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Prove your point!

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Page 1: Prove your point! - depot.galaxyproject.org · The Genomic HyperBrowser • Web system for analysis of genomic tracks • Tens of custom-built tools • Thousands of collected tracks

Prove your point!

Page 2: Prove your point! - depot.galaxyproject.org · The Genomic HyperBrowser • Web system for analysis of genomic tracks • Tens of custom-built tools • Thousands of collected tracks

The Genomic HyperBrowser

• Web system for analysis of genomic tracks

• Tens of custom-built tools

• Thousands of collected tracks

• But mainly:

• A single tool hiding nearly 100 statistical analyses and hypothesis tests

Page 3: Prove your point! - depot.galaxyproject.org · The Genomic HyperBrowser • Web system for analysis of genomic tracks • Tens of custom-built tools • Thousands of collected tracks

The aim

• Analyze any kind of genomic track data

• Cover every non-standard investigation

• Robust statistical analysis

Page 4: Prove your point! - depot.galaxyproject.org · The Genomic HyperBrowser • Web system for analysis of genomic tracks • Tens of custom-built tools • Thousands of collected tracks

Enough talk..

(internet worked!)

Page 5: Prove your point! - depot.galaxyproject.org · The Genomic HyperBrowser • Web system for analysis of genomic tracks • Tens of custom-built tools • Thousands of collected tracks
Page 6: Prove your point! - depot.galaxyproject.org · The Genomic HyperBrowser • Web system for analysis of genomic tracks • Tens of custom-built tools • Thousands of collected tracks
Page 7: Prove your point! - depot.galaxyproject.org · The Genomic HyperBrowser • Web system for analysis of genomic tracks • Tens of custom-built tools • Thousands of collected tracks
Page 8: Prove your point! - depot.galaxyproject.org · The Genomic HyperBrowser • Web system for analysis of genomic tracks • Tens of custom-built tools • Thousands of collected tracks
Page 9: Prove your point! - depot.galaxyproject.org · The Genomic HyperBrowser • Web system for analysis of genomic tracks • Tens of custom-built tools • Thousands of collected tracks
Page 10: Prove your point! - depot.galaxyproject.org · The Genomic HyperBrowser • Web system for analysis of genomic tracks • Tens of custom-built tools • Thousands of collected tracks
Page 11: Prove your point! - depot.galaxyproject.org · The Genomic HyperBrowser • Web system for analysis of genomic tracks • Tens of custom-built tools • Thousands of collected tracks

Publications

• Main publication

• The Genomic HyperBrowser: inferential genomics at the sequence level

• Methodology publications

• The differential disease regulome

• Identifying elemental genomic track types and representing them uniformly

• Sequential Monte Carlo multiple testing

• Application publications

• Genomic Regions Associated with Multiple Sclerosis Are Active in B Cells

• Vitamin D receptor binding, chromatin states and association with multiple sclerosis

Page 12: Prove your point! - depot.galaxyproject.org · The Genomic HyperBrowser • Web system for analysis of genomic tracks • Tens of custom-built tools • Thousands of collected tracks

The team

Eivind Tøstesen

Sigve Nakken

Halfdan Rydbeck

Geir Kjetil Sandve

Trevor ClancyFang Liu

Sveinung Gundersen

Ingrid K. Glad

Lars Holden

Arnoldo Frigessi

Knut Liestøl

Eivind Hovig

Morten Johansen

Marit Holden

Vegard Nygaard

Egil Ferkingstad