1 introduction to chemistry bio-chemistry “the chemistry of life”

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1

Introduction to Chemistry

Bio-Chemistry

“The Chemistry of Life”

2

The Atomic Theory

• All matter (living and non-living) found on Earth is composed of atoms.

3

The Atomic Theory

• In the following video, please define the following terms:

–amu

–isotope

4

Introduction to Chemistry

5

Basic Chemistry

• Atom: Smallest particle an element can be divided into.

• Parts of the Atom:– Proton: positive charge, in nucleus.– Neutron: no charge, in nucleus.– Electron: negative charge, around the

nucleus.

Atom• Is now defined as the smallest particle of an

element that retains the chemical properties of that element.

Nucleus(protonsand neutrons)

Electrons

Animation: Subatomic Particles

PLAYANIMATION

8

Basic Chemistry

• Element: A pure substance or

material composed of only one type

of atom.

9

Periodic Table of Elements

The Periodic Table• The periodic table is broken down into vertical column

called groups or families numbered from left to right (1-18) and…

• horizontal rows called periods numbered from top to bottom (1-7)

Types of Elements

• For the most part you can divide the periodic table into two main parts, Metals and Non-metals.

Metals

• Metals are located of the left side of the table and make up approximately 88% of all elements.

• Are generally good conductors of both heat and electricity.

• Most are solids as well as malleable and ductile.

Nonmetals

• Are located on the right side of the periodic table and comprise approximately 12% of all elements.

• Are poor conductors of electricity and heat, tend to be brittle, and are often (though not always) found as gases in nature.

Metalloids

• Are elements that have some characteristics of metals and also some non-metal characteristics.

• They are located along the “stair step” line on the right side of the periodic table.

• All are solids, are less malleable than metals but not as brittle as non-metals.

• Tend to be semi-conductors of electricity.

Noble Gases

• Found in group 18 of the periodic table.

• Generally un-reactive.

• Gases at room temperature.

16

Basic Chemistry

• Molecule: – Atoms make up molecules.

– Two or more atoms bonded together.

• One type of atom (ex: O2)

• Two or more types of atoms (ex: H2O)

17

Basic Chemistry

• Compound: – Atoms make up compounds.

– Two or more elements bonded together.

• Two or more types of atoms (ex: H2O)

18

Basic Chemistry

• Atomic Number:– The number of Protons in the

nucleus of an atom of a particular element.

19

Basic Chemistry

• Atomic Mass:– The number of Protons + the number

of Neutrons in the nucleus of an atom of a particular element.

Atomic Number

Symbol

66

CCCarbonCarbon

12.01112.011

[He]2s[He]2s222p2p22

Name

Average atomic mass

Electron configuration

Isotopes

Atoms of the same element (the same number of protons) with different numbers of neutrons.

They have identical atomic numbers but different mass numbers.

ISOTOPES

23

The Four Most Common Elements in Living Matter

• Atomic Number 6 - Carbon

• Atomic Number 1 - Hydrogen

• Atomic Number 8 - Oxygen

• Atomic Number 7 - Nitrogen

Electron Energy Levels

• Within the electron cloud, electrons are arranged in “energy levels”.

• Electrons in each energy level have a specific amount of energy

• Each energy level can only hold a specific number of electrons.

12

43

Atomic Structures

Combinations• Few elements exist as

independent particles, most substances are made up of combinations of atoms held together by chemical bonds.

Octet Rule

• “Eight is great”

• The outer valence shell can hold a maximum of 8 electrons

• Achieving the maximum number of e- in this valence shell results in a stable “content” atom.

27

Chemical Bond

A mutual electrical attraction between the nuclei and valence electrons of different atoms that binds the atoms together.

Why Atoms Bond to Other Atoms

Most atoms are less stable existing by themselves (they are at a relatively high potential energy). Nature favors arrangements in which potential energy is minimized. Bonding creates more stable arrangements of matter in lower potential energy states. (Mama Nature doesn’t like to sweat!).

Bonding

• Valence electrons are redistributed. Two main types:

Covalent

Ionic

Types of Chemical BondingIonic vs. Covalent

• Electrical attraction between cations and anions.

• Due to gain or loss of electrons (also called electron transfer) between atoms.

• Sharing of electron pairs between atoms

• H2

• H2O

Animation: Atomic Number, Mass Number

PLAYANIMATION

Ions• An ion is an atom or group of atoms with one

or more net positive or negative electrical charges.

• The number of positive or negative charges on an ion is shown as a superscript after the symbol for an atom or group of atoms – Hydrogen ions (H+), Hydroxide ions (OH-)– Sodium ions (Na+), Chloride ions (Cl-)

Animation: Ionic Bonds

PLAYANIMATION

Electron Dot Notation

An electron configuration notation in which only the valence electrons of an atom of a particular element are shown, indicated by dots placed around the element’s symbol.

Lewis Structures

• Using electron-dot notation to represent molecules.

G. N. Lewis1875 - 1946

Lewis Structures• Formulas in which

atomic symbols represent nuclei and inner-shell electrons, dot-pairs or dashes represent electron pairs in covalent bonds, and dots adjacent to only one symbol represent unshared electrons.

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