procedures that will subsequently inhibit the

    acceptance of predictive microbiology as an effective

    and reliable procedure to judge the microbial safety

    and quality of foods.

    Ross et al. (2000) in considering the theory and

    philosophy of mathematical modelling drew attention

    to the competing claims of empirical and mechanistic

    models. The former are pragmatic in nature and

    describe the data in a useful mathematical relation-ship. On the other hand, mechanistic models are

    derived from a theoretical basis, provide interpretation

    of the response observed in terms of the underlying

    mechanisms and are more amenable to refinement as

    knowledge of the system increases. Among the mod-

    els commonly used in predictive microbiology, none

    are purely mechanistic, many have some underlying

    basis and some are simply curve-fitting exercises that

    at the extreme are unique to the data used to generate

    the model.

    During the kinetic modelling boom of the 1980s,

    two major modelling approaches were used.

    (i) Models based on the sequential determination of

    the effect of individual factors or growth rates, forexample, a square root or Arrhenius model for temper-

    ature dependence to which terms for water activity,

    pH etc. were added. Characteristically, the experimen-

    tal methods involved close interval determinations for

    each environmental factor tested.

    (ii) Polynomial models based on response surface

    methodology where experiments usually involved

    simultaneous determination of the effects of several

    factors on microbial behaviour. The selection of the

    variables on the response surface was often deter-

    mined by a central composite experimental design.

    This suffered from an inability to determine ade-

    quately the effect of sufficient factor combinations

    across the entire multidimensional surface under con-

    sideration, particularly at the edges.

    While both approaches are empirical, proponents

    of the former argue that they contain parameters with

    biological relevance, whereas response surface, poly-

    nomial models represent a black box. In these,

    biological significance is hidden and cross product

    and other terms that are needed to describe responses

    may make the model a unique description of the data

    set used for its generation. Recent trends indicatingincreased use of computational neural networks

    advance the black box approach and may inhibit

    the search for mechanistic and biologically relevant

    models.

    Ross et al. (2000) also commented on aspects of

    practical model building including the range of char-

    acteristics investigated (growth, death, survival, toxin

    formation) and the variables modelled that often

    include temperature, water activity, pH, nitrite con-

    centration and gaseous atmosphere, and on occasions,

    organic acid or other preservative concentrations. Thesequential process adopted in modelling usually con-

    sists of developing a primary model to determine the

    magnitude of the responses of interest such as max-

    imum specific growth rate, lag phase duration, time to

    reach a specified level (cell numbers or metabolites)

    or death rate. A secondary model is then constructed

    to show the dependence of these factors on environ-

    mental conditions, and on occasions, the algorithm is

    incorporated into computer software packages to

    generate a tertiary model.

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    At various stages within national predictive micro-

    biology projects, for example, the UK MAFF Food

    Micromodel Program, quality assurance committees

    were established to prescribe the minimum standardsfor model development and validation. Several

    authors have also defined experimental protocols

    (e.g. McMeekin et al., 1993). Perhaps the occasion

    of the 3rd International Conference on Predictive

    Microbiology should reactivate the need to develop

    minimum experimental standards. Bacterial taxono-

    mists prescribe the minimum amount of experimental

    data required to describe a new bacterial species. A

    similar set of guidelines by experts in predictive

    modelling may allow reviewers and editors to exam-

    ine more closely journal submissions purporting to

    contain predictive models.

    4. Towards the growth/no growth interface

    Monod (1949) in his classic review The Growth

    of Bacterial Cultures stated that The growth of

    bacterial cultures, despite the immense complexity

    of the phenomena to which it testifies, generally obeys

    relatively simple laws which make it possible to

    define certain quantitative characteristics of the

    growth cycle, essentially the three growth constants:total growth (G), exponential growth rate (R) and

    growth lag (L). That these definitions are not purely

    arbitrary and do correspond to physiologically distinct

    elements of the growth cycle is shown by the fact that,

    under appropriately chosen conditions, the value of

    any one of the three constraints may change widely

    without the other two being significantly altered. The

    accuracy, the ease, the reproducibility of bacterial

    growth constant determinations is remarkable and

    probably unparalleled so far as biological quantitative

    characteristic are concerned.Such an opinion from a Nobel Laureate would

    have provided encouragement for early proponents of

    predictive microbiology for whom a basic premise

    was that the responses of microbial populations to

    environmental factors are reproducible. Clearly, with-

    out reproducible responses it would not be possible,

    from past observations, to predict future behaviour.

    However, Monod (1949) was primarily concerned

    with defining the general shape of the bacterial growth

    curve (a primary model) for organisms growing under

    well-controlled laboratory conditions including stud-

    ies of diauxie in which a series of growth phases could

    be induced. His review did not extend to analysing the

    effect of environmental factors on the magnitude ofthe three variables (secondary models) although this

    possibility was foreshadowed: Under certain specific

    conditions quantitative interpretations of the primary

    effect of the agent studied may even be possible.

    As we are now aware from predictive modelling

    studies, growth rates under conditions that permit

    rapid population development are remarkably repro-

    ducible. We are also aware that estimates of lag phase

    duration show greater variability and that as a pop-

    ulation experiences progressively harsher conditions,

    response times become longer and variability in-

    creases markedly. Recognition of this variability and

    its characterisation by a particular distribution was an

    important step in the development of predictive mod-

    elling (Ratkowsky et al., 1996). These observations

    are entirely consistent with the general rule that bio-

    logical processes display variability that must be

    characterised if the ecology of organisms in any

    environment is to be understood. Thus, as a microbial

    population moves progressively towards conditions

    that will eventually preclude growth (the growth/no

    growth interface), the ability of kinetic models to

    provide an accurate description becomes increasinglylimited. An appropriate strategy in this circumstance

    is to select a response time consistent with the severity

    of the microbial hazard and estimate the probability

    that the population will respond more quickly than the

    selected level (McMeekin et al., 1993).

    5. At the growth/no growth interface

    A consistent observation from many studies in

    predictive microbiology is that there is a minimumfinite rate of growth beyond which population devel-

    opment does not occur even with markedly extended

    periods of incubation. This boundary may be set by a

    single factor such as temperature or a combination of

    factors, for example, temperature, water activity, pH

    etc. Generally, when more than one factor constrains

    population development, the absolute level of each

    factor required to prevent growth is lessened. This is

    the essence of the Hurdle Concept advocated for

    many years by Professor Leistner and his colleagues

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    at the Federal Centre for Meat Research in Kulmbach,

    Germany (Leistner, 1978, 1992). The Hurdle Concept

    seeks to determine the minimum set of conditions to

    prevent the growth of pathogens, or better still, tocause inactivation. The goal is to produce foods that

    can remain stable and safe (even without refrigeration)

    and are acceptable organoleptically and nutritionally

    due to the mild processes applied.

    A commonly used analogy, introduced by Dr. M.

    Cole, to describe that set of minimal processing

    conditions is the Food Safety Cliff. The cliff edge

    represents those sets of product formulations beyond

    which foods are potentially unsafe and the top of the

    cliff represents the set of conditions that just prevent

    pathogenic microorganisms from growing. At a long

    distance from the cliff edge, there is great certainty

    that the food will be safe as pathogens have been

    eliminated or are unable to grow. That confidence

    decreases markedly as the cliff edge is approached.

    Conditions distant from the cliff edge represent highly

    processed foods, those nearer the edge are more

    natural products including minimally processed foods.

    Thus, knowledge of the position of the cliff edge can

    be used to design foods that just prevent microbial

    growth. This knowledge will be invaluable in opti-

    mising the amount and stringency of processing so

    that the aesthetic changes to the quality of the food areminimised.

    Further, while the Hurdle Concept is widely accep-

    ted as a food preservation strategy, its potential has

    not been fully realised as it is a largely qualitative

    concept, the application of which is often empirical.

    The intelligent selection of hurdles in terms of the

    number required, the intensity of each and the

    sequence of application to achieve a specified out-

    come provides significant potential to approach the

    edge of the food safety cliff with certainty.

    There are many possible physiological explana-tions to explain the cessation of growth including

    denaturation of ribosomes, membrane lipid phase

    changes, and energy diversion to deal with environ-

    mental insults to the point where insufficient energy

    remains to fuel biosynthetic processes (Knochel and

    Gould, 1995). While the prospect of a new generation

    of mild but effective processing techniques will

    require a thorough understanding of microbial phys-

    iology, considerable advances can be achieved by

    modelling the growth/no growth interface. In effect,

    this type of modelling quantifies the hurdle con-

    cept.

    Early attempts to define nongrowth conditions

    were based on + or

    observations (Christian andWaltho, 1962) with some of these studies used to

    develop probability models for growth. A more sys-

    tematic approach to interface modelling was reported

    by Ratkowsky and Ross (1995) to predict the growth/

    no growth interface forShigella flexnerias affected by

    temperature, pH, water activity and nitrite concentra-

    tion. The procedure involved modifying a growth rate

    model by taking the logarithm of both sides of the

    equation and replacing the left-hand side with a logit

    term (logit p), where p is the probability of growth

    occurring. This or similar approaches were subse-

    quently used by Presser et al. (1998) for E. coli,

    Bolton and Frank (1999) forL. monocytogenes, Ross

    (1999a) forKlebsiella oxytoca, Salter et al. (2000) for

    E. coliand Tiengunoon et al. (in press) for L. mono-

    cytogenes.

    6. The lag phase and fluctuating conditions

    The growth/no growth interface represents a boun-

    dary at which the growth rate is zero and the lag phase

    is infinite. Probably more than any other factor,accurate determination of the lag phase has created

    problems for predictive microbiologists. Indeed in

    many practical applications of predictive models such

    as the hygienic assessment of meat processing oper-

    ations (e.g. Gill et al., 1991), the lag phase is ignored.

    The great difficulty is that cells contaminating a food

    product range in physiological competence from those

    that are actively dividing, to those that display a

    physiological lag phase, to those that are damaged

    and require repair before resolving lag, to those that

    have entered a state of suspended animation (viablebut nonculturable), to those that are dead. Further

    modelling complications may arise when fluctuations

    in environmental conditions are of sufficient magni-

    tude or rapidity to induce a population that has

    resolved its lag phase to once again enter one of the

    lag states listed above.

    The duration of the phase is affected by factors

    such as the identity and phenotype of the bacterium

    (Buchanan and Cygnarowicz, 1990), inoculum size

    (Baranyi and Roberts, 1994), the physiological history

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    of the population (McMeekin et al., 1993) and by

    changes in the physiochemical environment such as

    temperature (Zwietering et al., 1994), pH, water

    activity and nutrient availability (Buchanan and Cyg-narowicz, 1990).

    While studying the effect of temperature shifts and

    fluctuations on growth rate, several authors have

    noted effects on the lag phase (Walker et al., 1990;

    Fu et al., 1991; Duh and Schaffner, 1993; Blackburn

    and Davies, 1994; Membre et al., 1999). It has often

    been observed that lag time is inversely proportional

    to the maximum specific growth rate (Smith, 1985;

    McMeekin et al., 1993; Baranyi and Roberts, 1994).

    The time required to resolve the growth lag

    depends on the growth rate of the organism, which

    is dictated by the growth environment. Lag time

    duration has often been considered erratic and evalu-

    ation of predictive models has shown that lag times

    are less reliably predicted than generation times. This

    has usually been attributed to the effect of the prior

    history of cells on the duration of the lag time.

    Robinson et al. (1998) formalised a concept of the

    lag time as being dictated by two elements:

    (i) the amount of work required of the cell to adjust

    to a new environment and/or repair injury due to the

    shift to the new environment, and

    (ii) the rate at which those repairs and adjustmentscan be made. The latter is presumed to respond to the

    environment in the same way, relatively, that gener-

    ation time does (i.e. if the environment causes the

    generation time to double, the lag time will also

    double).

    In effect, physiological lag times before exponen-

    tial growth commences reduce the potential growth of

    an organism during a given period of time. The

    potential exists to force an organism into a long lag

    by manipulation of mild environmental change. More

    severe environmental changes may lead to cell injuryor even death.

    In situations characterised by variability and uncer-

    tainty, the development of good mechanistic models is

    impossible and of good empirical kinetic models

    improbable. As was the case with kinetic growth

    models near the growth/no growth interface, the

    adoption of a stochastic or probability has proved to

    be an effective option (Ross, 1999a). This work

    demonstrated that the apparent variability in lag phase

    duration can be reduced by introducing the concept of

    relative lag times (RLTs) or generation time equiv-

    alents, that is, the ratio of lag time to generation time.

    Using this approach, a common pattern of distribution

    of RLTs for a wide range of species across a widerange of conditions has emerged.

    The introduction of the stochastic modelling

    approach to describe lag phase duration will have a

    profound effect on the application of predictive micro-

    biology allowing operators to move away from the

    worst-case scenario. We also foreshadow that the

    stochastic procedures now widely used in microbial

    risk assessments will find considerable utility in the

    description of specific food-processing operations.

    7. Beyond the growth/no growth interface

    Beyond the growth/no growth interface, rapid

    death induced by thermal energy or irradiation has

    been relatively well characterised. However, pat-

    terns of nonthermal death are less well established

    and, as was the case with growth kinetics, slow

    rates of decline are likely to display considerable

    variability.

    The general pattern observed when death is

    induced by low water activity conditions is a rapid

    phase followed a more gradual phase of decline.Generally, the magnitude of the rapid phase increases

    with the severity of the challenge, but thereafter, the

    rate of decline proceeds at approximately the same

    rate. Under many circumstances, complete extinction

    of the population is not achieved. With low pH-

    induced death, a third more rapid decline phase is

    observed that may be attributed to energy depletion as

    a result of proton pumping to maintain cytoplasmic

    pH homeostasis.

    The importance of energy status is also seen in

    markedly different responses to the sequence of wateractivity and pH challenges (Shadbolt et al., 2001).

    Reduced water activity followed by reduced pH leads

    to a gradual decline, whereas the reverse sequence

    causes rapid death on application of the second

    hurdle. Again this may be explained by postulating

    that the initial acid challenge depletes the cells energy

    reserves to the point where it is unable to deal with a

    subsequent water activity challenge. Conversely, the

    less energetically demanding water activity constraint

    (Krist et al, 1998a) when applied first allows the cell

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    to retain sufficient energy reserves to deal more

    effectively with a subsequent acid challenge.

    8. The interface between predictive microbiology

    and microbial physiology

    Monod (1949) was also aware that the quantitative

    description of microbial population behaviour (ecol-

    ogy) was inextricably linked to the underlying phys-

    iology of the cell when he wrote:

    There is little doubt that as a further advances are

    made towards a more integrated picture of cell phys-

    iology, the determination of growth constants will

    have a much greater place in the arsenal of micro-

    biology. Further he counselled The fallacy of con-

    sidering certain naive mechanistic schemes, however,

    as appropriate interpretations of unknown, complex

    phenomena should be avoided.

    The former statement reflects the development of

    predictive microbiology in which the patterns of

    responses observed provide clues to underlying phys-

    iological events in the cell.

    As an example, consider a typical Arrhenius plot of

    bacterial growth. Theory predicts that a plot of the

    natural logarithm of growth rate versus the reciprocal

    of absolute temperature will yield a linear relation-ship, the slope of which is the apparent energy of the

    reaction. While this is true for simple chemical reac-

    tions, complex biological phenomena such as micro-

    bial growth display continually downward sloping

    curves. On occasions, these were interpreted as rep-

    resenting two linear regions with different activation

    energies (Mohr and Krawiec, 1980) where it is tempt-

    ing to suggest that the discontinuity indicates a major

    physiological change (e.g. membrane lipid phase

    change) in the cell: perhaps an example of Monods

    fallacy of a naive mechanistic scheme.What can be deduced from a typical Arrhenius plot

    for bacterial growth is that there is a normal physio-

    logical range where Arrhenius kinetics provide a

    reasonable description of the observed response and

    where a constant activation energy is appropriate.

    Beyond that, region activation energy estimates

    change continually: in the high-temperature region

    due to irreversible denaturation and in the low-temper-

    ature region due to reversible denaturation of macro-

    molecules.

    An alternative description of the effect of temper-

    ature on microbial growth rates was provided by

    Belehradek (1926) and revived by Ratkowsky et al.

    (1982) as the square root model. In this model, asquare root transformation of data is preferred to a

    logarithmic transformation resulting in a linear

    response that is extrapolated to the theoretical mini-

    mum temperature for growth (Tmin), that is, where the

    regression line intersects the temperature axis of a

    square root plot.

    Belehradek (1930) was dismissive of the applica-

    tion of chemical kinetics to biological processes when

    he wrote: The problem of temperature coefficients in

    biology was initiated by chemists and has suffered

    from the beginning from this circumstance. Attempts

    to apply chemical temperaturevelocity formulae (the

    Q10 rule and the Vant HoffArrhenius law) to bio-

    logical processes failed because some of the temper-

    ature constants used in chemistry (Q10,m) can be saidnot to hold good in biological reactions. Neverthe-

    less, while Belehradek-type kinetics provide a good fit

    to data, a square root plot is perhaps less informative

    of the changing energy demands outside the normal

    physiological range that can be deduced from an

    Arrhenius plot.

    Observed patterns of response to lowered water

    activity and pH also provide clues to the mechanismsby which these hurdles affect the microbial cell. As an

    example, the constants of the microbial growth curve

    respond consistently to decreasing water activity lev-

    els viz.: the growth rate constant decreases, lag phase

    duration increases and cell yield remains constant

    until near the limiting level for growth. At this point,

    a marked reduction in yield is observed.

    When the information contained in the primary

    model is transformed into a secondary model, the

    optimum water activity is revealed together with a

    linear response to decreasing water activity in thesuboptimal range (e.g. see Troller and Christian, 1978

    forS. aureusand Krist et al., 1998a forE. coli). When

    experiments are carried out with different humectants,

    specific solute effects are also noted (Troller and

    Christian, 1978).

    Further, as water activity conditions become pro-

    gressively harsher, a common observation is that the

    minimum temperature for growth increases (e.g.

    McMeekin et al., 1987). This observation could be

    explained by invoking an energy diversion hypothesis

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    (Csonka, 1989; Knochel and Gould, 1995). That is,

    energy required to deal with the water activity hurdle

    is unavailable to overcome the concurrent temperature

    barrier to growth, and as a result, the minimumtemperature for growth must increase.

    While superficially attractive, this explanation is

    not consistent with the primary water activity/cell

    yield response that indicates that over a wide water

    activity range, all available substrate is converted into

    approximately the same amount of biomass (Krist et

    al., 1998a). A similar observation is made for temper-

    ature/cell yield responses, and for both constraints, the

    growth rate constant declines sequentially as temper-

    ature and water activity decrease in the suboptimal

    region.

    Conversely, at lowered pH levels, cell yield de-

    clines progressively but the growth rate constant is

    maintained across a wide pH range (Krist et al.,

    1998a). This response reflects the well-documented

    requirement for cells to maintain a constant internal

    pH consistent with efficient operation of enzymes and

    the need to expend energy pumping protons from the

    cytoplasm.

    The mechanism of microbial response to low-water

    activity stress involves the synthesis or accumulation

    of compatible solutes. These compounds stabilise

    enzyme structure and maintain them in an activeconfiguration. Compatible solutes are also known to

    confer protective effects against low-temperature

    stress (Ko et al., 1994), an observation consistent with

    the similar yield and growth rate constant responses

    observed at reduced temperatures and at reduced

    water activities.

    While Krist et al. (1998a) discounted major energy

    diversion as a growth-limiting mechanism at lowered

    water activity, the concept of a critical activation

    energy was proposed (Krist et al., 1998b). This

    hypothesis was derived from observations on E. coligrown without water activity limitation (0.997) and

    under stressful conditions (0.977) with and without

    the compatible solute, glycine betaine.

    The normal physiological temperature range was

    reduced by appropriately 50% ataw = 0.977 compared

    with aw = 0.997 but by approximately 25% at aw =

    0.977 in the presence of glycine betaine. The observed

    minimum temperature for growth at aw = 0.977 was

    25.8C from which a critical activation energy of 178kJ/mol was computed using the Arrhenius-based ther-

    modynamic model of Ross (1999b). Applying this

    critical activation energy value to the other conditions,

    a minimum growth temperature of 12.1 C was

    calculated at aw = 0.997 and 17.8 C at aw = 0.977plus glycine betaine. Both values were close to (f 1

    C) of the observed minimum temperature.Above we described a method to model the

    growth/no growth interface that is characterised by a

    sharp delineation between growth and no growth

    conditions. A physiological explanation for this obser-

    vation may be embodied in the concept of a critical

    activation energy for growth. In the case of water

    activity and temperature hurdles, this may reflect

    the degree of enzyme unfolding that is ameliorated

    in the presence of compatible solutes. It would there-

    fore be interesting to compare the stability of selected

    enzymes at the same critical activation energy

    achieved by various water activity/temperature com-

    binations in the presence/absence of compatible

    solutes. Furthermore, the critical activation energy

    hypothesis should be extended by measurement of

    the ATP expenditure required to maintain internal pH

    homeostasis.

    When considering survival and death kinetics, it is

    important also to take into account the physiological

    state of the organism and adaptive responses that

    enhance resistance to unfavourable conditions. Thephenomenon of acid habituation provides a good

    example of the phenotypic plasticity of microorgan-

    isms.

    Brown et al. (1997) provided, in part, a physio-

    logical explanation for increased acid tolerance in

    response to mild stress by characterising an increase

    in the level of cyclopropane fatty acids in the cell

    membrane. Production of these compounds is ener-

    getically expensive (three ATPs per mole synthesised)

    and membrane composition and acid tolerance return

    to approximately that of unstressed cells when theacid constraint is removed. While an increase in

    cyclopropane fatty acids per se may not be responsible

    directly for increased acid tolerance, it is of interest to

    note that in acidophiles such as Thiobacillus, >60%

    of membrane lipid fatty acids are of the cyclopropane

    variety (Levin, 1971).

    In keeping with the interface theme of this paper, it

    is clear that the bacterial cell membrane is a crucial

    interface between the cell and the surrounding en-

    vironment. In relation to growth at reduced pH levels,

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    active transport of protons across the membrane is

    essential and for survival rearrangement of mem-

    brane fatty acid composition appears to have a central

    role.Advances in instrumentation that can monitor

    membrane-related events in real time offer the pros-

    pect of increased understanding of the physiological

    processes that underlie the patterns of growth and

    death embodied in predictive models. Examples

    include fluorescence ratio imaging techniques that

    allow real time observation of changes in internal

    pH in response to environmental insults (Siegumfeldt

    et al., 2000) and the MIFEk System that provides

    direct measurement of ion fluxes across cell mem-

    branes. Originally designed for use with plants cells

    (Shabala et al., 1997; Shabala, 2000), the MIFEk

    System has recently been adapted for use with large

    microbial cells (Shabala et al., 2001b) and microbial

    films deposited or grown on glass surfaces (Shabala et

    al., 2001a). When used in tandem, fluorescence ratio

    imaging and the MIFEk System will provide a

    powerful combination to assess the efficacy of proto-

    cols to disturb intracellular homeostasis and the role

    of membrane transport systems in maintaining

    homeostasis. Together, the techniques have the poten-

    tial to provide information that will be the basis of a

    new generation of mild but effective food preservationprocedures. The speed at which information on the

    efficacy of antimicrobial combinations will accumu-

    late will be measured in hours rather than days or

    weeks required using conventional microbiology. As

    an example, using the MIFEk System, we have

    demonstrated in 2 3 h that proton efflux from a

    Thraustochytrid sp. ceases at 8 C. Collapse of thisessential physiological process presumably correlates

    with crystallisation of the cell membrane and effec-

    tively indicates the minimum temperature for growth

    of the organism. By contrast, temperature gradientincubator experiments to determine the minimum

    temperature for growth can continue for up to 90 days.

    9. The interface with information technology

    Although Scott (1937) had devised the concept of

    predictive microbiology, in reality, the development of

    predictive models was constrained until the advent of

    the computer and information technology age. Sim-

    ilarly, the application of predictive models is largely

    through the use of information technology. Impor-

    tantly, this resource allows the continual accumulation

    of knowledge and, as a consequence, should lead todevelopment of better models and greater scope for

    their application.

    As an example, consider the work of Gill et al. (e.g.

    Gill et al., 1991) on modelling the hygienic efficacy

    of meat processing operations. Gills original model

    was based only on the temperature response of

    E. coliusing a limited data set. Application using the

    Delphik temperature logging system relied solely on

    temperature history information and ignored other

    effects (such as water activity) known to limit micro-

    bial growth on meat carcasses during chilling. This

    is a typical worst-case scenario but nevertheless led to

    a useful concept, the process hygiene index (PHI),

    based on the potential growth ofE. coli at the slowest

    cooling point of the carcass. The criteria for the three-

    class sampling plan devised as a decision support

    system for the PHI were derived on the basis of

    cooling regimes known to produce meat of adequate

    hygienic quality. From this beginning, Gill and his

    colleagues (Gill et al., 1991) in New Zealand and

    Canada developed PHI recommendations for spray-

    chilled carcasses, hot boned product, offal handling

    and the transport and distribution of meat.Models forE. coli growth developed subsequently

    are based on much more extensive data sets and

    include the effect of water activity, pH and lactate

    concentration (Presser et al., 1997). This emphasises

    that knowledge is cumulative, can be stored, retrieved

    and interpreted and provides greater precision in

    describing the quantitative microbial ecology of

    foods.

    The accumulation of knowledge is also the corner-

    stone of quantitative microbial risk assessment. This

    procedure has been trialed as a measure of thehygienic equivalence of foods in international trade

    and involves hazard identification, exposure assess-

    ment, dose response assessment and risk character-

    isation. To date, most microbial risk assessments have

    been big picture attempts to quantify the risk of

    disease arising from certain microorganism/food com-

    binations (Cassin et al., 1998). While these may be

    valuable in a comparative sense and indicate where

    knowledge is lacking, they are always characterised

    by variability and uncertainty. The latter category

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    places a particular constraint on achieving a definitive

    outcome from a quantitative risk assessment.

    If uncertainty is removed (and variability mini-

    mised), the stochastic approaches embodied in riskassessment techniques should have the potential to

    characterise the microbiological consequences of a

    food-processing operation. To test this hypothesis,

    we selected production of fresh salmon fillets and

    attempted to define those factors mainly responsible

    for limiting shelf life (Rasmussen et al., 2001).

    Characterisation of the harvesting and processing

    operations allowed development of a process risk

    model to quantify the risk that the stated shelf life

    will not be achieved. Bacterial numbers in water and

    ice and on fish and contact surfaces were collected

    over a period of 9 months and fitted to distribution

    functions. The model constructed using Analytica 2.0

    predicted mean ice slurry water counts of log 3.36/ml

    (observed 3.35/ml), fish surface contamination levels

    to be log 3.31/ml (observed log 3.23/ml). The average

    predicted shelf life at 4C was 6.5 days (observed 6.2days). An importance analysis carried out on the

    model using Analytica demonstrated that storage

    temperature had a much greater influence on shelf

    life than contamination levels.

    This demonstrates clearly that when sufficient

    information is available and uncertainty is eliminated,a stochastic approach can provide an accurate micro-

    bial profile of a specific processing operation. We

    predict that stochastic modelling packages such as @

    Risk and Analytica will be used increasingly to

    characterise food-processing operations and to sug-

    gest effective strategies to achieve food safety and/or

    food quality objectives.

    10. The interface with food safety initiatives

    Predictive microbiology through interfaces with

    many other disciplines has emerged as a paradigm

    of modern food microbiology. It provides a scientific

    basis to underpin the HACCP concept and quantita-

    tive microbial risk assessment.

    A dynamic interaction exists between HACCP (the

    tool by which safety is built into food-processing

    operations) and risk assessment (a measure of the

    effectiveness of HACCP on other safety assurance

    programs). This interaction may be facilitated by

    developing food safety objectives but cannot occur

    effectively without quantitative information.

    Predictive microbiology assists the formulation of

    HACCP plans by identifying hazards and criticalcontrol points and in specifying limits and corrective

    action (Miles and Ross, 1999). With QMRA, predic-

    tive models have a particular role as a cost-effective

    means to provide the exposure assessment informa-

    tion, a critical element in risk assessment.

    11. Conclusions

    Microbial food safety is of concern to industry,

    government and the population at large with each

    group anticipating the provision of a safe and whole-

    some food supply as a basic tenet of a developed

    society.

    It is clear that predictive microbiology has a major

    role to play in meeting this aspiration and that already

    it has become an essential element of modern food

    microbiology. This status has been achieved by con-

    tinually improving our understanding of the quantita-

    tive microbial ecology of foods and by developing

    interfaces with other disciplines to apply the knowl-

    edge contained in predictive models. Its utility will be

    further enhanced when predictive microbiology isrecognised as an effective rapid method.

    We foreshadow that consolidation of existing and

    development of new interfaces will lead to acceptance

    of predictive microbiology as a mature subdiscipline

    of microbiology. In particular, alignment of quantita-

    tive knowledge of microbial behaviour in foods with

    understanding of underlying physiological processes

    offers the prospect of a new generation of mild, but

    effective, food preservation procedures.

    Acknowledgements

    The authors thank the many postgraduate students

    and colleagues for contributions to predictive micro-

    biology research at the University of Tasmania over a

    period of 25 years. We particularly acknowledge the

    continuing financial support of Meat and Livestock

    Australia and assistance from the Department of

    Industry Science and Resources to attend the 3rd

    International Conference on Predictive Modelling in

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    Foods, Leuven, Belgium, September 2000. Copies of

    the oral presentation at Leuven on which this paper is

    based are available electronically in Power-Point

    format from the corresponding author.

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