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Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生生生生生生 2011 生 生生 5111619036 生生 5110809018 2014.10.27

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Page 1: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV

Inhibitor 生物信息学系 2011 级

李翔 5111619036

曹玮 5110809018

2014.10.27

Page 2: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Index

1• Background

2• Introduction

3

• Material Preparation

4• Research Process

5• Future Work

Page 3: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Index

1• Background

2• Introduction

3

• Material Preparation

4• Research Process

5• Future Work

Page 4: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Background

The role of DPP-IV inhibitor played on the fight against diabetes

Page 5: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Index

1• Background

2• Introduction

3

• Material Preparation

4• Research Process

5• Future Work

Page 6: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Index

1• Background

2• Introduction

3

• Material Preparation

4• Research Process

5• Future Work

Page 7: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Introduction

The aim of our work is to evaluate the effect of the aminomethylpyrimidine ring in the DPP-IV inhibitor

Through modification, we create several new candidates with similar structure

Use CADD to figure out the difference between the new candidates and the drugs offered in the literature

Page 8: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Index

1• Background

2• Introduction

3

• Material Preparation

4• Research Process

5• Future Work

Page 9: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Index

1• Background

2• Introduction

3

• Material Preparation

4• Research Process

5• Future Work

Page 10: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Materials

a complex X-ray

structure solved

was selected

(PDB code 1RWQ)

Page 11: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Materials

Four DPP-IV inhibitors and their variants

Page 12: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Index

1• Background

2• Introduction

3

• Material Preparation

4• Research Process

5• Future Work

Page 13: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Index

1• Background

2• Introduction

3• Material Preparation

4• Research Process

5• Future Work

Page 14: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Methods of modification

The methods of modification in the ring is originated from this literature.

Page 15: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Methods of screening

QSARMOE

DockingAutodock

Molecular dynamicsGromacs/Amber

Page 16: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

What we have done

The Structure of

DPP-IV has been

separated from

1RWQ

Page 17: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Index

1• Background

2• Introduction

3

• Material Preparation

4• Research Process

5• Future Work

Page 18: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Index

1• Background

2• Introduction

3• Material Preparation

4• Research Process

5• Future Work

Page 19: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Future Work

Design compounds on the basis of given four inhibitor structures

Compare the MD/QSAR results and draw a conclusion

Page 20: Evaluation on The Effect of The Aminomethylpyrimidine Ring of DPP-IV Inhibitor 生物信息学系 2011 级 李翔 5111619036 曹玮 5110809018 2014.10.27

Q & A