searching databases rare disease informationimg2.eurordis.org/infohub/dbasenew.pdf · searching...

25
Searching databases for rare disease information David OZIEL EURORDIS www.eurordis.org EURORDIS Online Training

Upload: others

Post on 28-Jul-2020

4 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

Searching databases for

rare disease information

David OZIELEURORDIS

www.eurordis.org

EURORDIS Online Training

Page 2: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

Part 1Characteristics of databases

Page 3: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

3

Database definition

Collection of information,

concerning a defined domain,

organized ,

described with precise and specific keywords ( indexed)

Page 4: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

4

Organisation and indexation of a databaseOrphanet

Fabry disease

Alpha-galactosidase A deficiency

Research programs

Clinical trials

Drugs

Clinics

Diagnosis

Texts on diseases

Persons

Anderson-Fabry diseaseLocation

Angiokeratoma, diffuse

Page 5: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

5

Organisation and indexation of a databasePubmed

Prophylaxis in bleeding disorders.

Oldenburg J.Thromb Res. 2011 Jan;127

Abstract

Author(s)

Location(s)

Journal

Editor

Title

Keywords (topics)

disease,…

Subheadings

Diagnosis, treatment,…Primary prophylaxis with coagulation factor concentrates has become the standard of care for children with hemophilia to reduce the risk of bleeding and related morbidity…

Date

Page 6: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

6

Google Databases

1,000 billion pages collected

Selected resources

Full text Keywords + Full text

Variable quality Validated information

FreeAds

Fees

Various types / kinds

Page 7: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

7

Bibliographic databases

Topics

Journal, Date, Title,

Authors

Page 8: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

8

Directory (factual) databases

Page 9: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

9

Numeric databases

Page 10: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

10

Full text databases

Page 11: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

11

Part 2Rare disease databases

Page 12: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

12

Major resources

• Orphanet

• NORD Rare disease database

• Genetics Home Reference

• Gene Reviews

• OMIM

• Medscape Reference

Page 13: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

13

Orphanet

• Portal

• 6,000 diseases

• 6 languages

• Directory of services

• Online encyclopaedia

Page 14: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

14

Page 15: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

15

Major resources

• Orphanet

• NORD Rare disease database

• Genetics Home Reference

• Gene Reviews

• OMIM

• Medscape Reference

Major resources

Page 16: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

16

Major resources

• Orphanet

• NORD Rare disease database

• Genetics Home Reference

• Gene Reviews

• OMIM

• Medscape Reference

Major resources

Page 17: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

17

Part 3Orphan drug information

Page 18: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

18

Designation and Marketing authorization

• Orphan drugs� Prevalence < 1 / 2,000 people

• Designation� Criteria

• EMA (European Medicines Agency)� COMP (Committee for Orphan Medical Products)

• Marketing authorization� Central authorization procedure

• U.S., Australia, Japan,…

Page 19: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

19

Orphan drugs

• List of orphan drugs

� European Medicines Agency (EMA)

� Orphanet

• Orphan drug databases

� Eudrapharm

� Orphanet

Page 20: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

20

Orphan drugs

• List of orphan drugs

� European Medicines Agency (EMA)

� Orphanet

• Orphan drug databases

� Eudrapharm

� Orphanet

Orphan drugs

Page 21: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

21

• Eudrapharm (EMA)� Drugs with marketing authorization� Europe� Centralized procedure� 1995

� Summary of Product Characteristics– European languages

– characteristics as agreed during the assessment pro cess– for health professionals – available for general public.

Page 22: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

22

• Orphanet� Orphan designation in Europe� Marketing authorization

– Europe– United States– Japan, Australia,...

Page 23: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

23

Part 4Clinical trial databases

Page 24: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

24

Clinical trials

• Research study

� New drug, new indication

� Medical device

• Safety

• Efficacy

Page 25: Searching databases rare disease informationimg2.eurordis.org/infohub/DBaseNew.pdf · Searching databases for rare disease information David OZIEL EURORDIS EURORDIS Online Training

25