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Amino Acid Biosynthesis Families of Amino Acids Essential vs Non- Essential Amino Acids • Synthesis One carbon carriers Synthesis from Amino Acids

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Page 1: Amino Acid Biosynthesis - WOU Homepagewou.edu/~guralnl/gural/451Amino Acid Biosynthesis.pdfAmino Acid Biosynthesis • Families of Amino Acids • Essential vs Non-Essential Amino

Amino Acid Biosynthesis• Families of Amino

Acids• Essential vs Non-

Essential Amino Acids

• Synthesis• One carbon carriers• Synthesis from Amino

Acids

Page 2: Amino Acid Biosynthesis - WOU Homepagewou.edu/~guralnl/gural/451Amino Acid Biosynthesis.pdfAmino Acid Biosynthesis • Families of Amino Acids • Essential vs Non-Essential Amino

Families of Amino Acids

• OAA • PEP + Erythrose 4P • pyruvate • Ribose 5P • ketoglutarate• 3-phosphoglycerate

Page 3: Amino Acid Biosynthesis - WOU Homepagewou.edu/~guralnl/gural/451Amino Acid Biosynthesis.pdfAmino Acid Biosynthesis • Families of Amino Acids • Essential vs Non-Essential Amino

Essential vs Non-Essential Amino Acids

Page 4: Amino Acid Biosynthesis - WOU Homepagewou.edu/~guralnl/gural/451Amino Acid Biosynthesis.pdfAmino Acid Biosynthesis • Families of Amino Acids • Essential vs Non-Essential Amino

Synthesis

• Nitrogen fixation• Prokaryotic cells• 16 ATP

• Ammonia assimilated in amino acids

• glutamate

Page 5: Amino Acid Biosynthesis - WOU Homepagewou.edu/~guralnl/gural/451Amino Acid Biosynthesis.pdfAmino Acid Biosynthesis • Families of Amino Acids • Essential vs Non-Essential Amino

Transamination

• Transamination reaction • Determines chirality

Page 6: Amino Acid Biosynthesis - WOU Homepagewou.edu/~guralnl/gural/451Amino Acid Biosynthesis.pdfAmino Acid Biosynthesis • Families of Amino Acids • Essential vs Non-Essential Amino

Eukaryotes

• Glutamate dehydrogenas• Gluatamine synthetase

Page 7: Amino Acid Biosynthesis - WOU Homepagewou.edu/~guralnl/gural/451Amino Acid Biosynthesis.pdfAmino Acid Biosynthesis • Families of Amino Acids • Essential vs Non-Essential Amino

Synthesis of amino acids

• One step synthesis of some amino acids

• pyruvate to alanine• OAA to aspartate• ketoglutarate to

glutamate

Page 8: Amino Acid Biosynthesis - WOU Homepagewou.edu/~guralnl/gural/451Amino Acid Biosynthesis.pdfAmino Acid Biosynthesis • Families of Amino Acids • Essential vs Non-Essential Amino

Aromatic Amino acids

• long biochemical pathways

• shikimate acid pathway

• produce phenylalanine, tyrosine & tryptophan

• glyphosphate(roundup) inhibits

Page 9: Amino Acid Biosynthesis - WOU Homepagewou.edu/~guralnl/gural/451Amino Acid Biosynthesis.pdfAmino Acid Biosynthesis • Families of Amino Acids • Essential vs Non-Essential Amino

One carbon carriers • Tetrahydrofolate (THF) • one carbon carrier • different oxidation states • usually not reduced • sulfa drugs inhibit bacteria • mammals cannot synthesize

Page 10: Amino Acid Biosynthesis - WOU Homepagewou.edu/~guralnl/gural/451Amino Acid Biosynthesis.pdfAmino Acid Biosynthesis • Families of Amino Acids • Essential vs Non-Essential Amino

THF

Page 11: Amino Acid Biosynthesis - WOU Homepagewou.edu/~guralnl/gural/451Amino Acid Biosynthesis.pdfAmino Acid Biosynthesis • Families of Amino Acids • Essential vs Non-Essential Amino

S-Adenosylmethionine

• donates methyl groups • produced from methionine• uses ATP

Page 12: Amino Acid Biosynthesis - WOU Homepagewou.edu/~guralnl/gural/451Amino Acid Biosynthesis.pdfAmino Acid Biosynthesis • Families of Amino Acids • Essential vs Non-Essential Amino

Methyl Cycle

Page 13: Amino Acid Biosynthesis - WOU Homepagewou.edu/~guralnl/gural/451Amino Acid Biosynthesis.pdfAmino Acid Biosynthesis • Families of Amino Acids • Essential vs Non-Essential Amino

Synthesis from Amino Acids

• Creatine• glutathione • porphyrins• Nitric oxide • hormones: thyroxine,

epinephrine, histamine

Page 14: Amino Acid Biosynthesis - WOU Homepagewou.edu/~guralnl/gural/451Amino Acid Biosynthesis.pdfAmino Acid Biosynthesis • Families of Amino Acids • Essential vs Non-Essential Amino

Hormones/lipids

Page 15: Amino Acid Biosynthesis - WOU Homepagewou.edu/~guralnl/gural/451Amino Acid Biosynthesis.pdfAmino Acid Biosynthesis • Families of Amino Acids • Essential vs Non-Essential Amino

Heme

Degradation of Hemes