pfu documentation services from the nordic gene bank (2006)

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Documentation Services from NGB, PFU-meeting for NP-leaders or their representatives, October 9, 2006 Documentation services for the Nordic Countries

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Documentation services offered for the Nordic national programs from the Nordic Gene Bank (NGB). 9th October 2006.

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Page 1: PFU Documentation services from the Nordic Gene Bank (2006)

Documentation Services from NGB, PFU-meeting for NP-leaders or their representatives, October 9, 2006

Documentation services for the Nordic Countries

Page 2: PFU Documentation services from the Nordic Gene Bank (2006)

Documentation Services from NGB, PFU-meeting for NP-leaders or their representatives, October 9, 2006

Documentation services for the Nordic Countries

Shared information portal [www.nordgen.org].

Assistance and coordination for regional Nordic and Baltic IT cooperation.

SESTO is already a regional PGR documentation system.

Shared resources like databases of contacts, projects, networks, pictures, documents, taxonomy, etc.

Database assistance during national inventory of cultivated plants, garden plants etc. [ex. POM].

Publish national datasets in ECP/GR, EURISCO, GBIF, WIEWS etc.

National staff from the individual germplasm collections will still need to manage and update their own datasets.

Page 3: PFU Documentation services from the Nordic Gene Bank (2006)

Documentation Services from NGB, PFU-meeting for NP-leaders or their representatives, October 9, 2006

Shared information portal [www.nordgen.org].

The new online information portal is available to the Nordic programs for genetic resources.

A generic model for remote administration of a web site is developed and offered as a tool to Nordic projects.

[http://www.nordgen.org]

Page 4: PFU Documentation services from the Nordic Gene Bank (2006)

Documentation Services from NGB, PFU-meeting for NP-leaders or their representatives, October 9, 2006

The SESTO platform

NGB can offer remote access to the SESTO germplasm documentation system for administration of national datasets of national genebank collections.

Staff representing different germplasm collections in Estonia, Latvia and Lithuania is already using SESTO logging in remotely from their home institute.

Page 5: PFU Documentation services from the Nordic Gene Bank (2006)

Documentation Services from NGB, PFU-meeting for NP-leaders or their representatives, October 9, 2006

Some genebank collections presented in SESTO

SESTO [http://www.ngb.se/sesto/] is a regional genebank documentation system

Page 6: PFU Documentation services from the Nordic Gene Bank (2006)

Documentation Services from NGB, PFU-meeting for NP-leaders or their representatives, October 9, 2006

SESTO was developed as the NGB documentation system. The application is later expanded to serve genebanks of the whole region (2003-2005).

The main purpose of SESTO is management of the plant material in the genebank seed store.

Extensions to better manage data on ex situ fruit collections are under development.

Page 7: PFU Documentation services from the Nordic Gene Bank (2006)

Documentation Services from NGB, PFU-meeting for NP-leaders or their representatives, October 9, 2006

The genebank staff have personal passwords and can edit the online data from the same interface as presented to public visitors.

The edit rights are individual corresponding to the relevant responsibilities at each genebank institute.

Page 8: PFU Documentation services from the Nordic Gene Bank (2006)

Documentation Services from NGB, PFU-meeting for NP-leaders or their representatives, October 9, 2006

The genebanks included in SESTO share data like for example the taxonomic species database and the common picture archive.

Page 9: PFU Documentation services from the Nordic Gene Bank (2006)

Documentation Services from NGB, PFU-meeting for NP-leaders or their representatives, October 9, 2006

Page 10: PFU Documentation services from the Nordic Gene Bank (2006)

Documentation Services from NGB, PFU-meeting for NP-leaders or their representatives, October 9, 2006

© Many of the images included to the picture archive are free to use for any non-commercial, journalistic or private use. The contributors of the individual pictures choose themselves if the image is: For genebank use only (1), Free to use for non-commercial purposes (2) or Public domain (3).

Page 11: PFU Documentation services from the Nordic Gene Bank (2006)

Documentation Services from NGB, PFU-meeting for NP-leaders or their representatives, October 9, 2006

•NGB can offer to publish and automatically update national datasets to the relevant germplasm data catalogues.

•EURISCO is a European catalogue of the plant genetic resources conserved ex situ in Europe.

•Various Central Crop Databases from the ECP/GR complete the EURISCO with more crop specific data.

•The WIEWS from FAO is an important tool for world food security.

Page 12: PFU Documentation services from the Nordic Gene Bank (2006)

Documentation Services from NGB, PFU-meeting for NP-leaders or their representatives, October 9, 2006

•NGB can offer to publish national datasets as web services in a format compatible with the GBIF and the future EURISCO data portal.

•GBIF is a global data portal to biodiversity information resources and an important channel to promote the utilization of the Nordic datasets.

Page 13: PFU Documentation services from the Nordic Gene Bank (2006)

Documentation Services from NGB, PFU-meeting for NP-leaders or their representatives, October 9, 2006

NGB can offer web forms and database assistance during national inventory projects for cultivated plants.

Example: POM in Sweden

Example: Plantearven in Norway

Page 14: PFU Documentation services from the Nordic Gene Bank (2006)

Documentation Services from NGB, PFU-meeting for NP-leaders or their representatives, October 9, 2006

Thank you for

listening!