doc 1 - nsw department of industry › __data › assets › pdf_file › ... · 2017-08-10 · doc...
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Table 3 Personal Info
Table 3 Personal Info
Table 3 Personal Info Table 3 Personal Info
Table 3 Personal Info
Table 3 Personal Info
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Table 3 Personal InfoTable 3 Personal Info
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Table 3 Personal Info
5310 5320 5330 5340 5350 5360 5370 5380 5390 5400 ....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
JK_RHDV_1_1 AGCGCCGCAAGGCGAAGCAGCGGGCACTGCCACCACAGCATCAGTTCCCGGAACCACGACTGATGGCATGGATCCTGGCGTTGTGGCCACTACCAGCGTG unpublished TUR 09 -------------------------------------------------------------------------------------------------... unpublished ESP 09 contig sequ -------------------------------------------------------------------------------------------------... unpublished K5 2815/10-2 new c -------------------------------------------------------------------------------------------------... M141 sequence ---------------------------------------------------------------------------------------------------- M142 sequence -------------------------------------------------------------------------------------------------...
5410 5420 5430 5440 5450 5460 5470 5480 5490 5500 ....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
JK_RHDV_1_1 ATCACTGCAGAAAATTCATCTGCATCGATTGCAACAGCAGGGATTGGCGGACCACCCCAACAGGTGGACCAACAAGAGACATGGAGAACAAATTTTTATT unpublished TUR 09 G..............................T....................................T..G.....A...................... unpublished ESP 09 contig sequ G..........G.......................G........................................................C....... unpublished K5 2815/10-2 new c G...................C......G..........G........T..C..........................A........G..C........C. M141 sequence ---------------------------------------------------------------------------------------------------- M142 sequence G...................C......G.......G..G...........C.......................G..A........G.....C.....C.
5510 5520 5530 5540 5550 5560 5570 5580 5590 5600 ....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
JK_RHDV_1_1 ACAATGATGTTTTCACTTGGTCAGTCGCGGACGCCCCTGGCAGCATACTTTACACCGTCCAACATTCTCCACAAAAAAACCCATTCACAGCCGTGCTGAG unpublished TUR 09 .............T..................................................C...........C..............T........ unpublished ESP 09 contig sequ .T...............................................C.....T..T........C.....G..C....................A.. unpublished K5 2815/10-2 new c .......C..............C........T..G..C........T..C.....T........C........G..C..T...............T.... M141 sequence ---------------------------------------------------------------------------------------------------- M142 sequence ......................T........T..A..C.....T..T.....T..T........C........G..C...........G..T........
5610 5620 5630 5640 5650 5660 5670 5680 5690 5700 ....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
JK_RHDV_1_1 CCAGATGTACGCTGGCTGGGCTGGTGGCATGCAGTTTCGCTTCATAGTTGCCGGGTCAGGTGTGTTTGGTGGGCGACTGGTCGCGGCTGTGATACCACCA unpublished TUR 09 .........T.....T.................................................................................... unpublished ESP 09 contig sequ .........T............................................A..G..C..............GT....T.....C...........G unpublished K5 2815/10-2 new c ....................................C..A...........T..A............................................. M141 sequence -------------------------------------------------------------------------------....................G M142 sequence ....................................C..............T..A............................................G
5710 5720 5730 5740 5750 5760 5770 5780 5790 5800 ....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
JK_RHDV_1_1 GGCATCGAGATTGGACCAGGGTTGGAGGTCAGGCAGTTTCCTCATGTTGTCATCGATGCCCGTTCACTCGAACCTGTTACCATCACCATGCCAGACTTGC unpublished TUR 09 .............................T.......................A..C...........T...........T................... unpublished ESP 09 contig sequ .....T...............C.............A..C..C...........T..C..T........T..G............................ unpublished K5 2815/10-2 new c ...................................A........C...........C........................................... M141 sequence .....................C.............A.....C........T.....C........G.....G.....C..T................... M142 sequence .....................C.............A.....C........T.....C........G.....G.....C..T...................
5810 5820 5830 5840 5850 5860 5870 5880 5890 5900 ....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
JK_RHDV_1_1 GTCCCAACATGTACCATCCAACTGGTGACCCTGGCCTTGTTCCCACACTAGTCCTTAGTGTTTACAACAACCTTATCAACCCGTTTGGTGGGTCCACTAG unpublished TUR 09 .......................................................C........T..........................A.....C.. unpublished ESP 09 contig sequ .C..T...........C..G.....C.......................G.......................C.................A..T..C.. unpublished K5 2815/10-2 new c .C......................................C................................C.........................A M141 sequence ................C.......................C........G.......................C.......................C.A M142 sequence ................C.......................C........G.......................C.......................C.A
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5910 5920 5930 5940 5950 5960 5970 5980 5990 6000 ....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
JK_RHDV_1_1 TGCAATCCAGGTGACAGTGGAAACAAGGCCAAGTGAAGACTTTGAGTTCGTGATGATTCGAGCCCCCTCCAGCAAGACTGTTGACTCAATTTCGCCCGCA unpublished TUR 09 ..................A..............C..............T................................................... unpublished ESP 09 contig sequ C......................................T......................................C........G..C..A...... unpublished K5 2815/10-2 new c C...........A..............A........T...........T.........A.............................G.C..A..T... M141 sequence C........A..A.......................T...........T.........A.G..A.....T........C...........C..A..T... M142 sequence C........A..A.......................T...........T.........A.G..A.....T........C...........C..A..T...
6010 6020 6030 6040 6050 6060 6070 6080 6090 6100 ....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
JK_RHDV_1_1 GGCCTCCTCACGACCCCAGATCTTACTGGGGTTGGCAATGACAACAGGTGGAACGGCCAAATAGTGGGACTGCAACCAGTACCCGGAGGGTTTTCTACGT unpublished TUR 09 ..T...A............TC..A........................................................G................... unpublished ESP 09 contig sequ ..T..T.............T...CG......................A.....T..T...........G...........T..T..G.....C..C.... unpublished K5 2815/10-2 new c ...................TC........T.....................................................T..G........C.... M141 sequence ..T................TC..C.....T.....................................................T..G........C.... M142 sequence ..T................TC..C.....T.....................................................T..G........C....
6110 6120 6130 6140 6150 6160 6170 6180 6190 6200 ....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
JK_RHDV_1_1 GCAACAGGCATTGGAACTTGAATGGCAGCACATATGGCTGGTCAAGCCCTCGGTTTGCCGACATTGACCACCGAAAAGGCAGTGCAAGTTACACTGGGAG unpublished TUR 09 ............................T..........................................A....................C......A unpublished ESP 09 contig sequ .................................................C........T...........T.A.........C.........T....... unpublished K5 2815/10-2 new c ...................A..C..........................C........T...........T....G...............TT......A M141 sequence .......A..C...........C..............T.....................................GT.............TTG......A M142 sequence .......A..C...........C..............T.....................................GT.............TTG......A
6210 6220 6230 6240 6250 6260 6270 6280 6290 6300 ....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
JK_RHDV_1_1 CAACGCAACCAACGTGCTTCAGTTTTGGTATGCCAATGCTGGGTCTGCAATCGACAACCCCATTTCCCAGGTTGCACCAGACGGCTTTCCTGACATGTCG unpublished TUR 09 ......C.....T.....C...........C.................G.................A..............T.................. unpublished ESP 09 contig sequ T............................................................G.C..A................................. unpublished K5 2815/10-2 new c ....T.C.....T.....C...........C....................T........T..........................C...........A M141 sequence ....T.C...........C...........C..T........A......G.T........T..C..............G....................A M142 sequence ....T.C...........C...........C..T........A......G.T........T..C..............G....................A
6310 6320 6330 6340 6350 6360 6370 6380 6390 6400 ....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
JK_RHDV_1_1 TTCGTGCCCTTTAACGGCCCCGGCATTCCAGCTGCGGGGTGGGTCGGATTTGGTGCAATCTGGAACAGTAACAGCGGTGCCCCCAACGTTACGACTGTGC unpublished TUR 09 ................................C................................................................... unpublished ESP 09 contig sequ ....................T...........C..A........T........C..........TT..C......A....T................... unpublished K5 2815/10-2 new c ...............A.....A....C..GA................G.......GT..T........C....A..........GCT.C.........A. M141 sequence ........T......A.....AA...C..GA.C......................GT..T........................GCT.C........... M142 sequence ........T......A.....AA...C..GA.C......................GT..T........................GCT.C...........
6410 6420 6430 6440 6450 6460 6470 6480 6490 6500 ....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
JK_RHDV_1_1 AGGCCTATGAGTTAGGTTTTGCCACTGGGGCACCAGGCAACCTCCAGCCCACCACCAACACTTCAGGTGCACAGACTGTCGCCAAGTCCATTTATGCCGT unpublished TUR 09 .......C........C.....T..............T.........................................A..T................. unpublished ESP 09 contig sequ ....T........G.....C.................T....C.........................T......T...............A........ unpublished K5 2815/10-2 new c ....T...........C..................AA.........................................................C..... M141 sequence ....T........G..C..................AA............T.......................A........T................. M142 sequence ....T........G..C..................AA............T.......................A........T.................
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6510 6520 6530 6540 6550 6560 6570 6580 6590 6600 ....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
JK_RHDV_1_1 AGTGACTGGCACAGCCCAAAACCCAGCCGGATTGTTTGTGATGGCCTCGGGTATTATCTCCACCCCAAATGCCAGCGCCATCACATACACGCCTCAACCA unpublished TUR 09 .............AAT..............G...........................................A...............A..C...... unpublished ESP 09 contig sequ G...T.......GA..........C......C....................G...............G.....A...T..............C...... unpublished K5 2815/10-2 new c G.....C......AA.....G....A.....C....................G................C....AT...G.................... M141 sequence G..A..C......AA.....G....A.....C....................G................C....AT..TG.............C...... M142 sequence G..A..C......AA.....G....A.....C....................G................C....A...TG.............C......
6610 6620 6630 6640 6650 6660 6670 6680 6690 6700 ....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
JK_RHDV_1_1 GACAGAATTGTAACCACACCCGGCACTCCTGCCGCTGCACCTGTGGGTAAGAACACACCCATCATGTTCGCGTCTGTCGTCAGGCGCACCGGTGACGTCA unpublished TUR 09 .....G.........................................C......................................T............. unpublished ESP 09 contig sequ ...........G..............C................................................A.T...................... unpublished K5 2815/10-2 new c ...........G..T....................C.........................................T...................... M141 sequence ...........G..T..............C.....C...........C........G..............A.....T...................... M142 sequence ...........G..T..............C.....C...........C........G..............A.....T......................
6710 6720 6730 6740 6750 6760 6770 6780 6790 6800 ....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
JK_RHDV_1_1 ACGCCACAGCTGGATCAGTCAACGGGACCCAGTACGGCACAGGCTCCCAACCACTGCCAGTGACAATTGGACTTTCGCTCAACAACTACTCGTCAGCACT unpublished TUR 09 .................AC..................................T.......A........G.....A....................... unpublished ESP 09 contig sequ .....T.......G....CT.....A....................T..............A...........C.....T.................... unpublished K5 2815/10-2 new c .....G.......G...AC..............................G...........A...........C.......................... M141 sequence .....G.......G...AC..........................................A.....C................................ M142 sequence .....G.......G...AC..........................................A.....C................................
6810 6820 6830 6840 6850 6860 6870 6880 6890 6900 ....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
JK_RHDV_1_1 TATGCCCGGACAGTTTTTCGTTTGGCAGTTAACCTTTGCATCTGGTTTCATGGAGATAGGTTTAAGTGTGGACGGGTATTTTTATGCAGGAACAGGGGCC unpublished TUR 09 ..............................G.............................C....................................... unpublished ESP 09 contig sequ .............................................C...........T..CC.G.....C........C........T..G.....A... unpublished K5 2815/10-2 new c C........G...............................................T....................C.................AA.. M141 sequence C........G...............................................C..C...................................A... M142 sequence C........G...............................................C..C...................................A...
6910 6920 6930 6940 6950 6960 6970 6980 6990 7000 ....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
JK_RHDV_1_1 TCAACCACACTCATTGACCTGACTGAACTCATTGACGTACGCCCTGTGGGACCCAGGCCGTCCAAAAGCACACTCGTGTTCAACCTGGGGGGCACAGCCA unpublished TUR 09 ..............C.........................................................---------------------------- unpublished ESP 09 contig sequ ..................T...................T.....C..............A.....G......---------------------------- unpublished K5 2815/10-2 new c ........G...................................C....................G......---------------------------- M141 sequence ........G...........A.................G.....C..............A..T..G......---------------------------- M142 sequence ........G...........A.................G.....C..............A..T..G......----------------------------
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RHDV-V351
JK RHDV 1 1 Czech strain inoculumgi|156633316|gb|EF558580.1| Rabbit hemorrhagic disease virus strain NZ61, complete genome
gi|156633313|gb|EF558579.1| Rabbit hemorrhagic disease virus strain NZ54, complete genome
gi|9790292|ref|NC 001543.1| Rabbit hemorrhagic disease virus-FRG, complete genome
gi|333765|gb|M67473.1|RHVCG Rabbit hemorrhagic disease virus-FRG, complete genome
gi|157429094|gb|EU003579.1| Rabbit hemorrhagic disease virus isolate Italy-90, complete genome
unpublished TURretfield 09gi|157429097|gb|EU003580.1| Rabbit hemorrhagic disease virus isolate Korea-90
gi|10304400|gb|AF295785.1| Rabbit hemorrhagic disease virus Mexico89
gi|156633331|gb|EF558585.1| Rabbit hemorrhagic disease virus strain Hagenow
gi|160624909|gb|EF558576.1| Rabbit hemorrhagic disease virus strain Jena, complete genome
gi|77997408|gb|DQ189077.1| Rabbit hemorrhagic disease virus from Bahrain, complete genome
gi|125381285|gb|EF363035.1| Rabbit hemorrhagic disease virus clone pJG-RHDV-DD06, complete genome
gi|160624911|gb|EF558577.1| Rabbit hemorrhagic disease virus strain Meiningen, complete genome
gi|156633303|gb|EF558575.1| Rabbit hemorrhagic disease virus strain Ascot, complete genome
gi|854640|emb|X87607.1| RHDV-BS89 complete genome
gi|156633300|gb|EF558574.1| Rabbit hemorrhagic disease virus strain Wika, complete genome
gi|156633297|gb|EF558573.1| Rabbit hemorrhagic disease virus strain Frankfurt5, complete genome
gi|156633294|gb|EF558572.1| Rabbit hemorrhagic disease virus strain Frankfurt12, complete genome
gi|156633310|gb|EF558578.1| Rabbit hemorrhagic disease virus strain Eisenhuttenstadt, complete genome
gi|736282|emb|Z29514.1| RHDV-SD complete genome
gi|426273153|gb|JX886002.1| Rabbit hemorrhagic disease virus isolate CB137 Pt, complete genome
gi|426273150|gb|JX886001.1| Rabbit hemorrhagic disease virus isolate CB194 Pt, complete genome
unpublished ESP 09 contig sequencegi|156633334|gb|EF558586.1| Rabbit hemorrhagic disease virus strain Hartmannsdorf, complete genome
gi|157429103|gb|EU003582.1| Rabbit hemorrhagic disease virus isolate UT-01, complete genome
gi|156633328|gb|EF558584.1| Rabbit hemorrhagic disease virus strain Rossi, complete genome
gi|156633325|gb|EF558583.1| Rabbit hemorrhagic disease virus strain Triptis, complete genome
M141 sequence Mysterious isolateM142 sequence Mysterious isolate
gi|157429100|gb|EU003581.1| Rabbit hemorrhagic disease virus isolate NY-01, complete genome
gi|178469771|dbj|AB300693.2| Rabbit hemorrhagic disease virus genomic RNA, complete genome
gi|178469771|dbj|AB300693.2| Rabbit hemorrhagic disease virus genomic RNA, complete genome
gi|76574164|gb|DQ205345.1| Rabbit hemorrhagic disease virus strain JX/CHA/97
unpublished K5 2815/10-2 new contiggi|156633322|gb|EF558582.1| Rabbit hemorrhagic disease virus strain Dachswald, complete genome
gi|9838503|gb|AF258618.2| Rabbit hemorrhagic disease virus isolate Iowa2000, complete genome
gi|328670856|gb|JF412629.1| Rabbit hemorrhagic disease virus isolate HYD, complete genome
gi|156633319|gb|EF558581.1| Rabbit hemorrhagic disease virus strain Erfurt, complete genome
gi|311088582|gb|HM623309.1| Rabbit hemorrhagic disease virus isolate NJ-2009, complete genome
gi|82659685|gb|DQ280493.1| Rabbit hemorrhagic disease virus, complete genome
gi|157429091|gb|EU003578.1| Rabbit hemorrhagic disease virus isolate IN-05, complete genome
gi|42406075|gb|AY523410.1| Rabbit hemorrhagic disease virus isolate CD/China, complete genome
Michigan Calicivirus MRCV
RCV-A1
gi|11462417|ref|NC 002615.1| European brown hare syndrome virus, complete genome
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7
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23
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90
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64
33
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0.05
RHDV prototype
RHDVa
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