lab session 3 protein salting-out iug,2012 tmz iug,2012 tmz

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Protein Salting-out IUG,2012 TMZ

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Page 1: Lab Session 3 Protein Salting-out IUG,2012 TMZ IUG,2012 TMZ

Protein Salting-outProtein Salting-out

IUG,2012TMZIUG,2012TMZ

Page 2: Lab Session 3 Protein Salting-out IUG,2012 TMZ IUG,2012 TMZ

Salting in / Salting outSalting in / Salting out• Salting IN• At low concentrations,

added salt usually increases the solubility of charged macromolecules because the salt screens out charge-charge interactions.

• So low [salt] prevents aggregation and therefore precipitation.

• Salting IN• At low concentrations,

added salt usually increases the solubility of charged macromolecules because the salt screens out charge-charge interactions.

• So low [salt] prevents aggregation and therefore precipitation.

• Salting OUT• At high concentrations

added salt lowers the solubility of macro-molecules because it competes for the solvent (H2O) needed to solvate the macromolecules.

• So high [salt] removes the solvation sphere from the protein molecules and they come out of solution.

• Salting OUT• At high concentrations

added salt lowers the solubility of macro-molecules because it competes for the solvent (H2O) needed to solvate the macromolecules.

• So high [salt] removes the solvation sphere from the protein molecules and they come out of solution.

Page 3: Lab Session 3 Protein Salting-out IUG,2012 TMZ IUG,2012 TMZ

General protocol for protein purificationGeneral protocol for protein purification

• Taking the intact Tissue.• Homogenisation • Getting rid of debris and insoluble stuff• Precipitation of protein with the salt( salting –

out)• Getting rid of salt excess by dialysis• Further purification by column and ion exchange

chromatography ,• Finding out the exact molecular weight by

Column chromatography and by SDS-Gel-electrophoresis

• Taking the intact Tissue.• Homogenisation • Getting rid of debris and insoluble stuff• Precipitation of protein with the salt( salting –

out)• Getting rid of salt excess by dialysis• Further purification by column and ion exchange

chromatography ,• Finding out the exact molecular weight by

Column chromatography and by SDS-Gel-electrophoresis

Page 4: Lab Session 3 Protein Salting-out IUG,2012 TMZ IUG,2012 TMZ

– Proteins require H2O molecules interacting with surface groups, in order to stay in aqueous solution (hydration).

– Salting out usually uses increasing concentrations of ammonium sulfate [(NH4)2SO4] to compete with the protein groups for the available H2O.

– Like all purification methods, salt fractionation has to be worked out empirically for each protein of interest

– Every protein in the solution has its own solubility

limits in ammonium sulfate, independent of the other proteins in the mixture.

– Proteins require H2O molecules interacting with surface groups, in order to stay in aqueous solution (hydration).

– Salting out usually uses increasing concentrations of ammonium sulfate [(NH4)2SO4] to compete with the protein groups for the available H2O.

– Like all purification methods, salt fractionation has to be worked out empirically for each protein of interest

– Every protein in the solution has its own solubility

limits in ammonium sulfate, independent of the other proteins in the mixture.

Fractional Precipitation ("salting out") Fractional Precipitation ("salting out")

Page 5: Lab Session 3 Protein Salting-out IUG,2012 TMZ IUG,2012 TMZ

In general, solubility of a given protein is independent of othersIn general, solubility of a given protein is independent of others

Page 6: Lab Session 3 Protein Salting-out IUG,2012 TMZ IUG,2012 TMZ

Why choosing (NH4)2SO4 for precipitation?Why choosing (NH4)2SO4 for precipitation?

• Has a wide range of application

• Very effective to ppt out water soluble proteins.

• These ions have stabilizing effect on protein

• You can do sequential ppt of your desired protein depending upon its molecular weight.

• Proteins are readily stored as ammonium sulfate ppt.

• Has a wide range of application

• Very effective to ppt out water soluble proteins.

• These ions have stabilizing effect on protein

• You can do sequential ppt of your desired protein depending upon its molecular weight.

• Proteins are readily stored as ammonium sulfate ppt.

Page 7: Lab Session 3 Protein Salting-out IUG,2012 TMZ IUG,2012 TMZ

In-lab experimentIn-lab experiment

• Principle

The experiment is based on the fact that ammonium sulfate neutralizes the charge on the protein molecules, and induces their dehydration-resulting in a protein precipitation (salting-out).

• Principle

The experiment is based on the fact that ammonium sulfate neutralizes the charge on the protein molecules, and induces their dehydration-resulting in a protein precipitation (salting-out).

Page 8: Lab Session 3 Protein Salting-out IUG,2012 TMZ IUG,2012 TMZ

• Half-saturationcauses ppt of gloubulins (less hydrophilic, larger molecular mass, compred to albumins)

• Complete saturationcauses ppt of albumins

• Half-saturationcauses ppt of gloubulins (less hydrophilic, larger molecular mass, compred to albumins)

• Complete saturationcauses ppt of albumins

Page 9: Lab Session 3 Protein Salting-out IUG,2012 TMZ IUG,2012 TMZ

Reagents & MaterialsReagents & Materials

- Saturated solution of (NH4)2SO4

- Finely powdered crystalline (NH4)2SO4

- Biuret reagent- Blood serum sample- Test tube stand with a set of test tubes- Filtering funnel- Filter paper

- Saturated solution of (NH4)2SO4

- Finely powdered crystalline (NH4)2SO4

- Biuret reagent- Blood serum sample- Test tube stand with a set of test tubes- Filtering funnel- Filter paper

Page 10: Lab Session 3 Protein Salting-out IUG,2012 TMZ IUG,2012 TMZ

ProcedureProcedure

1. 20 drops of blood serum are transferred in test tube.2. An equal volume of sat., ammonium sulfate solution is added (half-saturation soln.).3. Let soln stand for 5 min, and then filter the precipitate off.4. A powdered ammonium sulfate is added to the filtrate by small portions until no more visible dissolution of the salt added occurs (complete sat.,).5. Note albumin precipitate to form. Filter the precipitate off. 6. Check the filtrate for the absence of protein by applying the biuret test.

1. 20 drops of blood serum are transferred in test tube.2. An equal volume of sat., ammonium sulfate solution is added (half-saturation soln.).3. Let soln stand for 5 min, and then filter the precipitate off.4. A powdered ammonium sulfate is added to the filtrate by small portions until no more visible dissolution of the salt added occurs (complete sat.,).5. Note albumin precipitate to form. Filter the precipitate off. 6. Check the filtrate for the absence of protein by applying the biuret test.

Page 11: Lab Session 3 Protein Salting-out IUG,2012 TMZ IUG,2012 TMZ

Salting-out agent Sulfte ammonium solution saturation degree

Fraction of blood serum proteins to be ppt