molecular evolution and taxonomy of freshwater and ...molecular evolution and taxonomy of freshwater...

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Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik Leliaert, Michala Klimešová, Veronica Malavasi, Alena Lukešová

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Page 1: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Molecular evolution and taxonomy of

freshwater and terrestrial Ulvophyceae

Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik Leliaert, Michala Klimešová,

Veronica Malavasi, Alena Lukešová

Page 2: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Chlorophyta, Ulvophyceae

• usually macroscopic organisms

• prevalently marine algae

Ulva

Codium Trentepohlia

Page 3: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Ulvophyceae – thallus types

Page 4: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Ulvophyceae – various ecological habitats

• Marine, brackish, freshwater, terrestrial, epiphytic or endophytic on algae, endozoic in sponges, epizoic on turtles, ...

Page 5: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Ulvophyceae – phylogeny

Leliaert et al. 2012

Page 6: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Ulvophyceae – phylogeny

Fučíková et al. 2014 Turmel et al. 2017

Page 7: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

O‘Kelly et al. 2004

Page 8: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Škaloud et al. 2013

Page 9: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Goals

• Resolving the higher taxonomy of Ulvophytes

• Improving our knowledge on the diversity and evoution of freshwater and terrestrial Ulvophytes

• Taxonomic revision of polyphyletic genera

Page 10: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Methods

• 64 strains from 11 algal culture collections (ACOI, ASIB, CAUP, CCAC, CCALA, CCCryo, CCAP, CPCC, FACHB, SAG, UTEX) – incl. 12 types

• 36 strains from own sampling

• Molecular analyses (18S rDNA, ITS, rbcL, tufA)

• Morphological investigations (cell dimensions, shape of pyrenoids, pattern of filament branching, shape of colonies)

Page 11: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Higher taxonomy

• Resurrecting the order Chlorocystidales to make Ulvales and Ulotrichales monophyletic

Desmochloris

Page 12: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Higher taxonomy

• Validation of the order Ignatiales

Ignatius

Pseudocharacium

Page 13: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Higher taxonomy

• Ulvales: describing the family Pseudopleurococcaceae

Pseudopleurococcus

Page 14: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Higher taxonomy

• Ulotrichales: describing the families Hazeniaceae Planophilaceae Trichosarcinaceae Neocloniaceae Binucleariaceae

Trichosarcina

Page 15: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Problem of types

• Taxonomic position of Ulothrix • Uronema:

Ulothrix acuminata FACHB 1747

Ulothrix sp. FACHB 781

Ulothrix sp. CPCC 546

Ulothrix belkae SAG 34.86

Ulothrix acuminata UTEX 1178 T

Ulothrix Uronema Buchheim et al. 2011

Page 16: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

• Ulothrix tenuissima

Kützing 1833

• Timavo, Italy

Problem of types

• Taxonomic position of Ulothrix

Page 17: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Misientifications and ’’molecular’’ identifications

Microspora

Klebsormidium

Klebsormidium

Klebsormidium

Klebsormidium

Geminella

...

Binuclearia sp. CCAC 4824

Binuclearia sp. SAG 39.91

Ulothrix cf. variabilis CCCryo 149, 150

Ulothrix sp. CPCC 509, 568

Ulothrix crenulata SAG 35.86

Ulothrix sp. SAG 90.91

...

Page 18: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Misidentifications and ’’molecular’’ identifications

• Sluiman (1991): Gloeotilopsis planctonica – SAG 29.93

• Friedl (1996): new combinations for Rhexinema and Pleurastrum species

Page 19: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Misidentifications and ’’molecular’’ identifications

• Sluiman (1991): Gloeotilopsis planctonica – SAG 29.93

• Friedl (1996): new combinations for Rhexinema and Pleurastrum species

Iyengar & Philipose 1956

Page 20: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Misidentifications and ’’molecular’’ identifications

• Sluiman (1991): Gloeotilopsis planctonica – SAG 29.93

• Friedl (1996): new combinations for Rhexinema and Pleurastrum species

Page 21: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Misidentifications and ’’molecular’’ identifications

• Sluiman (1991): Gloeotilopsis planctonica – SAG 29.93

• Friedl (1996): new combinations for Rhexinema and Pleurastrum species

Turmel et al. 2017

Page 22: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Misidentifications and ’’molecular’’ identifications

• Friedl (1995): Pleurastrum insigne SAG 30.93 in Chlorophyceae

• Kawasaki et al. (2015): SAG 30.93 was overgrown by Chlorococcum already in 1994

Chodat 1894

Page 23: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Misidentifications and ’’molecular’’ identifications

• Friedl (1995): Pleurastrum insigne SAG 30.93 in Chlorophyceae

• Kawasaki et al. (2015): SAG 30.93 was overgrown by Chlorococcum already in 1994

Pleurastrum sarcinoideum (Tupa 1974)

Page 24: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Considerable cryptic diversity

• Pseudendoclonium morphotype in at least 4 indepenent lineages

Page 25: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Ecological consequences • numerous transitions between marine and freshwater habitats

• terrestrial taxa evolved from freshwater relatives

• broad ecological range of Pseudendoclonium

Page 26: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Freshwater Flora of Central Europe

• to be released early in 2018

Page 27: Molecular evolution and taxonomy of freshwater and ...Molecular evolution and taxonomy of freshwater and terrestrial Ulvophyceae Pavel Škaloud, Fabio Rindi, Christian Boedeker, Frederik

Thank you for your attention!

Ulotrichales Ulvales