pglo™ transformation. central framework of molecular biology dna rna proteintrait

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pGLO™ Transformation

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Page 1: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

pGLO™ Transformation

Page 2: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

Central Framework of Molecular Biology

DNA RNA Protein Trait

Page 3: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

Links to Real-world • GFP is a visual marker

• Study of biological processes (example: synthesis of proteins)

• Localization and regulation of gene expression

• Cell movement

• Cell fate during development

• Formation of different organs

• Screenable marker to identify transgenic organisms

Page 4: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

Using GFP as a biological tracer

http://www.conncoll.edu/ccacad/zimmer/GFP-ww/prasher.htmlWith permission from Marc Zimmer

Page 5: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

Transformation Procedure Overview

Day 1

Day 2

Page 6: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

What is Transformation?

• Uptake of foreign DNA, often a circular plasmid

GFP

Beta-lactamase

Ampicillin

Resistance

Page 7: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

What is a plasmid?

• A circular piece of autonomously replicating DNA

• Originally evolved by bacteria

• May express antibiotic resistance gene

or be modified to express proteins of interest

Page 8: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

Bacterial DNA

Plasmid DNA

Bacterial cell

Genomic DNA

Page 9: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

GeneExpression

• Beta Lactamase– Ampicillin resistance

• Green Fluorescent Protein (GFP)– Aequorea victoria

jellyfish gene

• araC regulator protein– Regulates GFP

transcription

Page 10: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

Bacterial Transformation

Beta lactamase(ampicillin resistance)

pGLO plasmids

Bacterial chromosomal DNA

Cell wall

GFP

Page 11: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

Transcriptional Regulation

B A DaraC

B A DaraC

RNA Polymerase

Effector (Arabinose)

araC B A D

ara Operon

RNA Polymerase

araC

ara GFP Operon

GFP Gene

araC GFP Gene

araC GFP Gene

Effector (Arabinose)

Page 12: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

Methods of Transformation

• Electroporation– Electrical shock makes cell membranes

permeable to DNA

• Calcium Chloride/Heat-Shock– Chemically-competent cells uptake DNA after

heat shock

Page 13: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

Reasons for Performing Each Transformation Step?

1. Transformation solution = CaCI2

Positive charge of Ca++ ions shields negative charge of DNA phosphates

Ca++

Ca++

OCH2

O

P O

O

OBase

CH2

O

P

O

O

O

Base

OH

Sugar

Sugar

OCa++

Page 14: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

Why Perform Each Transformation Step?

2. Incubate on iceslows fluid cell membrane

3. Heat-shockIncreases permeability of membranes

4. Nutrient broth incubationAllows beta-lactamase expression

Beta-lactamase(ampicillin resistance)

Cell wall

GFP

Page 15: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

What is Nutrient Broth?

• Luria-Bertani (LB) broth

• Medium that contains nutrients for bacterial growth and gene expression– Carbohydrates– Amino acids– Nucleotides– Salts– Vitamins

Page 16: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

Grow? Glow?

• Follow protocol

• On which plates will colonies grow?

• Which colonies will glow?

Page 17: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

Transformation Procedure Overview

Day 1

Day 2250ul

1000ul

Page 18: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait
Page 19: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait
Page 20: PGLO™ Transformation. Central Framework of Molecular Biology DNA RNA ProteinTrait

http://www.youtube.com/user/academiadeciencia

http://www.youtube.com/user/academiadeciencia#p/a/u/0/QRVaryEQOVk