Figure S4a(i) (ii)

0 10 20 30

amino acid and derivative metabolic processbiological_process

biosynthetic processcarbohydrate metabolic process

catabolic processcell communication

cellular component organization and biogenesiscellular process

generation of precursor metabolites and energylipid metabolic process

photosynthesisprotein metabolic process

protein modification processresponse to abiotic stimulus

response to biotic stimulusresponse to external stimulus

response to extracellular stimulusresponse to stress

secondary metabolic processsignal transduction

transcriptiontranslation

transportcell wall

cytoplasmcytosol

endoplasmic reticulumintracellularmembrane

mitochondrionnucleus

plasma membraneplastid

ribosomethylakoid

bindingcatalytic activity

DNA bindinghydrolase activity

kinase activitymolecular_functionnucleic acid bindingnucleotide binding

protein bindingRNA binding

structural molecule activitytranscription factor activity

transferase activitytransporter activity

Figure S4b(i) (ii)

0 5 10 15

amino acid and derivative metabolic processbiological_process

biosynthetic processcarbohydrate metabolic process

catabolic processcellular component organization and biogenesis

cellular processflower development

lipid metabolic processmetabolic process

nucleobase, nucleoside, nucleotide and nucleic acid metabolic processphotosynthesis

response to abiotic stimulusresponse to biotic stimulus

response to endogenous stimulusresponse to external stimulus

response to stresssecondary metabolic process

signal transductiontranscription

translationtransport

cell wallcytoplasm

cytosolendoplasmic reticulum

intracellularmembrane

mitochondrionnucleolus

nucleusperoxisome

plastidribosomethylakoid

bindingcatalytic activity

DNA bindinghydrolase activity

molecular_functionnucleic acid bindingnucleotide binding

structural molecule activitytranscription factor activity

transcription regulator activitytransferase activity

translation factor activity, nucleic acid bindingtransporter activity

Figure S4c(i) (ii)

0 5 10 15

amino acid and derivative metabolic processbiological_process

carbohydrate metabolic processcatabolic process

cellular component organization and biogenesiscellular process

generation of precursor metabolites and energynucleobase, nucleoside, nucleotide and nucleic acid metabolic process

photosynthesisprotein metabolic process

response to abiotic stimulusresponse to biotic stimulus

response to endogenous stimulusresponse to external stimulus

response to stresssignal transduction

transcriptiontranslation

transportcell wall

cytoplasmcytoskeleton

endoplasmic reticulumintracellularmembrane

mitochondrionnucleusplastid

ribosomethylakoid

bindingcatalytic activity

DNA bindinghydrolase activity

lipid bindingmolecular_functionnucleic acid bindingnucleotide binding

RNA bindingstructural molecule activitytranscription factor activity

transferase activity

Figure S4d(i) (ii)

0 10 20 30

amino acid and derivative metabolic processbiological_process

biosynthetic processcarbohydrate metabolic process

catabolic processcell communication

cellular component organization and biogenesiscellular process

generation of precursor metabolites and energylipid metabolic process

metabolic processphotosynthesis

protein metabolic processprotein modification processresponse to abiotic stimulus

response to biotic stimulusresponse to endogenous stimulus

response to external stimulusresponse to extracellular stimulus

response to stresssecondary metabolic process

signal transductiontranscription

translationtransport

cell wallendoplasmic reticulum

extracellular regionintracellularmembrane

mitochondrionnucleus

plasma membraneplastid

ribosomethylakoid

bindingcatalytic activity

DNA bindinghydrolase activity

kinase activitymolecular_functionnucleic acid bindingnucleotide binding

protein bindingRNA binding

signal transducer activitystructural molecule activitytranscription factor activity

transcription regulator activitytransferase activity

translation factor activity, nucleic acid bindingtransporter activity

Figure S4e(i) (ii)

0 5 10

biological_processbiosynthetic process

cellular component organization and biogenesiscellular process

lipid metabolic processmetabolic process

protein metabolic processprotein modification processresponse to abiotic stimulus

response to biotic stimulusresponse to endogenous stimulus

response to external stimulusresponse to stress

signal transductiontranscription

transportcell wall

cytoplasmendoplasmic reticulum

membranemitochondrion

nucleolusnucleus

peroxisomeplasma membrane

plastidthylakoid

bindingcarbohydrate binding

catalytic activityDNA binding

hydrolase activitykinase activity

lipid bindingmolecular_functionnucleic acid bindingnucleotide binding

oxygen bindingRNA binding

signal transducer activitystructural molecule activitytranscription factor activity

transferase activitytranslation factor activity, nucleic acid binding

transporter activity