open notebook science: research in real-time
DESCRIPTION
A presentation I gave to students at the New Mexico Graduate and Professional Student Conference. Open science is the future of science, and open notebook science is the future of how scientific information is accessed and propagated. Here I present examples from my notebook and from a case study of an open notebook community (Physics 308L Junior Lab).TRANSCRIPT
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Open Notebook ScienceResearch in Real-Time
by anthony salvagnoresearch.iheartanthony.com
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how is science traditionally
carried out?
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closed & isolated
and the outcome...
ideas results
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...is peer review publication
writingformattingacceptance
inaccessiblelimited
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peer review is designed to weed outmisinformation...
...but now there are so many journalsscientists will eventually get published.
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What is the alternative?
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open science
open access
data methods
reinventingdiscovery
outreach
publicaccess
citizenscience
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open notebook science
and that record includes...
...the practice of making the entire primary record of a research project publicly available online as it is recorded.
“
”
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project intro in notebook
project inception,
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project plan on mindmeister
plannning,
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protocols,
how to seal a sample
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equipment,
equipment list with links to sources
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data,
tobacco seed growth in heavy watervia google docs and figshare
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and conclusions.
recap of trial 4 from tobacco seedgrowth experiment
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what are the
Key aspects of
Open notebook science?
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communication
provenance
repeatability
transparency
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What’s in it For me?
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real-timepeer review
andcollaboration
warm fuzzies(outreach)
lots ofpublications
open notebookscience
measurableimpact
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What’s the catch?
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can you still publish in a journal?
will my notebook be around when I’m dead?
how many people are doing this?
would anyone even read my notebookand comment in it?
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right now the ons community is smalland diverse
so...
this makes it hard to understand how collaboration and peer review would work in this environment
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Physics 308L Junior lab:
the ons case study
2012juniorlab.iheartanthony.com
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12 students 2 groups(mon & wed)
electronics lab
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the rules:
1
2
3
pick any notebook platform
must read and comment ineach others’ notebooks
“cheat” when able
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results (still in progress):
benefitted from collaboration
prefer electronic notebook format
learned how to use collaborativetools for science
had to be encouraged to “cheat”found it useful
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What’s next for open
notebook science?
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the bottom up approach:
teach students the benefits of ons
convince professors that going open isn’t a sacrifice
find and propogate ons successstories
reu/igert training specifically foropen science
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the top down approach:
help develop open science tools
fix archival issues
find the ideal open notebookplatform
require open access for funding
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The End
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busting science openiheartanthony, do you?