developing science gateways and data repositories – the ... · the sci-gaia training workshops...

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This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement n° 654237 Developing Science Gateways and Data Repositories – The Sci-GaIA Training Workshops Roberto Barbera – University of Catania - Italy ([email protected] ) 15 March 2016 – Sci-GaIA Workshop on Promoting Open Science in Africa – Dakar (Senegal)

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Page 1: Developing Science Gateways and Data Repositories – The ... · The Sci-GaIA Training Workshops Roberto Barbera – University of Catania - Italy (roberto.barbera@ct.infn.it) 15

This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement n° 654237

Developing Science Gateways and Data Repositories – The Sci-GaIA Training Workshops

Roberto Barbera – University of Catania - Italy ([email protected]) 15 March 2016 – Sci-GaIA Workshop on Promoting Open Science in Africa – Dakar (Senegal)

Page 2: Developing Science Gateways and Data Repositories – The ... · The Sci-GaIA Training Workshops Roberto Barbera – University of Catania - Italy (roberto.barbera@ct.infn.it) 15

Outline

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•  Introductory concepts, definitions and driving considerations

•  The Sci-GaIA Winter School

•  The Sci-GaIA Summer School •  Summary and conclusions

Page 3: Developing Science Gateways and Data Repositories – The ... · The Sci-GaIA Training Workshops Roberto Barbera – University of Catania - Italy (roberto.barbera@ct.infn.it) 15

The Sci-GaIA project objectives (http://www.sci-gaia.eu/about-sci-gaia/project-objectives/)

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Page 4: Developing Science Gateways and Data Repositories – The ... · The Sci-GaIA Training Workshops Roberto Barbera – University of Catania - Italy (roberto.barbera@ct.infn.it) 15

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The Sci-GaIA Federated Platform for an Open Science Commons in Africa

www.sci-gaia.eu/osp/

Page 5: Developing Science Gateways and Data Repositories – The ... · The Sci-GaIA Training Workshops Roberto Barbera – University of Catania - Italy (roberto.barbera@ct.infn.it) 15

The Triangle of Knowledge

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Research & Development

Innovation Education & Training

Building e-Infrastructures is a waste if we don’t “build”, at the same time, their users

Along with e-Infrastructures, t-Infrastructures and training programmes are thus needed as well as Open Education Resources (OER)

t-Infrastructure

Page 6: Developing Science Gateways and Data Repositories – The ... · The Sci-GaIA Training Workshops Roberto Barbera – University of Catania - Italy (roberto.barbera@ct.infn.it) 15

Sci-GaIA Educational Modules

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A&A ROC

courses.sci-gaia.eu www.sci-gaia.eu

Catania SG Framework

Other OER’s

To be adopted in university curricula in EU and Africa

Page 7: Developing Science Gateways and Data Repositories – The ... · The Sci-GaIA Training Workshops Roberto Barbera – University of Catania - Italy (roberto.barbera@ct.infn.it) 15

Sci-GaIA Online Courses (http://courses.sci-gaia.eu)

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Everybody is welcome to contribute with full

courses and other training & education materials

Page 8: Developing Science Gateways and Data Repositories – The ... · The Sci-GaIA Training Workshops Roberto Barbera – University of Catania - Italy (roberto.barbera@ct.infn.it) 15

Sci-GaIA Online Courses: an example (Will be officially open online by end of March)

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Incollabora*onwith

Page 9: Developing Science Gateways and Data Repositories – The ... · The Sci-GaIA Training Workshops Roberto Barbera – University of Catania - Italy (roberto.barbera@ct.infn.it) 15

The Sci-GaIA Winter School (http://www.sci-gaia.eu/winter-school)

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Page 10: Developing Science Gateways and Data Repositories – The ... · The Sci-GaIA Training Workshops Roberto Barbera – University of Catania - Italy (roberto.barbera@ct.infn.it) 15

The Sci-GaIA Winter School (overview) (http://www.sci-gaia.eu/winter-school)

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•  The goal of the Sci-GaIA Winter School is to create the skills to integrate scientific applications in the Africa Grid Science Gateway and/or in or in other domain-specific Science Gateways

•  This will allow the creation of an intercontinental pool of experts that can act as “interface” between the end-users of the Communities of Practice (CoPs) supported by the project and the e-Infrastructure services

•  The school will be entirely web-based and it will include a combination of pre-recorded lectures and interactive sessions per week where to check the progress of students through their short presentations and the correction of the exercises

•  The school will follow a project-driven education approach with teams of students working on the development of scientific applications to be integrated in the Science Gateway(s)

•  At the end of the school, a panel of experts will assess the progress made by the various teams of students and the winner and the runner-up application teams (max 2 persons per team) will win a free participation to the Sci-GaIA Final Conference that will be held in Brussels in March/April 2017

Page 11: Developing Science Gateways and Data Repositories – The ... · The Sci-GaIA Training Workshops Roberto Barbera – University of Catania - Italy (roberto.barbera@ct.infn.it) 15

The Sci-GaIA Winter School (flyer) (https://oar.sci-gaia.eu/record/87)

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Page 12: Developing Science Gateways and Data Repositories – The ... · The Sci-GaIA Training Workshops Roberto Barbera – University of Catania - Italy (roberto.barbera@ct.infn.it) 15

The Sci-GaIA Winter School (requirements and criteria)

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•  Required skills •  Java programming •  Web application development (HTML, Java server pages, XML, Application

Server, servlets) •  Basic Unix shell (VPN, SSH, bash scripting) •  Basic Database management (e.g., MySQL)

•  Selection criteria •  Relevance of applicants’ CVs to the topics of the Winter School •  Composition and geographic distribution of the applicants’ team •  Presence of a proposed scientific application. If a scientific application is

proposed, additional criteria will be: •  Relevance of the proposed scientific application, in terms of its impact

and size of the user base •  Multi-/inter-disciplinarity of the proposed scientific application •  Societal challenges addressed by the proposed scientific application •  Use of modern paradigms in the proposed scientific application (e.g.,

Distributed Computing, Big Data, Internet of Things, Open Data, etc.) •  Readiness status of the proposed scientific application

Page 13: Developing Science Gateways and Data Repositories – The ... · The Sci-GaIA Training Workshops Roberto Barbera – University of Catania - Italy (roberto.barbera@ct.infn.it) 15

The Sci-GaIA Winter School (http://www.sci-gaia.eu/winter-school)

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•  The goal of the Sci-GaIA Winter School is to create the skills to integrate scientific applications in the Africa Grid Science Gateway and/or in or in other domain-specific Science Gateways

•  This will allow the creation of an intercontinental pool of experts that can act as “interface” between the end-users of the Communities of Practice (CoPs) supported by the project and the e-Infrastructure services

•  The school will be entirely web-based and it will include a combination of pre-recorded lectures and interactive sessions per week where to check the progress of students through their short presentations and the correction of the exercises. Both the inaugural lecture and the final day’s presentations will also be held as interactive webinars

•  The school will follow a project-driven education approach with teams of students working on the development of scientific applications to be integrated in the Science Gateway(s)

•  At the end of the school, a panel of experts will assess the progress made by the various teams of students and the winner and the runner-up application teams (max 2 persons per team) will win a free participation to the Sci-GaIA Final Conference that will be held in Brussels in March/April 2017

Page 14: Developing Science Gateways and Data Repositories – The ... · The Sci-GaIA Training Workshops Roberto Barbera – University of Catania - Italy (roberto.barbera@ct.infn.it) 15

The Sci-GaIA Winter School (applications proposed)

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Team Members Country Applica:on Societalchallenge Notes

1 4 Senegal PALD-CSE (1)Foodsecurity,sustainableagricultureandforestry(2)Climateac*on,environment

Crea*onofanOpernAccessRepositoryfortheCentredeSuiviEcologique(CSE)

2 1 Tanzania WEKA

(1)Health,demographicchangeandwellbeing(2)Foodsecurity,sustainableagricultureandforestry,marineandmari*meandinlandwaterresearch,andtheBio-economy(3)Smart,greenandintegratedtransport(4)Climateac*on,environment,resourceefficiencyandrawmaterials(5)Europeinachangingworld-inclusive,innova*veandreflec*vesocie*es(6)Securesocie*es-protec*ngfreedomandsecurityofEuropeanditsci*zens

WaikatoEnvironmentforKnowledgeAnalysis(WEKA)isapopularsuiteofmachinelearningsoVware

3 4 Nigeria AP-SGW Health,demographicchangeandwellbeing

DesignanddevelopaprototypeAfricanPhytomedicineScienceGatewaytopromotecollabora*on,communi*esofprac*cefocusingonPhytomedicineforimprovinghealthcareinAfrica

4 4 Tanzania COPRA Diseases,Medicine,Knowledgeandskillsforcommunicable/non-communicablediseases

COPRAisanini*a*veaimedatensuringpeoplelivinginruralandremotepartsofthecountrytohaveaccesstoqualitycarethroughusageofICTtoolsandapplica*on.

5 1 Morocco WUF (1)Smart,greenandintegratedtransport(2)Secure,CleanandEfficientEnergy

WeatherofUrbanTraffic(WUF)willaimtheop*miza*onofroadtrafficinurbanareas.Throughpriorsta*s*canalyseofdifferentdatarelatedtotrafficflows,thisapplica*onwillofferusersanactualisedforecastoftrafficflows.Alsoupda*ngthereal-*meforecastswillenableuserstoop*mizetheirtripsandthusavoidtrafficjams.Ul*matelythisapplica*onwillbeofbenefitbothtotheop*miza*onoffuelconsump*onandtrafficflow.

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The Sci-GaIA Winter School (applications to be assigned)

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Team Members Country6 1 Tanzania 7 1 Central African Republic 8 1 Democratic Republic of Congo 9 1 Uganda

10 4 Nigeria

11 1 Malawi

If you’d like to propose applications relevant for your

Communities of Practice to be assigned at the school

contact us at [email protected]

by the 22nd of March

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Installing and configuring Open Access Repositories (1/2) (https://oar.sci-gaia.eu/record/20 - 11623/sci-gaia:1439992092.82)

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Installing and configuring Open Access Repositories (2/2) (Step by step documentation: http://oar-sci-gaia.readthedocs.org)

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Developing applications for Science Gateways (1/2) (http://sgw.africa-grid.org - http://www.sci-gaia.eu/applications)

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Developing applications for Science Gateways (2/2) (http://csgf.readthedocs.org)

Page 20: Developing Science Gateways and Data Repositories – The ... · The Sci-GaIA Training Workshops Roberto Barbera – University of Catania - Italy (roberto.barbera@ct.infn.it) 15

The Sci-GaIA Summer School (http://www.sci-gaia.eu/summer-school → will be online soon)

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•  Same format of the Winter School but … face to face in the same physical environment for 2 weeks

•  Grants will be provided to selected applicants

•  Provisional time: July 2016

•  Bookmark and stay tuned to •  www.sci-gaia.eu/summer-school

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Summary and conclusions

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•  Train and educate future generations of “open” scientists is of utmost importance

•  The Sci-GaIA consortium is very much committed to create e-Infrastructure and Open Science related materials and release them as Open Educational Resources

•  The Winter School and the Summer School will be important milestones in this path

by the 22nd of March

•  Some last-minute places for the Winter School are available for the participants to this workshop

•  Go to www.sci-gaia.eu/winter-school and fill the application form

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Thank you! sci-gaia.eu

[email protected]