transmart development workshop welcome
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tranSMART Foundation
eTRIKS / tranSMART
Workshop25th-27th of February Imperial College London
tranSMART Development Workshop:Goals and the Schedule
Prof. Yike Guo
Academic PI, eTRIKSCTO, the tranSMART Foundation
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First of all, Welcome ! Dinner @ 19:15 tonight , 170 Queen’s Gate
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tranSMART, an Opportunity
• Big and immediate market need: not a hype
• A working version of system: not a vision
• A growing development community : not a silo
• Existing funded development efforts: not poor
• Many eager users : not just a push, but lots of poll
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tranSMART, in transition
• Transitioning from code for service to code for produce
• Transitioning from vender-owned open source to community-owned open source
• Transitioning from data warehouse to content rich informatics platform
• Transitioning from pharmaceutical application centric to general medical research community
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TranSMART Foundation
• VisionRealizing the promise of translational biomedical research
• MissionThe tranSMART Foundation enables effective sharing, integration, standardization, and analysis of heterogeneous data from collaborative translational research by mobilizing the tranSMART open-source and open-data community
• Goals Establish and sustain tranSMART as the preferred data sharing and analytics platform for translational biomedical research.Link academic, non-profit and corporate research communities for collaborative research facilitated by tranSMART.Align and grow a vibrant developer network around the scientific goals of the tranSMART community.Reduce barriers to entry through use of advanced technologies and an active marketplace.
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tranSMART Development: Divergence vs Convergence
• Divergence is inevitable– Different focuses of use
– Different emphasis in development
– Different ideas in designing
• Convergence is essential – Need a stable and uniform core
– Need a commonly agreed development process
– Need a disciplined quality control
– Need a shared vision of the roadmap
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Goal of the workshop : Building up Productive Convergence for Progressive Divergence
• A common understanding of the state of the art
• A collective designed and agreed development process and platform
• A agreed roadmap of development for next 6 and 12 months towards a stable tranSMART 1.x core system
• A shared vision of tranSMARTfuture direction beyond 1.x
• An organisational mechanism for delivering the core system
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By the end of the workshop, we will have a young global development team with
• a shared vision • a common development
platform • an agreed process • a virtual organisation
structure • a joint development focus• a warm teammate-ship • a determination to win