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STAGES OF AMINO ACIDS CATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2

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Amino acids are the building blocks of the proteins. Twenty amino acids are commonly found in proteins. INTRODUCTION

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Page 1: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

STAGES OF AMINO ACIDS CATABOLISM

Dr. Samah KotbLecturer of Biochemistry

2015

Cellular Biochemistry and metabolism 2

CLS 333

Page 2: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

STAGES OF AMINO ACIDS CATABOLISM

CHAPTER 8

Page 3: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

• Amino acids are the building blocks of the proteins.

• Twenty amino acids are commonly found in proteins.

INTRODUCTION

Page 4: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

4

• Amino acids are essentially α-amino acids:

Page 5: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

They differ from each other in their side chains, or R

groups, which vary in structure, size, and electric

charge, and which influence the solubility of the

amino acids in water.

INTRODUCTION

Page 6: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

• Arginine (Arg)• Threonine (Thr)• Lysine (Lys)• Valine (Val)• Phenylalanine (Phe)

• Tryptophan (Trp)• Methionine (Met)• Histidine (His)• Leucine (Leu)• Isoleucine (Ile)

6

Essential Amino Acids

Page 7: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

• Only 10 % of the daily energy requirements of an

average adult are provided by amino acid degradation.

• This is not high when compared to monosaccharide

(50%) and fatty acids (40%).

Catabolism of Amino Acids in Animal Tissue

Page 8: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

• Amino acids entering cells are primarily used by the

cells for synthesize of various structurally or

biologically important proteins such as enzymes

and hormones.

Catabolism of Amino Acids in Animal Tissue

Page 9: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

• The remaining amounts of amino acids after sufficient

proteins have been synthesized are now degraded to

produce energy equal to 10 % of the daily

requirements.

Catabolism of Amino Acids in Animal Tissue

Page 10: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

• 20 amino acids catabolism give 10 % of daily energy

requirements.

Catabolism of Amino Acids in Animal Tissue

Page 11: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

There are 2 stages of amino acid catabolism:-

STAGE 1:

Removal of the primary amino groups by an

enzymatically catalyzed reaction known as

TRANSAMINATION catalyzed by enzymes known as

TRANSAMINASES.

Stages of Amino Acids Catabolism

Page 12: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

STAGE 2:

Degradation of the remaining keto-acids into acetyl-Co

A or other TCA cycle intermediates.

Stages of Amino Acids Catabolism

Page 13: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

Stages of Amino Acids CatabolismStages of Amino Acids Catabolism

Page 14: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

The α amino group of the amino acid is enzymatically

transferred to an acceptor molecule namely α-

ketoglutarate leaving behind the corresponding keto

acid. α-ketoglutarate becomes aminated and yields

glutamate:-

Stage 1: TRANSAMINATION (Deamination)

Page 15: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

Stage 1: TRANSAMINATION (Deamination)

Page 16: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

α-ketoglutarate serves as the universal acceptor of

amino groups during the transamination of all 20 amino

acids. However a specific transaminase is required for

each of the 20 amino acids. Eg:-

Stage 1: TRANSAMINATION (Deamination)

Page 17: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333
Page 18: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

Glutamate undergoes oxidative deamination to

remove the amino groups which appears as ammonia.

The reaction is catalyzed by the enzyme Glutamate

Dehydrogenase which uses NAD+ as a coenzyme. (a

mitochondrial enzyme).

Ammonia is formed from Glutamate (Fate of Glutamate):

Page 19: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333
Page 20: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

As a result of transamination 20 different ketoacids are

formed.

Each of the 20 ketoacids is oxidized by a specific pathway and

end up as either acetyl-CoA or one of the TCA cycle

intermediates.

Some of these oxidative pathways are simple, whereas others

are complex & multistep.

Stage 2: Oxidation of Ketoacids

Page 21: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

1. Examples of oxidation of Ketoacids:

Page 22: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

2.

Stage 2: Oxidation of Ketoacids:

Page 23: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

3.

Stage 2: Oxidation of Ketoacids:

Page 24: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

4.

Stage 2: Oxidation of Ketoacids:

Page 25: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333

Oxidation of ketoacids of corresponding amino acids

Page 26: S TAGES OF A MINO A CIDS C ATABOLISM Dr. Samah Kotb Lecturer of Biochemistry 2015 Cellular Biochemistry and metabolism 2 CLS 333