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Biogeochemical Cycles
• Ecosystem
– Includes all the organisms that live in a particular place, plus the abiotic environment in which they live and interact
• Biogeochemical cycles
– Chemicals moving through ecosystems
– Biotic and abiotic processes
• Biogeochemical cycles usually cross the
boundaries of ecosystem
– One ecosystem might import or export
chemicals to another2
Biogeochemical Cycles
• Carbon cycle
– Carbon is a major constituent of the bodies
of organisms
– Carbon fixation: metabolic reactions that
make nongaseous compounds from
gaseous ones
– Aerobic cellular respiration releases CO2
– Methanogens: produce methane (CH4) by
anaerobic cellular respiration
3
4
Carbon cycle
Photosynthesis
Photosynthesis
Respiration
Combustion of fuels in
industry, homes, and cars
Plant
Respiration
Food
chainsAnimal
Respiration
Conversion
by geological
processes
Microbial
Respiration
Food
chains
Exchange
between
water and
atmosphere
Oxidation
of methane
Release
of methane
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CO2 in atmosphere
Dissolved CO2 and
HCO3–
Carbon in algae
and plantsCarbon in
animals
Carbon in
fossil fuels
(coal, petroleum)
Carbon in dead
organic matter
Carbon in
animals
Carbon in
plants
Biogeochemical Cycles
• Basic water cycle
– Liquid water from the Earth’s surface evaporates into the atmosphere
– Occurs directly from the surfaces of oceans, lakes, and rivers
– Terrestrial ecosystems: 90% of evaporation is through plants
– Water in the atmosphere is a gas
– Cools and falls to the surface as precipitation
5
Water cycleCopyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display.
Percolation through soil
EvaporationPrecipitation
Condensation
Precipitation
Precipitation
Water in
the oceans
Transpiration
Flow of rivers
to the sea
Evaporation
Gaseous water
(water vapor)
in the
atmosphere
Water in lakes
and rivers
Groundwater
Droplet
water
6
Biogeochemical Cycles
• Nitrogen Cycle
– Nitrogen is a component of all proteins and
nucleic acids
– Usually the element in shortest supply
– Atmosphere is 78% nitrogen
– Availability
• Most plants and animals cannot use N2
(gas)
• Use instead NH3, and NO3–
7
Biogeochemical Cycles
• Nitrogen fixation: synthesis of nitrogen containing compounds from N2
– Nitrification: N2 → NH3 → NO3–
– Denitrification: NO3– → N2
– Both processes are carried out by microbes: free or living on plant roots
– Nitrogenous wastes and fertilizer use radically alter the global nitrogen cycle
– Humans have doubled the rate of transfer of N2 in usable forms into soils and water
8
Nitrogen Cycle
Urea
Excretion
DecompositionDecomposition
Microbial metabolism
Animal excretion
Growth
Food chains
of NH3
N2 in
atmosphere
Nitrogen in
tissues of algae
and plants
Nitrogen in
animal tissues
Nitrogen fixation
by aquatic
cyanobacteriaActivity of
denitrifying microbes
Dissolved NH3 and NO3–
Nitrogen fixation by
soil microbes
Nitrogen in
animal tissues
Nitrogen in
plant tissues
Uptake
by roots
Release
of ammonia
by soil
Soil NH3 and NO3–
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Food
chains
9
Biogeochemical Cycles
• Phosphorus cycle
– Phosphorus is required by all organisms
• Occurs in nucleic acids, membranes, ATP
– No significant gas form
– Exists as PO43– in ecosystems
– Plants and algae use free inorganic phosphorus; animals eat plants to obtain their phosphorus
10
11
Phosphorus cycle
Excretion
Decomposition
Loss in drainage
Precipitation Uptake
by roots
Food
chains
Excretion and
decomposition
Food
chains
Uptake
by roots
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Phosphates in sediment
Phosphates in
plant tissuesPhosphates in
animal tissues
Phosphates in
solution
Soluble
phosphates
in soil
Phosphates in
plant tissues
Phosphates in
animal tissues
Phosphates in
rocks and minerals
Weathering
Flow of Energy in Ecosystems
• Energy is never recycled
• Energy exists as:
– Light
– Chemical-bond energy
– Motion
– Heat
• First Law of Thermodynamics: energy is
neither created nor destroyed; it
changes forms12
Flow of Energy in Ecosystems
• Second Law of Thermodynamics: whenever organisms use chemical-bond or light energy some is converted to heat (entropy)
• Earth functions as an open system for energy
• Sun is our major source of energy
13
Flow of Energy in Ecosystems
• Earth’s incoming and outgoing flows of
radiant energy must be equal for global
temperatures to stay constant
• Human activities are changing the
composition of the atmosphere
• Greenhouse effect: heat accumulating
on Earth, causing global warming
14
Flow of Energy in Ecosystems
• Trophic levels: which level an organism
“feeds” at
• Autotrophs: “self-feeders” synthesize the
organic compounds of their bodies from
inorganic precursors
– Photoautotrophs: light as energy source
– Chemoautotrophs: energy from inorganic
oxidation reactions (prokaryotic)
• Heterotrophs: cannot synthesize organic
compounds from inorganic precursors
– Animals that eat plants and other animals15
Flow of Energy in Ecosystems
• Trophic levels
– Primary producers: autotrophs
– Consumers: heterotrophs
• Herbivores: first consumer level
• Primary carnivores: eat herbivores
• Secondary carnivores: eat primary carnivores or herbivores
• Detritivores: eat decaying matter
–Decomposers: microbes that break up dead matter
16
17
Trophic levels within an ecosystem
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Primary producers
Herbivores
Primary carnivores
Secondary carnivores
Detritivores
Trophic Level 1
Trophic Level 2
Trophic Level 3
Trophic Level 4
Sun
Flow of Energy in Ecosystems
• Productivity: the rate at which the
organisms in the trophic level
collectively synthesize new organic
matter
– Primary productivity: productivity of the
primary producers
– Respiration: rate at which primary
producers break down organic compounds
18
Flow of Energy in Ecosystems
• Gross primary productivity (GPP): raw
rate at which primary producers
synthesize new organic matter
• Net primary productivity (NPP): is the
GPP less the respiration of the primary
producers
• Secondary productivity: productivity of a
heterotroph trophic level
19
Ecologists figure as a rule of thumb that the amount of
chemical-bond energy available to a trophic level over
time is about 10% of that available to the preceding
level over the same period of time20
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Heat
1%
Feces and death
Detritivores
Chemical-bond
energy in dead
bodies, feces,
and other non-
living organic
products useful
only to
detritivores.
Solar energy
Herbivores
Primary
producers
Primary
carnivores
Respiration
Secondary
carnivores
Trophic-level interactions
• Trophic cascade: process by which effects exerted at an upper level flow down to influence two or more lower levels
– Top-down effects: when effects flow down
– Bottom-up effects: when effect flows up through a trophic chain
21
22
Top-down effectsEnclosures with brown trout had fewer herbivorous
invertebrates and more algae than ones without trout
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0
5000
No fish Trout No fish Trout
2.0
1.5
1.0
0.5
4000
3000
2000
1000
0
Inve
rte
bra
tes (
nu
mb
er/
m2)
Alg
ae
(u
g c
glo
rop
hyll
a/c
m2)
23
Top-down effectsStream enclosures with large carnivorous fish have
fewer primary carnivores, more herbivorous insects, and
a lower level of algae
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Carnivorous
damselfly
nymphs
No Fish
High
Herbivorous
insects
Low
Algae Carnivorous
damselfly
nymphs
Low
Herbivorous
insectsAlgae
Fish
High
Po
pu
lati
on
Siz
e
Po
pu
lati
on
Siz
e
Biodiversity and Stability
• Species richness is influenced by
ecosystem characteristics
– Primary productivity
– Habitat heterogeneity
• Accommodate more species
– Climatic factors
• More species might be expected to
coexist in seasonal environment
24
Biodiversity and Stability
• Tropical regions have the highest diversity
– Species diversity cline: biogeographic gradient in number of species correlated with latitude
• Reported for plants and animals
– Evolutionary age of tropical regions
– Increased productivity
– Stability/constancy of conditions
– Predation
– Spatial heterogeneity25