computational infrastructure for nuclear astrophysics step-by ......2d animated nuclide chart of...

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computational infrastructure for nuclear astrophysics Michael Smith, Physics Division, Oak Ridge Na:onal Lab [email protected] step-by-step simulation instructions

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Page 1: computational infrastructure for nuclear astrophysics step-by ......2D animated nuclide chart of abundance vs. time animation screenshots we will render a movie of these plots to your

computational infrastructure for nuclear astrophysics

Michael  Smith,  Physics  Division,  Oak  Ridge  Na:onal  Lab   [email protected]

step-by-step simulation instructions

Page 2: computational infrastructure for nuclear astrophysics step-by ......2D animated nuclide chart of abundance vs. time animation screenshots we will render a movie of these plots to your

download the java application from nucastrodata.org

visit here

then click here

Page 3: computational infrastructure for nuclear astrophysics step-by ......2D animated nuclide chart of abundance vs. time animation screenshots we will render a movie of these plots to your

download the java application from nucastrodata.org

click here

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launch the platform-independent java application and log in

click here

you need an internet connection to run this suite

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login to the system – you need an internet connection

for your first login, use guest, then register

guests can use some functions

Registered Users can save their work in their own disk allocaiton

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go to Element Synthesis Simulations & Element Synthesis Simulator

first mouseover here

then finally click here

then click here

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starting up Element Synthesis Simulator

click here

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choose a simulation category

select model category here

supernova coming soon !

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choose a particular simulation

select here

click here

information on simulation is here

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here is the simulation list for X-ray bursts

select here

click here

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here is the simulation list for “Other” …

select here

click here

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choose a library of rates – default is JINA REACLIB v2.0

select here

click here

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choose a library of rates – you can choose your own library

select here

use a reference library or your own library of modified rates

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choose a set of nuclei to track

select here

click here to see nuclei

this set is cmopatible with J. Fisker’s XRB profiles in our system

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a list of tracked nuclei

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setting up the network

click here to set up network

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network is set up

check here

click here

this shows network is ready

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set up single- or multi-zone, view thermo history

some models have many zones

run zones one at a time OR have the system run them back to back

see the chosen profile (temperature vs. time, density vs. time)

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view chosen thermodynamic history for this post-processing calc

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setting up a sensitivity study

click here

select here for sensitivity study

sensitivity studies vary one rate by a set of factors you supply and automatically run a series of simulations with those different rates, leaving all other rates unchanged

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setting up a sensitivity study

choose a reaction to vary

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choose reaction to vary

select nucleus

then click here

then select reaction

then finally click here

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setting up a sensitivity study

click here

enter your desired rate variations here

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simulation options, notes attached to simulation, and starting run

add notes here

click here to start

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initializing the chosen sensitivity study

wait a bit…

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running the simulation – status report

check here

Page 27: computational infrastructure for nuclear astrophysics step-by ......2D animated nuclide chart of abundance vs. time animation screenshots we will render a movie of these plots to your

running the simulation – status report

check here

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all simulations in sensitivity study completed

click here

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simulation final report – and save the simulation

click here

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saving the simulations in the sensitivity study

enter filename here

click here

click here

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proceed to visualizing the simulations click here

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Element Synthesis Visualizer – you are now using this tool

the simulations you ran are pre-loaded

you can add additional simulations to the list by using the file tree on the left

click here

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plot abundances vs. time

mouseover here to see description, click to launch plot

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choose which nuclei to plot abundance vs. time

select nuclei here

click here

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view, modify, save abundance vs. time plots

select nuclei in specific simulations to plot

Can also plot ratios of abundances from different simulations

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plot abundance vs. rate variation for a sensitivity study

mouseover here to see description, click to launch plot

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plot abundance vs. rate variation for a sensitivity study

this shows the dependence of predicted abundances on variation of input reaction rate

choose to normalize rates

choose nuclei to plot

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plot final weighted abundances vs. zone, for multizone runs

mouseover here to see description, click to launch plot

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plots a ratio of abundances in different sensitivity study runs

choose to plot abundance vs. zone or ratio vs. mass

choose nuclei to plot

choose numerator and denominator

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plot the thermodynamic profiles

mouseover here to see description, click to launch plot

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plot the thermodynamic profiles

choose to plot temperature vs. time or density vs. time

choose simulation to plot

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2D animated nuclide chart of abundance or flux vs. time

mouseover here to see description, click to launch plot

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2D animated nuclide chart of abundance vs. time

choose abundance vs. time

timestep slider control

play animation

customize color mapping

abundance color mapping

choose simulation

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2D animated nuclide chart of abundance vs. time

animation screenshots

we will render a movie of these plots to your specifications

Page 45: computational infrastructure for nuclear astrophysics step-by ......2D animated nuclide chart of abundance vs. time animation screenshots we will render a movie of these plots to your

customizing the color mapping to look for special effects

click here

custom settings preset choices

binned or continuous

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2D animated nuclide chart of reaction flux vs. time

choose flux vs. time

you can customize flux arrow color, width, pattern, mapping …

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plotting out the final abundances (weighted if a multi-zone run)

mouseover here to see description, click to launch plot

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plotting out the final abundances (weighted if a multi-zone run)

customize colormap

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plotting out final abundances & integrated fluxes

mouseover here to see description, click to launch plot

Page 50: computational infrastructure for nuclear astrophysics step-by ......2D animated nuclide chart of abundance vs. time animation screenshots we will render a movie of these plots to your

plotting out final abundances & integrated fluxes

customize flux arrow color, width, pattern, mapping …

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computational infrastructure for nuclear astrophysics

simulations overview •  easily set up and run simulations •  visualize simulations with 1D, 2D plots and animations •  quickly compare simulations with different input •  run automated sensitivity studies (changing input rates) •  analyze simulation results – find bottlenecks, waiting points

-10 -8 -6 -4 -2 0 2 4 6 8 1010 -9

10 -8

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Time (sec)

Ab

un

da

nce

Abundance vs. Time

F18 (18fpa_up3 (zone_01))

F18 (18fpa_normal (zone_01))

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computational infrastructure for nuclear astrophysics

simulations overview •  post-processing code XNET from Raph Hix [ORNL / UTK] •  simulation types: novae, X-ray bursts, solar, CNO, Hot CNO •  single zone and multi-zone simulations •  some simulations with tracer particle temperature/density profiles •  coming soon (1 week): core collapse supernova r-process

Nova Outburst on a 1.35 solar mass WD  

Temperature profile for different spatial zones