distributed biodiversity information databases
DESCRIPTION
Distributed Biodiversity Information Databases. A. Townsend Peterson. Paris Museum. British Museum. Field Museum. KU Museum. “World Museum”. Fish University of Florida. Fish Tulane University. Fish University of Michigan. Fish “World Museum ”. Making Simple Databases BETTER. - PowerPoint PPT PresentationTRANSCRIPT
![Page 1: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/1.jpg)
Distributed Biodiversity Distributed Biodiversity Information DatabasesInformation Databases
A. Townsend PetersonA. Townsend Peterson
![Page 2: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/2.jpg)
Paris MuseumParis Museum
![Page 3: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/3.jpg)
British MuseumBritish Museum
![Page 4: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/4.jpg)
Field MuseumField Museum
![Page 5: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/5.jpg)
KU MuseumKU Museum
![Page 6: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/6.jpg)
““World Museum”World Museum”
![Page 7: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/7.jpg)
FishUniversity of Florida
![Page 8: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/8.jpg)
FishTulane University
![Page 9: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/9.jpg)
FishUniversity of Michigan
![Page 10: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/10.jpg)
Fish“World Museum”
![Page 11: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/11.jpg)
Making Simple Databases BETTERMaking Simple Databases BETTER
GeoreferencingGeoreferencing
Standardization of taxonomyStandardization of taxonomy
Error-detection and cleaningError-detection and cleaning
Integration with the ‘World Museum’Integration with the ‘World Museum’
![Page 12: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/12.jpg)
Data Sharing - Issues of Data Sharing - Issues of ImportanceImportance
SecuritySecurity
OwnershipOwnership
ControlControl
Updates of informationUpdates of information
Funding and chargingFunding and charging
![Page 13: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/13.jpg)
Safeguards ISafeguards I
Legal disclaimer:Legal disclaimer:– No for-profit uses without permission of data No for-profit uses without permission of data
owners (curators)owners (curators)– No repackaging and redistribution without No repackaging and redistribution without
permission of data owners (curators)permission of data owners (curators)– Data owners not responsible for data quality Data owners not responsible for data quality
or accuracyor accuracy– Negative data do not apply – absence of Negative data do not apply – absence of
records is not indicative of absence of records is not indicative of absence of species, etc.species, etc.
![Page 14: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/14.jpg)
Safeguards IISafeguards IIData remain at the owner institution – no Data remain at the owner institution – no centralization involvedcentralization involvedNo hacking – data are isolated from the No hacking – data are isolated from the original/master datasetoriginal/master datasetInstitutions may restrict access to classes of data, Institutions may restrict access to classes of data, e.g.,e.g.,– Data from particular regions or taxa not servedData from particular regions or taxa not served– Particular fields for sensitive species not servedParticular fields for sensitive species not served– Data for particular collectors or time periods not Data for particular collectors or time periods not
servedserved– Etc.Etc.
![Page 15: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/15.jpg)
AdvantagesAdvantages
Data ownership retained by institution that holds Data ownership retained by institution that holds primary voucher specimenprimary voucher specimenData are updated as often as wished … daily, if Data are updated as often as wished … daily, if preferred by owner institutionpreferred by owner institutionData quality improves over timeData quality improves over timeDetailed reporting of use of collections data to Detailed reporting of use of collections data to data owners (soon!)data owners (soon!)Free and open access to users worldwideFree and open access to users worldwideCommunity cooperation opens many doorsCommunity cooperation opens many doors
![Page 16: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/16.jpg)
Construction of the NABIN NetworkConstruction of the NABIN Network
Data Sets in the NABIN Network
0
2
4
6
8
10
12
14
16
Jun-97 Sep-97 Jan-98 Apr-98 Jul-98 Nov-98
Date
Nu
mb
er
of
da
ta s
ets
![Page 17: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/17.jpg)
Construction of the NABIN NetworkConstruction of the NABIN Network
Data Points in the NABIN Network0
200000
400000
600000
800000
1000000
1200000
1400000
Jun-97 Sep-97 Jan-98 Apr-98 Jul-98 Nov-98
Date
![Page 18: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/18.jpg)
TSA Use ITSA Use I
Monthly Use of TSA
0
10000
20000
30000
40000
50000
60000
70000
Feb-99 May-99 Aug-99 Dec-99 Mar-00 Jun-00 Oct-00 Jan-01 Apr-01 Jul-01 Nov-01
Date
Nu
mb
er o
f h
its
![Page 19: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/19.jpg)
Evolution of TechnologyEvolution of Technology
Dublin Core/Darwin CoreDublin Core/Darwin Core
Z39.50Z39.50
DiGIRDiGIR
TAPIRTAPIR
![Page 20: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/20.jpg)
DiGIRDiGIR
Distributed Generic Distributed Generic Information Information Retrieval Retrieval
http://http://digir.sourceforge.netdigir.sourceforge.net//
![Page 21: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/21.jpg)
Distributed Biodiversity Information NetworksDistributed Biodiversity Information Networks
REMIB http://www.conabio.gob.mx/REMIB http://www.conabio.gob.mx/SpeciesLink http://splink.cria.org.br/SpeciesLink http://splink.cria.org.br/MaNIS http://elib.cs.berkeley.edu/manis/ MaNIS http://elib.cs.berkeley.edu/manis/ HerpNET http://www.herpnet.org/ HerpNET http://www.herpnet.org/ ORNIS http://ornisnet.org/ ORNIS http://ornisnet.org/ AVH http://www.chah.gov.au/avh/ AVH http://www.chah.gov.au/avh/ GBIF http://www.gbif.net/ GBIF http://www.gbif.net/ ATREE http://www.ecoinfoindia.org ATREE http://www.ecoinfoindia.org
![Page 22: Distributed Biodiversity Information Databases](https://reader036.vdocuments.mx/reader036/viewer/2022062520/56815cca550346895dcad41e/html5/thumbnails/22.jpg)
Primary Species’ Occurrence Data
Recordings, images, videos
Field notes, otherancillary information
Stomach contents, etc.
Scientific literature
Geospatial datadescribing locality
Parasites etc.
Stable isotope data
Gene sequence data
Remote-sensingdata showing
locality in space and time
☺
☺
☺☺
Taxonomic data