Rcpp is readyRomain François

@romain_francois

jeudi 11 juillet 13

Rcpp is readyRomain François

@romain_francois

jeudi 11 juillet 13

0.10.4jeudi 11 juillet 13

Texte

acer, ALKr, Amelia, apcluster, BayesComm, bcp, bfa, bfp, bifactorial, blockcluster, ccaPP, cda, cladoRcpp, classify, climdex.pcic, clogitL1,

clusteval, ConConPiWiFun, cxxfunplus, ddgraph, Delaporte, DESeq2, devtools, diversitree, ecp, EpiContactTrace, ExactNumCI, fastGHQuad, FastPCS, FBFsearch, fdaMixed, flowWorkspace, forecast, fugeR, geiger, GeneNetworkBuilder, GeneticTools, gMWT, GOSemSim, GOsummaries, gRbase,

GRENITS, gRim, growcurves, GSE, GUTS, HLMdiag, httpuv, hyperSpec, inline, jaatha, KernSmoothIRT, Kmisc, knitr, LaF, marked, maxent, mets, minqa, mirt, miscF, mosaics, MPTinR, msgl, multmod, mvabund,

MVB, mzR, NetworkAnalysis, ngspatial, oem, openair, orQA, pcaMethods, phom, phylobase, planar, PReMiuM, psgp, quadrupen, RcppArmadillo,

RcppBDT, rcppbugs, RcppClassic, RcppClassicExamples, RcppCNPy, RcppDE, RcppEigen, RcppExamples, RcppGSL, RcppOctave, RcppProgress, RcppRoll, RcppSMC, RcppXts, Rdisop, rexpokit, rforensicbatwing, rgam, RInside, Risa, Rmalschains, RMessenger, rmgarch, Rmixmod, robustgam, robustHD,

rococo, RProtoBuf, RQuantLib, RSNNS, RSofia, rTANDEM, rugarch, RVowpalWabbit, SBSA, sdcMicro, sdcTable, sequences, simFrame, sirt, spacodiR, sparseHessianFD, sparseLTSEigen, SpatialTools, stochvol, stream, surveillance, survSNP, tagcloud, TAM, tbart, termstrc, tmg, transmission, transnet, trustOptim, unmarked, VIM, waffect, WideLM,

wordcloud, zic

143jeudi 11 juillet 13

Texte

A3, a4, a4Base, a4Classif, a4Core, a4Preproc, a4Reporting, ABarray, abc, abcdeFBA, ABCp2, abctools, abd, aBioMarVsuit, abn, acer, aCGH, ACME, ACNE, aCRM, acs, Actigraphy, actuar, ActuDistns, adabag, ADaCGH2, AdaptFit, AdaptFitOS, adaptMCMC, adaptsmoFMRI, adaptTest, ade4, ade4TkGUI, adegenet, adehabitat,

adehabitatHR, adehabitatHS, adehabitatLT, adehabitatMA, adephylo, AdMit, ads, adSplit, AER, afex, affy, affycomp, AffyCompatible, affyContam, affycoretools, AffyExpress, affyILM, affylmGUI, affyPara, affypdnn, affyPLM, affyQCReport, AffyRNADegradation, AffyTiling, afmtools, aftgee, AGD, AGDEX,

Agi4x44PreProcess, AgiMicroRna, agop, agRee, Agreement, agricolae, agridat, ahaz, AICcmodavg, AID, ALDqr, ALKr, allanvar, AlleleRetain, alphahull, alphashape3d, alr3, alr4, altcdfenvs, amap, Amelia, amen, anacor, analogue, AnalyzeFMRI, anesrake, animation, annaffy, annmap, annotate, AnnotationDbi,

AnnotationForge, AnnotationFuncs, AnnotationHub, annotationTools, anoint, anota, aod, aods3, AOfamilies, apcluster, apComplex, ape, apple, AppliedPredictiveModeling, apt, apTreeshape, aqfig, aqp, aqr, ARAMIS, archetypes, argparse, arm, aroma.affymetrix, aroma.cn, aroma.core, ArrayBin, ArrayExpress, ArrayExpressHTS, arrayMvout, arrayQuality, arrayQualityMetrics, ArrayTools, ARTIVA, arules, arulesNBMiner, arulesSequences, arulesViz,

asbio, ascii, ascrda, aspace, aspect, astro, AtelieR, attract, AUCRF, audiolyzR, automap, autopls, AutoSEARCH, aylmer, B2Z, BaBooN, backtest, bagRboostR, BaM, bamdit, bams, bandit, barcode, BAS, BaSAR, baseline, BatchExperiments, BatchJobs, BayesComm, bayescount, BayesDA, bayesDem, BayesFactor, bayesGARCH,

bayesGDS, BayesLCA, bayesLife, bayesMCClust, bayesmix, BayesPeak, bayesPop, bayespref, bayess, BayesSingleSub, bayesSurv, bayesTFR, Bayesthresh, BayesTree, BayesVarSel, BayesX, BayesXsrc, BayHaz, baySeq, BaySIC, BB, bbemkr, BBmisc, bbmle, bc3net, BCA, BcDiag, BCE, BCEA, Bchron, Bclim, bcool, bcp,

BCRANK, bcrm, BDgraph, beadarray, beadarrayFilter, beadarrayMSV, beadarraySNP, beanplot, bear, benchmark, ber, Bergm, BerkeleyEarth, Bessel, BEST, bestglm, betapart, betaper, betareg, betr, bfa, bfast, bfp, bgafun, bgeva, BGmix, bgmm, bgx, BHH2, biasbetareg, BicARE, biclust, BiDimRegression, bifactorial, biganalytics, bigdata, bigGP, bigmemoryExtras, bigml, bigrf, bigRR, bigtabulate, BigTSP, bindata, binhf, BinNor, binom, Biobase, BiocCaseStudies, BiocGenerics, biocGraph, BiocInstaller, BiocParallel, biocViews, bioDist, BiodiversityR, BioGeoBEARS, Biograph, biom, BioMark,

BiomarkeR, biomaRt, biomod2, BioMVCClass, biomvRCNS, BioNet, bios2mds, BioSeqClass, Biostrings, biovizBase, bipartite, BiplotGUI, birch, birta, bisectr, BiSeq, bisoreg, BitSeq, biwavelet, biwt, BLCOP, blender, blm, blme, blockcluster, blockmodeling, blockTools, BMA, bmd, bmem, bmk, bmp, bnlearn, BOG, BoolNet, boostSeq, boot, bootES, bootfs, bootRes, bootspecdens, bootStepAIC, Boruta, boss, BoSSA, bpca, bpkde, BradleyTerry2, BRAIN, BrainStars,

branchLars, brglm, Brq, BRugs, BSagri, BSDA, BSgenome, bsml, BSquare, bsseq, bst, BTSPAS, BTYD, BufferedMatrixMethods, bumphunter, BVS, bwsurvival, c060, c3net, ca, cacher, CaDENCE, CADFtest, CAGEr, caGUI, CalciOMatic, CALIB, calibrate, calmate, CAMAN, CAMERA, cancerclass, CancerMutationAnalysis,

cancerTiming, candisc, cape, caper, capushe, car, CARBayes, carcass, cardidates, caret, caroline, CARramps, caschrono, casper, catdata, CatDyn, Category, categoryCompare, catenary, catIrt, catnet, caTools, catR, catspec, causalsens, Causata, cba, CBPS, CCA, ccaPP, cccd, ccChooser, cccrm, cda, CDM, CDNmoney, CDVine, cellGrowth, cellHTS, cellHTS2, CellNOptR, cellVolumeDist, cem, cems, censReg, CePa, cepp, cg, CGEN, CGHbase, CGHcall, cghMCR, CGHnormaliter, CGHregions, ChainLadder, ChangeAnomalyDetection, changepoint, charlson, charm, CheckDigit, chemCal, ChemmineR, chemometrics,

ChemometricsWithR, ChemoSpec, cherry, chillR, chimera, ChIPpeakAnno, chipseq, ChIPseqR, ChIPsim, ChIPXpress, CHNOSZ, ChoiceModelR, choplump, chopsticks, chroGPS, ChromHeatMap, chron, CHsharp, CircStats, circular, CITAN, cladoRcpp, class, classGraph, classifly, classify, classInt, clhs, climdex.pcic, clippda, clipper, clogitL1, CLSOCP, clst, clstutils, clue, clues, cluster, clusterCons, clustergas, clusterGeneration, clusterPower, clusterProfiler,

clusterSim, clusterStab, clusteval, clusthaplo, clv, clValid, CMA, cmrutils, cn.farms, cn.mops, cncaGUI, CNORdt, CNORfeeder, CNORfuzzy, CNORode, CNTools, CNVassoc, cnvGSA, coalescentMCMC, COBRA, cobs, CoCiteStats, CoClust, cocor, cocorresp, cocron, coda, codelink, coefficientalpha, coefplot, coenoflex, CoGAPS, coGPS, coin, CoinMinD, CollocInfer, coloc, colorfulVennPlot, colorspace, CombMSC, CommonTrend, Comp2ROC, compareGroups, compeir, compoisson,

compositions, compositionsGUI, Compounding, CompRandFld, ConConPiWiFun, confReg, conjoint, CONOR, CONORData, ConsensusClusterPlus, constrainedKriging, conting, contrast, ConvergenceConcepts, convert, COP, copa, copas, copula, copulaedas, CopulaRegression, CopyDetect, copynumber, CORElearn, corHMM,

Cormotif, CorMut, coRNAi, CorrBin, CORREP, corrgram, corrplot, COSINE, cosso, costat, cotrend, COUNT, CountsEPPM, covLCA, covTest, CoxBoost, coxme, CPE, CpGassoc, cplm, CPMCGLM, Cprob, cqn, cramer, crawl, CRImage, crlmm, crmn, crn, crossmatch, crs, CrypticIBDcheck, CSAR, cshapes, CSS, ctc, Cubist, cudia, cummeRbund, curvclust, curvetest, curvHDR, cvAUC, CVST, CVThresh, cvTools, cvxclustr, cwhmisc, cwm, cxxfunplus, cycle, cyphid, cytoDiv, d3Network, DAAG, DAAGbio, DAAGxtras, dae, daewr, DAGGER, DAKS, daMA, DAMisc, DandEFA, DART, DASiR, data.table, DatABEL, datacheck, DataCombine, DataFrameConstr, datamart,

datautils, DATforDCEMRI, dave, DBChIP, DBKGrad, dbmss, dbstats, DCGL, dclone, DCluster, dcmle, dcv, ddalpha, ddCt, DDD, ddepn, ddgraph, decctools, DECIPHER, DeconRNASeq, Deducer, DeducerExtras, DeducerPlugInExample, DeducerPlugInScaling, DeducerSpatial, DeducerSurvival, DeducerText, deducorrect,

deepSNV, DEGraph, degreenet, Delaporte, deltaGseg, deltaPlotR, Demerelate, demi, demography, dendroextras, DendSer, denstrip, DEoptim, depmix, depmixS4, depth, deseasonalize, DESeq, DESeq2, desirability, detect, detrendeR, Devore6, Devore7, devtools, DEXSeq, dexus, df2json, DFP, dglm, dgmb, dhglm,

DiagTest3Grp, DiceDesign, DiceEval, DiceKriging, DiceOptim, DiceView, dielectric, DierckxSpline, DiffBind, diffdepprop, diffusionMap, difR, Digiroo2, directlabels, DirichletMultinomial, DirichletReg, disclapmix, discreteRV, DiscriMiner, diseasemapping, dismo, disp2D, Distance, DistatisR, distory, distr, distrDoc, distrEllipse, distrEx, DistributionUtils, distrMod, distrRmetrics, distrSim, distrTeach, distrTEst, divagis, diveMove, diversitree, diveRsity, DivMelt, dixon, dlm, dlmap, dlmodeler, dlnm, dma, dmt, DMwR, dna, DOBAD, doBy, DoE.base, DoE.wrapper, domainsignatures, doMC, Dominance, doMPI, doParallel, doRedis, doRNG, DOSE, DoseFinding, doSNOW, dostats, downloader, dpa, dplR, DPM.GGM, dpmixsim, DPpackage, dr, drc, drfit, driftsel, DrugVsDisease, dse, dse1, dse2, dsm, DSpat, DSS, DTA, DTComPair, dti, dtw, dualKS, dvfBm, DWD, dyebias, dyn, dynamicGraph, dynaTree, dynlm, dynsurv, e1071, earlywarnings, earth, easi, EasyABC, easyanova, EasyHTMLReport, EasyqpcR, easyRNASeq, easystab, eba, EBarrays, EBcoexpress, ebdbNet, EBImage, EBMAforecast, EBS, Ecdat, ecespa, eco, EcoHydRology, ecolitk, ecp, EDanalysis, EDASeq, edgeR, EDISON, editrules, EDR, edrGraphicalTools, eeptools,

effects, EffectStars, egonet, eHOF, eigendog, eiPack, eiR, eisa, ElemStatLearn, ellipse, elliptic, elmNN, elrm, EMA, EMC, EMCC, EMCluster, EMD, emdbook, emma, EMMAgeo, emme2, emplik, ENA, enaR, endorse, energy, EngrExpt, ENmisc, EnQuireR, ensembleBMA, ensembleMOS, ensemblVEP, EnvNicheR, epade, Epi, epibase, epicalc, EpiContactTrace, epigenomix, EpiModel, epoc, EQL, equateIRT, EquiNorm, equivalence, erer, ergm, ergm.count, ergm.userterms, eRm,

ESPRESSO, EstCRM, etable, ETAS, ETC, ETLUtils, etm, EvalEst, evaluate, eventstudies, EVER, evmix, evora, evtree, ExactNumCI, ExceedanceTools, ExiMiR, exomeCopy, ExomeDepth, expectreg, experiment, explorase, expm, expoRkit, ExpressionView, expsmooth, exsic, extracat, extRemes, ez, ezsim, fabia, FacPad, factDesign, FactMixtAnalysis, FactoClass, FactoMineR, factorQR, Fahrmeir, fail, FAiR, fame, Familias, fanc, fanovaGraph, fanplot, FAOSTAT, faoutlier,

far, fArma, farms, fAsianOptions, fAssets, fast, fastclime, fastcox, fastGHQuad, fastICA, FastImputation, FastPCS, fastR, fastseg, FAwR, fBasics, fbati, FBFsearch, fBonds, fbRanks, fCertificates, fCopulae, FD, fda, fda.usc, fdaMixed, fdasrvf, fds, FeaLect, feature, features, fExoticOptions, fExtremes, ffbase, FFD, FField, ffpe, fGarch, FHtest, fields, FieldSim, fImport, FinancialInstrument, FindIt, FinTS, FisherEM, fishmethods, fishmove, fit.models,

FitAR, FitARMA, fitdistrplus, fitTetra, flagme, flare, flexclust, flexmix, FlexParamCurve, flip, FLLat, flowClust, flowCore, flowFlowJo, flowFP, flowMeans, flowMerge, flowPhyto, flowPlots, flowQ, flowQB, flowStats, flowTrans, flowType, flowUtils, flowViz, flowWorkspace, flsa, flubase, flux, fma,

fmcsR, FME, fmri, fmt, fMultivar, FNN, fNonlinear, foodweb, fOptions, forams, foreach, ForeCA, forecast, forensic, ForImp, formatR, formula.tools, forward, fossil, fpc, fpca, fPortfolio, fpp, fracdiff, fractalrock, frailtyHL, frailtypack, FRAPO, FRB, FRBData, frbs, FRCC, fRegression, FrF2,

FrF2.catlg128, frma, frmaTools, frmqa, frontier, frontiles, fscaret, FSelector, fso, FTICRMS, fTrading, ftsa, fugeR, fume, FunciSNP, FunCluster, FuncMap, fUnitRoots, FunNet, futile.any, futile.logger, futile.matrix, FuzzyNumbers, FuzzyStatProb, FWDselect, fxregime, G1DBN, gaga, gage, gaggle, galts,

GAMBoost, gamboostLSS, gamclass, games, gamlr, gamlss, gamlss.add, gamlss.cens, gamlss.demo, gamlss.dist, gamlss.mx, gamlss.nl, gamlss.tr, gamlss.util, gamm4, gammSlice, gap, gazetools, gb, GB2, gbm, gbs, gcbd, gcdnet, gcExplorer, gclus, gCMAP, gCMAPWeb, gcmr, gcookbook, gcrma, gdimap, gdistance, gee,

geeM, geiger, gems, gemtc, GenABEL, genArise, GENE.E, GeneAnswers, GENEAread, GeneCycle, GeneExpressionSignature, genefilter, genefu, GeneGA, GeneGroupAnalysis, Geneland, GeneMeta, GeneNet, GeneNetworkBuilder, geneplotter, GeneralizedHyperbolic, geneRecommender, GeneReg, GeneRegionScan,

GeneSelectMMD, GeneSelector, geneSignatureFinder, geNetClassifier, genetics, GeneticsDesign, GeneticsPed, GeneticTools, GenKern, genlasso, GenomeGraphs, genomeIntervals, genomes, GenomicFeatures, GenomicRanges, Genominator, genoPlotR, GenOrd, genoset, genridge, GeoLight, GEOmap, geomapdata, GEOmetadb,

geometry, geomorph, geophys, geoPlot, GEOquery, geoR, geoRglm, georob, geospacom, geosphere, geospt, GEOsubmission, geotopbricks, GeoXp, geozoo, getopt, GetR, GEVcdn, GEWIST, GExMap, GGally, GGBase, ggbio, ggdendro, GGEBiplotGUI, ggm, ggmap, ggmcmc, GGMselect, ggparallel, ggplot2, ggROC, ggsubplot, ggthemes, GGtools, ghyp, GibbsACOV, girafe, giRaph, GISTools, gitter, Giza, glassomix, GLDEX, glmc, glmmAK, glmmBUGS, glmmLasso, glmnet, glmnetcr,

glmperm, glmulti, GlobalAncova, globalboosttest, globaltest, glogis, gmapR, gMCP, GMD, gmm, GMMBoost, gmodels, gmp, gMWT, gnm, gof, GoFKernel, GOFSN, GOFunction, GOGANPA, gogarch, googlePublicData, googleVis, goProfiles, goric, GOSemSim, goseq, GOSim, GOstats, GOsummaries, goTools, govdat, gpairs,

GPfit, gplots, gpls, gppois, gprege, gProfileR, gptk, GPvam, GRaF, gRain, granova, granovaGG, graph, GraphAT, gRapHD, graphite, GraphPAC, GrassmannOptim, gRbase, gRc, gregmisc, GRENITS, Grid2Polygons, gridBase, gridDebug, gridExtra, gridGraphviz, gridSVG, GriegSmith, gRim, grImport, grouped, growcurves, growthrate, GRRGI, grt, gsarima, gsbDesign, gsDesign, GSE, GSEABase, GSEAlm, gsg, GSIF, gsmaRt, GSRI, gstat, gstudio, gsubfn, GSVA, gtable, gte, Guerry,

GUIDE, GUniFrac, GUTS, gvcm.cat, Gviz, GWAF, gwascat, GWASTools, gwerAM, gWidgetsWWW, GWmodel, gwrr, haarfisz, HAC, HadoopStreaming, HandTill2001, HAP.ROR, hapFabia, Haplin, haplo.ccs, haplo.stats, HaploSim, hapsim, Harshlight, harvestr, hash, hbsae, HCsnip, hda, HDclassif, hddplot, hdlm, HDMD,

hdrcde, Heatplus, HELP, HEM, heplots, hergm, het.test, hett, hexbin, hgam, hglm, HGLMMM, HH, hht, HiDimDA, hierarchicalDS, hierfstat, HIest, highfrequency, highr, highriskzone, HilbertVis, HilbertVisGUI, HiPLARM, hiPOD, hisemi, HistData, HiTC, HiveR, HLMdiag, hlr, hmeasure, Hmisc, HMMcopy, hmmm, HMP, HMPTrees, hof, homals, hopach, hotspots, hpar, HPbayes, HPO.db, HPOSim, HSAUR, HSAUR2, hSDM, HSROC, HTMLUtils, HTqPCR, hts, HTSanalyzeR,

HTSeqGenie, htSeqTools, HTSFilter, httpuv, httr, huge, HumMeth27QCReport, HWEBayes, hwriterPlus, hybridHclust, HybridMC, HybridMTest, hydroGOF, HydroMe, hydroPSO, hydroTSM, HyperbolicDist, hyperdirichlet, hyperdraw, hypergeo, hypergraph, hyperSpec, HyPhy, hzar, iBBiG, ibd, IBDsim, IBHM, iBMQ, ibr,

IBrokers, iBUGS, ic.infer, icaOcularCorrection, ICE, ICEinfer, iChip, iCluster, ICS, ICSNP, idiogram, IdMappingAnalysis, IdMappingRetrieval, IDPmisc, iFad, iFlow, ifultools, iGasso, IgorR, igraph, igraph0, igraphdata, igraphtosonia, illuminaio, IM, imageHTS, imguR, ImpactIV, imprProbEst, imputation, imputeYn, indicspecies, inference, influence.ME, infoDecompuTE, informR, infutil, inline, insideRODE, inSilicoDb, inSilicoMerging, insol, installr,

intamap, intamapInteractive, InteractiveIGraph, intergraph, Interpol.T, interval, intReg, introgress, intsvy, inveRsion, iPAC, ipdmeta, iplots, IPMpack, IPPD, ipred, IPSUR, ipw, IQCC, IRanges, iRefR, iRegression, irlba, irtoys, irtProb, irtrees, isa2, isdals, ISIPTA, ISLR, ismev, isobar, isocir, IsoGene, IsoGeneGUI, isopam, IsotopeR, ISOweek, iSubpathwayMiner, isva, ISwR, ITALICS, iteRates, iterativeBMA, iterativeBMAsurv, iterators, itertools, itree, its, IUPS, ivivc, iWebPlots, iWeigReg, jaatha, jackknifeKME, JADE, JGL, JGR, JJcorr, JM, JMbayes, jmec, Jmisc, jmosaics, joda, joineR, JointRegBC, JOP, JoSAE, kaps, KCsmart, kdetrees, KEGGgraph, keggorthology, KEGGprofile, KEGGREST, KEGGSOAP, kelvin, Kendall, kerdiest, kernelFactory, KernSmooth, KernSmoothIRT, kinship2, kitagawa, kknn, klaR, klausuR, klin, Kmisc, kml, kml3d, knitcitations, knitr, knitrBootstrap, knnGarden, knorm, kobe, kohonen, KoNLP, koRpus, KrigInv, ks, KsPlot, kst, ktspair, kulife, kzs, l2boost, labdsv, laeken, LaF, Lahman, LambertW, landsat, languageR, lapmix, LargeRegression, latdiag, latentnet, Laterality, lattice, latticeDensity, latticeExtra, LatticeKrig, latticist, lava, lava.tobit, lavaan, lavaan.survey, lawstat, lazyData,

lazyWeave, lbiassurv, LCAextend, lcd, lcda, lcmr, lda, ldbounds, LDcorSV, ldDesign, LDheatmap, ldlasso, LDOD, ldr, LEAPFrOG, leapp, LearnEDA, les, lessR, lestat, lfe, lfstat, lga, lgcp, libamtrack, LICORS, LICurvature, lifecontingencies, LIHNPSD, likelihood, LIM, limma, limmaGUI, limSolve, LinearizedSVR, lineup, linkcomm, lint, LiquidAssociation, liso, list, llama, lle, lmbc, lmdme, lme4, lmeNB, lmeNBBayes, LMERConvenienceFunctions, lmerTest, lmeSplines,

LMest, LMGene, lmmfit, lmmlasso, lmSupport, lmtest, localdepth, localgauss, locfit, log4r, LogConcDEAD, logconcens, logcondens, logcondens.mode, logcondiscr, LogicForest, logicFS, logistf, logitT, logmult, lokern, lol, longitudinalData, longmemo, longpower, longRPart, loop, LoopAnalyst, lordif, lossDev, LPCM, lpNet, lqmm, LS2W, lsa, LSC, LSD, lsmeans, lspls, lss, ltm, ltmle, ltsk, lubridate, luca, lumi, LVMMCOR, LVSmiRNA, M3, maanova, MAc,

macat, MAclinical, maCorrPlot, MAd, mada, maDB, made4, Maeswrap, magnets, maigesPack, MAINT.Data, makecdfenv, makeR, MALDIquant, MALDIquantForeign, MAMA, Mangrove, manta, MapGAM, MAPLES, mapplots, maptools, maptree, mAr, MAR1, mar1s, marginalmodelplots, marginTree, markdown, marked, maRketSim, marmap, marray, MARSS, maSigPro, maskBAD, MASS, MassSpecWavelet, MasterBayes, MAT, Matching, MatchIt, maticce, matie, Matrix, MatrixModels, MAVTgsa, maxent, maxLik, maxlike, MBA, MBESS, MBmca, mbmdr, mboost, mBPCR, mc2d, mcaGUI, mcgibbsit, mchof, mcll, mclogit, MCMCglmm, MCMChybridGP, MCMCpack, mcmcplots,

Mcomp, MCPAN, McParre, MCPerm, MCPMod, mcprofile, MCRestimate, mcsm, McSpatial, mda, MDM, MDPtoolbox, mdqc, MDR, MDSGUI, meboot, mederrRank, mediation, MEDIPS, MEDME, MEET, mefa, mefa4, meifly, melody, mem, memisc, MEMSS, MergeGUI, MergeMaid, MESS, meta, metaArray, MetabolAnalyze, metabolomics, metacom, Metadata, MetaDE, metafor, metagen, metagenomeSeq, metahdep, metaMA, metamisc, MetaPath, MetaPCA, MetaQC, meteogRam, Meth27QC, MethComp, methVisual, methyAnalysis, MethylSeekR, methylumi, metRology, metrumrg, mets, MEWMA, mFilter, mfr, Mfuzz, mgcv, mgpd, mgraph, mgsa, MHadaptive, mht, mhurdle, mi,

mice, micEcon, micEconAids, micEconCES, micEconSNQP, MiChip, MiClip, microbenchmark, micromap, microRNA, MIfuns, MigClim, migui, MineICA, minfi, MinimumDistance, minPtest, minqa, miP, MIPHENO, MiPP, MiRaGE, mirt, miRtest, misc3d, miscF, miscFuncs, MiscPsycho, miscTools, missForest, MissingDataGUI, missMDA, MissMech, MitISEM, mixAK, mixcat, mixedQF, mixexp, mixlow, MixMAP, mixOmics, mixPHM, mixsep, MixSim, mixstock, mixtools, mkin, MKmisc, mlbench, mlDNA, MLDS, mlearning, mleur, mlgt, MLInterfaces, mlmRev, mlogit, mlogitBMA, MLP, MLPAstats, MM, MMDiff, mmeta, mmm, mmm2, mmod, MmPalateMiRNA, MNM, MNP, mobForest, Mobilize, MOCCA, Modalclust, modeest, modelcf, ModelGood, ModelMap, modiscloud, modTempEff, MOJOV, mokken, mombf, Momocs, mondate,

monomvn, Morpho, MortalitySmooth, mosaic, mosaics, MotifDb, motifRG, motifStack, MotIV, move, movMF, mpa, MPDiR, MplusAutomation, mpm, mpMap, mpmcorrelogram, mpoly, MPTinR, mratios, MRCV, mrdrc, mrds, mritc, mRMRe, msap, msarc, MSBVAR, MSeasy, MSeasyTkGUI, mseq, MSG, msgl, msir, msme, MSnbase,

MSQC, msr, msSurv, MSwM, mtcreator, MUCflights, MuFiCokriging, mugnet, Mulcom, multcomp, multcompView, MultEq, multgee, multibiplotGUI, multic, MultiLCIRT, multilevel, multilevelPSA, multinomRob, MultiOrd, MultiPhen, multiPIM, multiscan, multisensi, multitable, multitaper, multmod, multtest,

muma, MuMIn, munfold, munsell, mutoss, mutossGUI, MVA, mvabund, MVB, mvc, mvinfluence, mvmeta, mvna, mvoutlier, MVPARTwrap, MVpower, mvProbit, MVR, mzR, nacopula, nadiv, NanoStringNorm, NarrowPeaks, nbpMatching, nCal, ncdfFlow, NCIgraph, ndl, ndtv, ndvits, NeatMap, needy, neldermead, nem, NestedCohort,

netClass, NetCluster, NetIndices, NetPreProc, netresponse, nets, netweavers, network, NetworkAnalysis, networkBMA, networkDynamic, networksis, networkTomography, neuralnet, nFactors, ngspatial, NHEMOtree, NHPoisson, Nippon, nlADG, nlme, nlmeODE, nlmrt, nlrwr, nls2, NlsyLinks, nlts, NMF, NMOF, NMRS, nnclust, nnet, nnNorm, nodeHarvest, NOISeq, nonparaeff, NonpModelCheck, nopp, nor1mix, NormalGamma, NormqPCR, np, nparcomp, nparLD, NPCD, NPCirc,

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3324jeudi 11 juillet 13

#include <Rcpp.h>

// [[Rcpp::export]]int add( int a, int b){ return a + b ;}

> sourceCpp( "add.cpp" )> add( 1, 2 )[1] 3

sourceCpp

jeudi 11 juillet 13

cppFunction( 'int add( int a, int b){ return a + b ;}' )add( 1, 2 )# [1] 3

cppFunction

jeudi 11 juillet 13

C++ Classesclass Account { private: double balance ;

public: Account( ) : balance(0){}

double get_balance(){ return balance ; }

void withdraw(double x){ balance -= x ; }

void deposit(double x ){ balance += x ; }} ;

RCPP_MODULE(BankAccount){ class_<Account>( "Account" ) .constructor()

.property( "balance", Account::get_balance )

.method( "deposit", Account::deposit) .method( "withdraw", Account::withdraw) ;}

account <- new( Account )account$deposit( 1000 )account$balanceaccount$withdraw( 200 )account$balance

jeudi 11 juillet 13

rcpp.orggallery.rcpp.org

jeudi 11 juillet 13

Challenge :

API Documentation

jeudi 11 juillet 13

jeudi 11 juillet 13

jeudi 11 juillet 13

jeudi 11 juillet 13

RStudio

devtools

jeudi 11 juillet 13

romain@r-enthusiasts.com

@romain_francois

Questions

jeudi 11 juillet 13