oral defense ppt
TRANSCRIPT
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A Neuron Emulator and Headstage Circuit for Patch Clamp Setups
2012/7/30吳彥徵 (Yen-Chen Wu)
Advisor: Prof. Robert Rieger
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Outline
• Introduction• Objectives & Features• Circuit Design and Simulated Results• Hardware Implementation• Conclusions and Future Work
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Outline
• Introduction• Objectives & Features• Circuit Design and Simulated Results• Hardware Implementation• Conclusions and Future Work
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Introduction
• Membrane Potential• Hodgkin-Huxley Model• Voltage Clamp & Patch Clamp Techniques
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Cell
type
RP
(mV)
AP
increase
(mV)
AP
duratio
n (ms)
Threshold
potential
(mV)
Neuron axon
hillock −70 ~ −90 110 0.75 -55
Membrane Potential
AP of neuron axon hillock
Actively Passively
Positive
Negative
Spike train
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Hodgkin-Huxley Model
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Voltage Clamp & Patch Clamp Techniques
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Outline
• Introduction• Objectives & Features• Circuit Design and Simulated Results• Hardware Implementation• Conclusions and Future Work
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Objectives & Features
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Outline
• Introduction• Objectives & Features• Circuit Design and Simulated Results• Hardware Implementation• Conclusions and Future Work
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Circuit Design and Simulated Results
• Neuron Emulator Specification and Headstage CircuitCell Model with AP Generation Simplified Model for the Neuron Cell Simplified AP Generator
• Headstage AmplifiersNeuron Emulator in C_CNeuron Emulator in V_C
• Comparison with CV-7B HeadstageCV-7B Headstage in C_CCV-7B Headstage in V_C
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Neuron Emulator and Headstage Circuit Specification
Membrane model AP model Threshold range Voltage sources Electrode Headstage
Rm Cm τm Rap Cap τap Vth fap Vspike Vrest Re Iclamp
5
MΩ
10
pF
0.05
ms
5
KΩ
1
μF
5
ms
-60~-30
mV
1~10
Hz
20
mV
-90
mV
22
MΩ
6~12
nA
Size τap
Speed
Vp-p
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Cell Model with AP Generation (1)
)()1)(()1)((1
2
1
2
43
4
1
2
43
4
RRV
RR
RRRV
RR
RRRVV KrestNaap
KNarest VVV
Na K
adder
4321 RRRR
Na
K
Bigger
Bigger
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Simplified Model for the Neuron Cell
Switch phase Time constant Voltage sources
φde φre τNa τK VpK VpNa Vrest
High Low 0.05 ms 0.15 ms32 mV 72 mV 0 V
Low High 0.25 ms 0.45 ms
linear
nonlinear
φde
φre
slower
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Simplified AP Generator(1)
Membrane model AP model Voltage sources Electrode
Rm Cm τm Rap Cap τap Vspike Vrest Re
5 MΩ 10 pF 0.05 ms 5 KΩ 1 μF 5 ms 20 mV -90 mV 22 MΩ
SmallerBigger
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Simplified AP Generator(2)
ap
t
restspikemclamprestclamp eVVRIVV
)(:apφmclamprestclamp RIVV :rφ
φap
φr
Iclamp = 8 nA
Iclamp = 0 nA
Pre-chargeDischarge
Bigger
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Circuit Design and Simulated Results
• Neuron Emulator Specification and Headstage CircuitCell Model with AP Generation Simplified Model for the Neuron Cell Simplified AP Generator
• Headstage AmplifiersNeuron Emulator in C_CNeuron Emulator in V_C
• Comparison with CV-7B HeadstageCV-7B Headstage in C_CCV-7B Headstage in V_C
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Headstage Amplifiers
Current Clamp Amplifier
Voltage Clamp Amplifier
AdderIntegratorHPF
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Neuron Emulator circuit for current clamp experimentcurrent clamp experiment.
m
restclamp
e
clampeclamp R
VVRVV
I
mclamprestclamp RIVV
of
ifI R
RA
Shaded areas will be implemented on a microcontroller(see Appendix A)
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Neuron Emulator parametric analysis circuit simulation results in C_C
Condition Iclamp = 10 nA, fap = 6.25 Hz, τap = 5 ms
Probe point Vclamp Ve
Vpp
Vm~VM
110 mV
-40~70 mV
110 mV
180~290 mV
Condition Vth = -60 ~ -30 mV → Iclamp = 6 ~12 nA, τap = 5 ms
Iclamp 5 nA 6 nA 12 nA 13 nA
Vclamp
-65 mV-60 mV -30 mV
-25 mVVrest
Vap / Vm~VM -60~50 mV -30~80 mV
Vpp 0 V 110mV 0 V
fap 0 Hz 1 Hz 10 Hz 0 Hz
1Hz10Hz
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Neuron Emulator for voltage clamp experimentvoltage clamp experiment.
Shaded areas will be implemented on a microcontroller
(see Appendix A)
apclamp
eap
t
eclampe
dtRIRIRC
)(1
0int
eapeclampclampe RIRIVV m
eV R
RA
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Neuron Emulator parametric analysis circuit simulation result in V_C
Iclamp = 10 nA, fap = 6.67 Hz, τap = 5 ms
Qap
110 pC 2.42 mV
T
apdtV0
Condition τap = 5 ms
Vrest / Vclamp-65 mV -60 mV -30 mV
2.42 mV
Qap110 pC
Iclamp5 nA 6 nA 12 nA
fap0 Hz 1 Hz 10 Hz
T
ap dtV0
apapm
t
restspikeap CR
ReVV
Qap
)(
T
ap dtV0
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Circuit Design and Simulated Results
• Neuron Emulator Specification and Headstage CircuitCell Model with AP Generation Simplified Model for the Neuron Cell Simplified AP Generator
• Headstage AmplifiersNeuron Emulator in C_CNeuron Emulator in V_C
• Comparison with CV-7B HeadstageCV-7B Headstage in C_CCV-7B Headstage in V_C
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Comparion with CV-7B Headstage
O C
O
C
Ie = If = Vcmd / Rf.
Vp – Vo = If ·Rf
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CV-7B Headstage in C_C
Condition τap = 5 ms, T = 200 ms
Iclamp = If 1 nA 6 nA 12 nA
Vcomd50 mV 300 mV 600 mV
Vp = Ve (Vm~VM) -65~45 mV 70~180 mV 235~345 mV
Vclamp -85~25 mV -60~50 mV -30~80 mV
Vpp 110 mV
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CV-7B Headstage in V_C
Condition τap = 5 ms, Vp = -60 mV, Iclamp = 1.2 nA
Ve = Vp -60 mV
Vrest = Vclamp Vpp = 110 mV, spike:-85~25 mV
Iclamp Ipp = 5 nA, 1.1~-3.9 nA
110mV / 22Mohm=5nA
22Mohm
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Outline
• Introduction• Objectives & Features• Circuit Design and Simulated Results• Hardware Implementation• Conclusions and Future Work
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Hardware Implementation
• Choice of ComponentsMicroprocessor Programming
• Printed Circuit Board Operation• Experimental Results
Results of Current Clamp ModeResults of Voltage Clamp Mode
• Results of Neuron Emulator Mode for CV-7B HeadstageCV-7B Headstage in C_CCV-7B Headstage in V_C
• Comparison
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Choice of Components
Oscilloscope function
AP Generator
Headstage
KAI 1
1VVAv /4.4
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Microprocessor Programming
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Hardware Implementation
• Choice of ComponentsMicroprocessor Programming
• Printed Circuit Board Operation• Experimental Results
Results of Current Clamp ModeResults of Voltage Clamp Mode
• Results of Neuron Emulator Mode for CV-7B HeadstageCV-7B Headstage in C_CCV-7B Headstage in V_C
• Comparison
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Printed Circuit Board Opearation
Mode/Switch C_C V_C
Current clamp mode 1 0
Voltage clamp mode 0 1
Neuron emulator mode 0 0
15 x 10 cm2
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Hardware Implementation
• Choice of ComponentsMicroprocessor Programming
• Printed Circuit Board Operation• Experimental Results
Results of Current Clamp ModeResults of Voltage Clamp Mode
• Results of Neuron Emulator Mode for CV-7B HeadstageCV-7B Headstage in C_CCV-7B Headstage in V_C
• Comparison
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Results of Current Clamp ModeVclamp (CH1), Ve (CH2), φap (CH3) as the clamp current Iclamp is varied.
Iclamp = 0 nA
-63mV
-30mV
Vpp,Avg=80~90 mVVpp,Max=102 mV
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Results of Voltage Clamp Mode
dtIRVV
R
dtCHCH
ap
t
e
clampe
e
t
)()21(
0
0
tRVV
e
clampe
ap
t
ape
m QdtVR
tftf 0
11)()(
Vpp=330mV / 4.4V/V=75mV
f=2.481Hz
400pC / 5=80pC
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Hardware Implementation
• Choice of ComponentsMicroprocessor Programming
• Printed Circuit Board Operation• Experimental Results
Results of Current Clamp ModeResults of Voltage Clamp Mode
• Results of Neuron Emulator Mode for CV-7B HeadstageCV-7B Headstage in C_CCV-7B Headstage in V_C
• Comparison
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CV-7B Headstage in C_C
Voffset=-95.69 mV
Vpp=85 mV→Cp=5 pF
Stop!
Vp=Ve=315.8mV
If=Iclamp=12nA
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CV-7B Headstage in V_C
Voffset=-95.69 mV
Ipp=3.6 nA
Ipp X Re=79.2 mV
f=2.5Hz
Close to C_C result, 85mV
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Hardware Implementation
• Choice of ComponentsMicroprocessor Programming
• Printed Circuit Board Operation• Experimental Results
Results of Current Clamp ModeResults of Voltage Clamp Mode
• Results of Neuron Emulator Mode for CV-7B HeadstageCV-7B Headstage in C_CCV-7B Headstage in V_C
• Comparison
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Comparison (1)
A Neuron Emulator Headstage Circuit for Patch Clamp Setups A Neuron Emulator for Single-Electrode Settings [21]
Components Power supply voltage (V) Components Power supply voltage (V)
PIC18F4550 0 ~ 3.5 PIC18F2520 -1.5 ~ 1.5
TL082 0 ~ 9 -2.5 ~ 2.5
ADC in PIC 1.55 ~ 3.35 -0.1 ~ 1.5
CD14016BE 0 ~ 3.5 -2.5 ~ 2.5
Battery 0 ~ 9
Hedstage
LF355N 0 ~ 9
LM334 0 ~ V+
LM317 0 ~ 9
Electrode Membrane model Action potential model Low-pass filter
Re Rm Cm τm Rap Cap τap Rlpf Clpf τlpf
A Neuron Emulator
for Single-Electrode Settings [21]22 MΩ 5 MΩ 10 pF 0.05 ms
5 MΩ 1 nF
5ms
26 KΩ 10 μF 260 ms
A Neuron Emulator Headstage Circuit
for Patch Clamp Setups5 KΩ 1 μF
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Comparison (2)
Priceless
Portable
Energy
Saving
Functionality
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Outline
• Introduction• Objectives & Features• Circuit Design and Simulated Results• Hardware Implementation• Conclusions and Future Work
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Conclusions and Future Work
• Provide the passive and active electrical properties passive and active electrical properties of a neuron as seen
from a single electrode.
• Each AP generates a well defined charge 110 mV, 110 mV, ττapap=5ms=5ms. The AP firing
rate from 1 Hz to 10 Hz1 Hz to 10 Hz is dependent on the RP level in the threshold
range from -60 mV to -30 mV-60 mV to -30 mV.
• Measured results confirm the circuit design is in agreement with the
simulation results by Cadence software.
• The headstage circuit is implemented for providing the clamp current to
observe the voltage and current properties of the neuron emulator.
Continue the development of neural oscillator project.
Make the achievements of the thesis realized in a chip (ASIC).
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Appendix A. Equivalent circuits representing the function provided by the microcontroller
A1. 2nd - LPF
A2. VCO
A3. Threshold Comparator
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2nd - LPF
21212221
2
2121
22
2
1)11(
1
))(()(
lpflpflpflpflpflpflpflpf
lpflpflpflpf
oo
o
CCRRs
RRRRs
CCRR
sQ
s
GsH
)/(062832.01
2121
sradCCRR lpflpflpflpf
o 31.0)( 121
2121
lpflpflpf
lpflpflpflpf
CRR
CCRRQG = 1
0.01
Filter
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VCO (1)
Shifting Amplifier VCO
Vrest Vconst. Vf gm Cf Vctrl fap
-60~-30 mV 63.3 mV 3.3~33.3 mV 0.09 μ 100 pF 3 V 1~10 Hz1Ω
.constrestf VVV
ctrlf
mfap VC
gVf
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VCO (2)
1Hz10Hz 5Hz
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Threshold Comparator
Double Comparator
Input
And Gate
Input
Multiplexer
Control InputVm
Vrest V≧ thH 01 0 Vrest
VthL < Vrest < VthH 11 1 Vclamp
Vrest V≦ thL 10 0 Vrest
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A Neuron Emulator and Headstage Circuit for Patch Clamp Setups
Yen-Cheng [email protected]
Electrical Engineering DepartmentNational Sun Yat-Sen University
Taiwan
Thank you for your attention!Thank you for your attention!