fundamental building blocks: chemistry, water, and ph

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Fundamental Building Blocks: Chemistry, Water, and pH

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Page 1: Fundamental Building Blocks: Chemistry, Water, and pH

Fundamental Building Blocks:Chemistry, Water, and pH

Page 2: Fundamental Building Blocks: Chemistry, Water, and pH

2.1 Chemistry’s Building Block: The Atom

Page 3: Fundamental Building Blocks: Chemistry, Water, and pH

Chemistry’s Building Block: The Atom

• The fundamental unit of matter is the atom.

Page 4: Fundamental Building Blocks: Chemistry, Water, and pH

Protons, Neurons, and Electrons

• The three most important constituent parts of an atom are – protons – neutrons – electrons

Page 5: Fundamental Building Blocks: Chemistry, Water, and pH

Protons, Neurons, and Electrons

• Protons and neutrons exist in the atom’s nucleus, while electrons move around the nucleus, at some distance from it.

Page 6: Fundamental Building Blocks: Chemistry, Water, and pH

Chapter 2 Lecture

Figure 2.2

electronshell

electron(negative charge)

proton(positive charge)

neutron(no charge)

nucleus

Hydrogen (H) Helium (He)

Page 7: Fundamental Building Blocks: Chemistry, Water, and pH

Protons, Neurons, and Electrons

• Protons are positively charged.

• Electrons are negatively charged.

• Neutrons carry no charge.

Page 8: Fundamental Building Blocks: Chemistry, Water, and pH

The Element

• An element is any substance that cannot be reduced to any simpler set of constituent substances through chemical means.

• Each element is defined by the number of protons in its nucleus.

Page 9: Fundamental Building Blocks: Chemistry, Water, and pH

The Element

• The number of neutrons in an atom can vary independently of the number of protons.

• Thus, a single element can exist in various forms, called isotopes, depending on the number of neutrons it possesses.

Page 10: Fundamental Building Blocks: Chemistry, Water, and pH

The Element

Figure 2.5

1 proton1 neutron

1 proton0 neutrons

1 proton2 neutrons

Hydrogen Deuterium Tritium

Page 11: Fundamental Building Blocks: Chemistry, Water, and pH

The Element

PLAYPLAY Animation 2.1: Structure of Atoms, Elements, Isotopes: Part 1: Animation

PLAYPLAY Animation 2.1: Structure of Atoms, Elements, Isotopes: Part 2: Exercise 1

PLAYPLAY Animation 2.1: Structure of Atoms, Elements, Isotopes: Part 3: Exercise 2

Page 12: Fundamental Building Blocks: Chemistry, Water, and pH

The Element

• Protons are positively charged.

• Electrons are negatively charged.

• Neutrons carry no charge.

Page 13: Fundamental Building Blocks: Chemistry, Water, and pH

2.2 Matter is Transformed Through Chemical Bonding

Page 14: Fundamental Building Blocks: Chemistry, Water, and pH

Matter is Transformed Through Chemical Bonding

• Atoms can link to one another in the process of chemical bonding.

Page 15: Fundamental Building Blocks: Chemistry, Water, and pH

Covalent Bond

• Covalent bond: atoms share one or more electrons

• Ionic bond: atoms lose and accept electrons from each other

Page 16: Fundamental Building Blocks: Chemistry, Water, and pH

Covalent Bond

• Chemical bonding comes about as atoms “seek” their lowest energy state.

• An atom achieves this state when it has a filled outer electron shell.

Page 17: Fundamental Building Blocks: Chemistry, Water, and pH

Covalent Bond

• Hydrogen and helium require two electrons in orbit around their nuclei to have filledouter shells.

• Most other elements require eight electrons to have filled outer shells.

Page 18: Fundamental Building Blocks: Chemistry, Water, and pH

Covalent Bond

Figure 2.7

hydrogen (H)

carbon (C)

sodium (Na)

helium (He)

neon (Ne)

argon (Ar)

Unstable, very reactive atoms Stable, unreactive atoms

Outermost electronshells unfilled

Outermost electronshells filled

Page 19: Fundamental Building Blocks: Chemistry, Water, and pH

Covalent Bond

• A molecule is a compound of a defined number of atoms in a defined spatial relationship.

• For example, two hydrogen atoms can link with one oxygen atom to form one water molecule.

Page 20: Fundamental Building Blocks: Chemistry, Water, and pH

Covalent Bond

Figure 2.8

hydrogen (H)atom

hydrogen (H)atom

oxygen (O)atom

hydrogen (H)atom

hydrogen (H)atom

oxygen (O)atom

(b) One water molecule(a) Two hydrogen atoms and one oxygen atom

Page 21: Fundamental Building Blocks: Chemistry, Water, and pH

Covalent Bond

• Atoms of different elements differ in their power to attract electrons.

• The term for measuring this power is electronegativity.

Page 22: Fundamental Building Blocks: Chemistry, Water, and pH

Polar and Nonpolar Bonding

• Through electronegativity, a molecule can take on a polarity—a difference in electrical charge at one end compared to the other.

Page 23: Fundamental Building Blocks: Chemistry, Water, and pH

Polar and Nonpolar Bonding

• Covalent chemical bonds can be polar or nonpolar.

• A polar covalent bond exists when shared electrons are not shared equally among atoms in a molecule, due to electronegativity differences.

Page 24: Fundamental Building Blocks: Chemistry, Water, and pH

Polar and Nonpolar Bonding

Figure 2.9

polar

nonpolarbecausecharges aresymmetric

slightnegativecharge

slightpositivecharge

(a) Polar water molecule (b) Nonpolar methane molecule

Page 25: Fundamental Building Blocks: Chemistry, Water, and pH

Ionic Bonding

• Two atoms will undergo a process of ionization when the electronegativity differences between them are great enough that one atom loses one or more electrons to the other.

• This process creates ions: atoms whose number of electrons differs from their number of protons.

Page 26: Fundamental Building Blocks: Chemistry, Water, and pH

Ionic Bonding

• The charge differences that result from ionization can produce an electrostatic attraction between ions.

• This attraction is an ionic bond.

• When atoms of two or more elements bond together ionically, the result is an ionic compound.

Page 27: Fundamental Building Blocks: Chemistry, Water, and pH

Ionic Bonding

Figure 2.10

sodium atom (Na) chlorine atom (Cl)

chloride ion(Cl–)

sodium ion (Na+)

electrontransfer

ioniccompound(Na+Cl–)

salt crystals

(a) Initial instabilitySodium has buta single electronin its outer shell,while chlorine has seven, meaningit lacks only a single electron to have acompleted outer shell.

(b) Electron transferWhen these twoatoms cometogether, sodiumloses its third-shellelectron to chlorine,in the processbecoming a sodiumion with a netpositive charge(because it now hasmore protons thanelectrons). Havinggained an electron,the chlorine atombecomes a chlorideion, with a netnegative charge(because it hasmore electronsthan protons).

(c) Ionic attractionThe sodium and chlorideions are now attracted toeach other because theyare oppositely charged.

(d) Compound formationThe result of this electrostaticattraction, involving manysodium and chloride ions, is asodium chloride crystal (NaCl),better known as table salt.

Page 28: Fundamental Building Blocks: Chemistry, Water, and pH

Hydrogen Bonding

• Hydrogen bonding links an already covalently bonded hydrogen atom with an electronegative atom.

Page 29: Fundamental Building Blocks: Chemistry, Water, and pH

Hydrogen Bonding

• In water, a hydrogen atom of one water molecule will form a hydrogen bond with an unshared oxygen electron of a neighboring water molecule.

Page 30: Fundamental Building Blocks: Chemistry, Water, and pH

Hydrogen Bonding

Figure 2.11

hydrogen bond

Page 31: Fundamental Building Blocks: Chemistry, Water, and pH

Hydrogen Bonding

PLAYPLAY Animation 2.2: Chemical Bonding

Page 32: Fundamental Building Blocks: Chemistry, Water, and pH

2.3 Some Qualities of Chemical Compounds

Page 33: Fundamental Building Blocks: Chemistry, Water, and pH

Some Qualities of Chemical Compounds

• The three-dimensional molecular shape is important in biology because it determines the capacity molecules have to bind with one another.

Page 34: Fundamental Building Blocks: Chemistry, Water, and pH

Molecular Shape

Figure 2.13

good fit,scent issmelled

signalto brain

receptormolecules

cells of nasalpassage

signal molecules(aroma from bread)

bad fit,scent is notsmelled

Page 35: Fundamental Building Blocks: Chemistry, Water, and pH

Molecular Shape

PLAYPLAY Animation 2.3: Geometry, Chemistry, and Biology

Page 36: Fundamental Building Blocks: Chemistry, Water, and pH

2.4 Water and Life

Page 37: Fundamental Building Blocks: Chemistry, Water, and pH

Water and Life

• Water has several qualities that have strongly affected life on Earth.

Page 38: Fundamental Building Blocks: Chemistry, Water, and pH

Water is a Major Player in Many of Life’s Processes

• A solution is a homogeneous mixture of two or more kinds of molecules, atoms, or ions.

• The compound dissolved in solution is the solute; the compound doing the dissolving is the solvent.

Page 39: Fundamental Building Blocks: Chemistry, Water, and pH

Water is a Major Player in Many of Life’s Processes

Figure 2.15

water(solvent)

sodiumchloride(solute)

Sodium andchloride ionsdissolvedin water

Sodium chloride’spositively chargedsodium ions (Na+) areattracted to water’snegatively chargedoxygen atoms, whileits negatively chargedchloride ions (Cl–) areattracted to water’spositively chargedhydrogen atoms.

Pulled from the crystal,and separated fromeach other by thisattraction, sodium andchloride ions becomesurrounded by watermolecules.

This process ofseparating sodium andchloride ions repeatsuntil both ions areevenly dispersed,making this an aqueoussolution.

(a) Attraction (b) Separation (c) Dispersion

OH

H

Cl–Na+

Page 40: Fundamental Building Blocks: Chemistry, Water, and pH

Water is a Major Player in Many of Life’s Processes

• Water is a powerful solvent, with the ability to dissolve more compounds in greater amounts than any other liquid.

Page 41: Fundamental Building Blocks: Chemistry, Water, and pH

Water’s Structure Gives It Many Unusual Properties

• Because water’s solid form (ice) is less dense than its liquid form, bodies of water in colder climates do not freeze solid in winter.

• Allows life to flourish under the ice.

Page 42: Fundamental Building Blocks: Chemistry, Water, and pH

Water’s Structure Gives It Many Unusual Properties

Figure 2.16

ice

liquidwater

In ice, the maximum numberof hydrogen bonds form,causing the molecules to bespread far apart.

In liquid water, hydrogenbonds constantly break andre-form, enabling a moredense spacing than in ice.

Page 43: Fundamental Building Blocks: Chemistry, Water, and pH

Water’s Structure Gives It Many Unusual Properties

• Water has a great capacity to absorb and retain heat.

• Because of this, the oceans act as heat buffers for the Earth, thus stabilizing Earth’s temperature.

Page 44: Fundamental Building Blocks: Chemistry, Water, and pH

Water’s Structure Gives It Many Unusual Properties

• Water has a high degree of cohesion, which allows water to be drawn up through plants, via evaporation, in one continuous column, from roots through leaves.

Page 45: Fundamental Building Blocks: Chemistry, Water, and pH

Hydrophobic and Hydrophilic

• Some compounds do not interact with water.

• Hydrocarbons such as petroleum are examples of such hydrophobic compounds.

• Water cannot break down hydrophobic compounds, which is why oil and water don’t mix.

Page 46: Fundamental Building Blocks: Chemistry, Water, and pH

Hydrophobic and Hydrophilic

Figure 2.17

Page 47: Fundamental Building Blocks: Chemistry, Water, and pH

Hydrophobic and Hydrophilic

• Compounds that interact with water are polar or carry an electric charge and are called hydrophilic compounds.

Page 48: Fundamental Building Blocks: Chemistry, Water, and pH

2.5 Acids and Bases Are Important to Life

Page 49: Fundamental Building Blocks: Chemistry, Water, and pH

Acids and Bases Are Important to Life

• An acid is any substance that yields hydrogen ions when put in aqueous solution.

• A base is any substance that accepts hydrogen ions in solution.

Page 50: Fundamental Building Blocks: Chemistry, Water, and pH

Acids and Bases

• A base added to an acidic solution makes that solution less acidic.

• An acid added to a basic solution makes that solution less basic.

Page 51: Fundamental Building Blocks: Chemistry, Water, and pH

Acids and Bases

Figure 2.18

acid base

NaOHHCl

(H2O)

(a) Starting with pure water

(b) Making water more acidic

(c) Making water more basic

(d) Combining acidic and basic solutions

neutralizedsolution

Hydrochloric acid (HCl),poured into the water,dissociates intoH+ and Cl- ions.With a higherconcentration ofH+ ions in it, thewater movestowards theacidic end of thepH scale.

When the acid and base solutionsare poured together, the OH– ionsfrom (c) accept the H+ ions from(b), forming water and keepingthe solution at a neutral pH.

An equal concentration ofsodium hydroxide, poured into water,dissociates into Na+ and OH– ions,moving the water toward the basicend of the scale.

Pure water is a “neutral”substance in terms of itspH levels.

pure water

Page 52: Fundamental Building Blocks: Chemistry, Water, and pH

Acids and Bases

• The concentration of hydrogen ions that a given solution has determines how basic or acidic that solution is.

• The pH scale measures acidity. – This scale runs from 0 to 14, with 0 most

acidic,14 the most basic, and 7 neutral.

Page 53: Fundamental Building Blocks: Chemistry, Water, and pH

Acids and Bases

Figure 2.19

hydrochloric acid

lemon juice, gastric(stomach) juice

cola, beer, wine, vinegar

tomatoes

black coffee

urine

water

seawater

baking soda

Great Salt Lake

household ammonia

household bleach

oven cleaner

lye

battery acid

humanblood isslightlybasic

human blood

basic

acidic pH

H+ concentration(moles/liter)

neutral

Page 54: Fundamental Building Blocks: Chemistry, Water, and pH

Acids and Bases

• The pH scale is logarithmic. – A substance with a pH of 9 is 10 times as

basic as a substance with a pH of 8

Page 55: Fundamental Building Blocks: Chemistry, Water, and pH

Acids and Bases

• Living things function best in a near-neutral pH, although some systems in living things have different pH requirements.

Page 56: Fundamental Building Blocks: Chemistry, Water, and pH

Acids and Bases

PLAYPLAY Animation 2.4: Water and pH