north locality spoke stakeholder event professor t.n. arvanitis - 29/11/2013 how to innovate in...
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
How to innovate in healthcare through digital technologies and informatics
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Theodoros N. Arvanitis, RT, DPhil, CEng, MIET, MIEEE, AMIA, FSIM, FRSM
Professor of e-Health InnovationInstitute of Digital Healthcare, WMG, University of Warwick
Birmingham Children’s Hospital NHS Foundation Trust
North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
Digital Healthcare
• Digital healthcare is the application of appropriate digital technologies to the promotion of – wellbeing & prevention; – management of disease; – and delivery of health services that are
effective, efficient and of high quality
• Challenges– Healthcare is the slowest adopter of
digital technology– Big Data is coming – West Mids
population 5.6m.– Fragmented landscape: many
standalone digital applications from academia, industry, NHS
– Need for interoperability– Need for translation and adoption
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
WM AHSN Digital Work Streams
• On-line Healthcare and Clinical Delivery– real and tangible impact by delivering crucial on-line healthcare interventions
• Digital Innovation Management– an environment within which all innovations can be efficiently researched,
prototyped, invested in, evaluated, commercialised and distributed • Enabling Digital Communications
– leverage the skills and abilities of its various partners, customers and consumers at scale
• Enabling Technology and Informatics– local, national and international innovations
• Digital investment, Commercial and Wealth Management– ability to attract new finance for digital investment, as well as create innovative
partnerships
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
Exemplars of healthcare innovation
• Two local exemplars with international impact
• Translating research knowledge to practice– TRANSFoRm
• Working with Big Data– Multimodal Imaging for Childhood Cancer Research and
Practice
• Institute of Digital Healthcare
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
The Institute of Digital Healthcare
• A world-class £4M 5-year funded partnership between the NHS, WMG, WMS and other relevant organisations
• Aims: to improve people’s health and wellbeing through the use of innovative digital technologies and methodologies
• We do this through high quality research, education and training capabilities
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
Our USP
WMG: Industry
engagement
WMS: Clinical
need and relevance
NHS: Reality check & ‘needs’
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
IDH – innovation and research I
Biomedical & Health Informatics
Clinical & Public Health Knowledge
Clinical Trial Systems
Patient & Population DataDeri
ving New Knowledge & Measure Performance
Clinical Guidance & Decision Support Systems
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
Brain imaging
Clinical Imaging methodology and trials
Neuro-imaging statistics
ModellingMeta-analysisfMRI clinical trials
In vivo metabolomics &
Functional Imaging
(childhood cancer, metabolic disease)
Neuro-degenerative disease
(epilepsy,
sleep disorders)
Human Brain Connectome
IDH – innovation and research II
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
Healthcare Technologies
Biomedical Signal Processing
Visualisation, Modelling and simulation
Brain Electro-physiology (EEG) & BCI
Physiological Monitoring – Healthcare Sensors
IDH – innovation and research III
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
eHealth Innovation
Apps & Social Media
Telehealth
Evaluation
Implementation
IDH – innovation and research IV
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
Health Systems Engineering & Modelling
Care QualityService Delivery Improvements
Impact of Pathway Variation Analysis on Quality Threshold
Impact of Pathway Variation Analysis on Patient Care
Impact of Pathway Variation Analysis on cost: Hospital Operation
IDH – innovation and research V
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
• Development of Clinical Trial Management Systems that provide, through an integrated infrastructure, a wide-ranging set of modular, interoperable and standards based tools designed to meet the needs of clinical trials
• Objectives of e-trials system implementation– To define a “computable” model representation that
supports the entire life-cycle of clinical trials protocol,
– To develop appropriate tools that use the model representation.
translating research into clinical practice
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
Specific research
knowledge
Actionable knowledge
Routinely collected
knowledge
knowledge in healthcare
• Clinical trials• Controlled populations• Well-defined questions
• EHR systems• Wide coverage• Vast quantity• May lack in
detail and quality
• Distilled scientific findings
• Usable in clinical practice
• Decision support
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
ePCRN and TRANSFoRm: US/UK perspective
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
Informatics tower of Babel: the grand challenge
• Overwhelming volume of data• Multitude of sources • Each part of the health
community speaks its own scientific “dialect” (e.g. lab values, genetic profile, clinical data)
• Lack of consensus on common standards and terms
• Lack of coordination across, and collaboration within, the cancer research enterprise
• Integration is critical to achieve promise of molecular medicine (personalised medicine)
Slide courtesy of caBIG™
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
TRANSFoRm Itegrated VS
• The TRANSFoRm Integrated Vocabulary Service is designed to allow end users to search and retrieve clinical vocabulary concepts and associated content – a web interface and a web service API– the service uses the LexEVS (version 5.1)
technology to access a backend UMLS vocabulary database
– the service uses direct Java Database Connectivity (JDBC) to access other vocabulary databases (e.g. Read Codes V2, ICPC2)
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
RCD v2/ICPC2• Read Codes (RCDv2) and International
Classification of Primary Care (ICPC2) corpus of terms and their associated mappings– created to cater for the initial need of the
existence of specific primary care oriented terminologies.
• The UK NHS Connecting for Health Terminology Centre - mappings from Read Codes version 2 to SNOMED CT.
• The Read Codes v2 database in Transform VS is set up based on this mapping so that Read Codes 2 concepts can be linked to a UMLS search. Similar approach for ICPC2.
• ICPC2-ICD10 Thesaurus and mappings - Transition Project @ University of Amsterdam
• The TRANSFoRm team is updating the ICPC2-ICD 10 mapping and Thesaurus
• ICPC3: new initiative
UMLS Metathesaurus
Read Codes v2 Codes
SNOMED CT Codes
ICPC2 Codes
ICD-10 Thesaurus/Codes
UMLS Metathesaurus
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
TRANSFoRm Integrated VS Server Architecture
TRANSFoRm Integrated VS Server
Query Service
Read Codes v2Database
Metro JAX-WS Web Service
LexEVS Runtime
GWTRPC Servlet
UMLS Database
Lucene IndexGWT Ajax Web
Client
Web Services Client
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
A screenshot of the vocabulary service web-based interface
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
Finding prevalent cases for trials
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
acknowledgments: TRANSFoRm Consortium
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
BIG Data: multi-modal imaging
Investigating children’s cancer using functional
imaging
Metabolite maps
Metabolite profiles Diffusion imaging
Tractography
Perfusion
Quantitative imaging
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
Powerful Computation
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
large data sets
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HR-MAS
NAA
Cho
Cr
mI Lip+Lac
w2 1H
w1
13C
1H-13C HSQC
North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
agent-based classifiers
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
acknowledgments: cancer research
• Investigators– Andrew Peet – UB PI, oncology,
MRS– Theo Arvanitis – UW bio-informatics– Richard Grundy – UN oncology,
biology– Martin Leach – ICR MR Physics,
perfusion– Chris Clark – ICH MR Physics,
diffusion– Franklyn Howe – StGUL MR
Physics, MRS
Collaborators• Professor Dr Dorothee Auer University of
Nottingham • Dr Thomas Barrick St George's Hospital Medical
School • Mr David Collins Royal Marsden Hospital • Dr Daniel Ford University Hospital Birmingham• Dr Darren Hargrave Royal Marsden Hospital• Mr Donald Macarthur Nottingham University
Hospitals NHS Trust • Dr Lesley MacPherson Birmingham Children’s
Hospital NHS Trust • Dr Paul Morgan University of Nottingham • Dr Kal Natarajan University Hospital
Birmingham• Dr Oystein Olsen Great Ormond Street Hospital• Dr Geoffrey S Payne The Institute of Cancer
Research • Professor Andy Pearson Royal Marsden
Hospital • Dr Sucheta Vaidya St George's Hospital Medical
School • Dr Tim Jaspan, University Hospital, Nottingham• Dr Dawn, Saunders, Great Ormond Street
Hospital
Research Group: Nigel Davies, Martin Wilson, Kal Natarajan, Yu Sun, Eleni Orphanidou, Lisa Harris, Greg Reynolds, Sim Gill, Alex Gibb, M. Saleh, Suchada Tantisatirapong, Ben Babourina-Brooks, Jan Novak
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
Digital HealthcareEvaluate & generate evidence
Support innovation
research and innovation
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North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
realising our imagination: facing challenges
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"Leave the beaten track occasionally and dive into the woods. Every time you do so, you will be certain to find something that you have never seen before. Follow it up, explore all around it, and before you know it, you will have something worth thinking about to occupy your mind. All really big discoveries are the result of thought."
Alexander Graham Bell: "electrical speech machine" of 1876
North Locality Spoke Stakeholder EventProfessor T.N. Arvanitis - 29/11/2013
Thank you
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