alfalfa breeding at fgsymposium/2014/files/ppt/14... · 2014. 12. 24. · enzyme 1 enzyme 2 gene 1...

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Alfalfa Breeding at FGI Improved forage yield Yield per se Persistence per se Changes in FD/WH relationship Improved forage quality Conventional breeding GE traits Increased tolerance to biotic/abiotic stresses Multiple pest resistance Selection strategies for tolerance to abiotic stresses

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Page 1: Alfalfa Breeding at FGsymposium/2014/files/ppt/14... · 2014. 12. 24. · Enzyme 1 Enzyme 2 Gene 1 Gene 2 Use genetic engineering to ... 1st cut 5/9 = 3.60 T/A 1st cut 5/15 = 4.55

Alfalfa Breeding at FGI •  Improved forage yield

–  Yield per se –  Persistence per se –  Changes in FD/WH relationship

•  Improved forage quality –  Conventional breeding –  GE traits

•  Increased tolerance to biotic/abiotic stresses –  Multiple pest resistance –  Selection strategies for tolerance to abiotic stresses

Page 2: Alfalfa Breeding at FGsymposium/2014/files/ppt/14... · 2014. 12. 24. · Enzyme 1 Enzyme 2 Gene 1 Gene 2 Use genetic engineering to ... 1st cut 5/9 = 3.60 T/A 1st cut 5/15 = 4.55

FGI Research – New Traits

•  Native Genes – Abiotic stress (Salt/Drought/Cold) – Pest resistance – Traditional and molecular approaches

•  Novel alleles – mutations •  GE traits

– Herbicide tolerance (RRA) – Quality traits

Page 3: Alfalfa Breeding at FGsymposium/2014/files/ppt/14... · 2014. 12. 24. · Enzyme 1 Enzyme 2 Gene 1 Gene 2 Use genetic engineering to ... 1st cut 5/9 = 3.60 T/A 1st cut 5/15 = 4.55

Re-Designing Alfalfa for Improved Forage Quality

Mark McCaslin Forage Genetics

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USDFRC

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Re-Designing Alfalfa for Improved Forage Quality

•  The CAI concept: –  Interdisciplinary, inter-institutional collaboration – Ruminant nutrition – Biochemistry – Plant molecular biology – Plant breeding/agronomy

•  CAI target traits – “re-designing alfalfa” –  Increased cell wall digestibility –  Improved efficiency of protein utilization

Page 6: Alfalfa Breeding at FGsymposium/2014/files/ppt/14... · 2014. 12. 24. · Enzyme 1 Enzyme 2 Gene 1 Gene 2 Use genetic engineering to ... 1st cut 5/9 = 3.60 T/A 1st cut 5/15 = 4.55

Reduced Lignin Alfalfa •  Lignin increases with advanced maturity in alfalfa. •  Lignin is indigestible, and binds with cellulose/

hemicellulose – reducing fiber digestibility. •  Reducing lignin content should increase fiber

digestibility and alter change in quality w/ maturity. •  Genetic engineering can be used to reduce lignin

content in alfalfa –  “knockout” genes for key enzymes in the lignin biosynthetic

pathway.

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Gene knockout to modify lignin pathway

Compound A

Compound B

Lignin

Enzyme 1

Enzyme 2

Gene 1

Gene 2

Use genetic engineering to knockout/silence “lignin

gene(s)” in alfalfa

Reduced lignin alfalfa

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2008 Summary – RL1 Alfalfa

0

5

10

15

20

25

30

35

40

Yield Lodging ADL NDFD

RL transgenicnull

28% lignin reduction

24% increase in fiber digestibility

Note: lower stem samples, CAI equation, average of 25 elite events

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Proof of Concept FGI Reduced Lignin Alfalfa

April 27, 2007

Page 10: Alfalfa Breeding at FGsymposium/2014/files/ppt/14... · 2014. 12. 24. · Enzyme 1 Enzyme 2 Gene 1 Gene 2 Use genetic engineering to ... 1st cut 5/9 = 3.60 T/A 1st cut 5/15 = 4.55

Land O’ Lakes Purina Feed Large Animal Metabolism Unit (LAMU)

Page 11: Alfalfa Breeding at FGsymposium/2014/files/ppt/14... · 2014. 12. 24. · Enzyme 1 Enzyme 2 Gene 1 Gene 2 Use genetic engineering to ... 1st cut 5/9 = 3.60 T/A 1st cut 5/15 = 4.55

USDFRC Sheep Feeding Studies

Page 12: Alfalfa Breeding at FGsymposium/2014/files/ppt/14... · 2014. 12. 24. · Enzyme 1 Enzyme 2 Gene 1 Gene 2 Use genetic engineering to ... 1st cut 5/9 = 3.60 T/A 1st cut 5/15 = 4.55

RL1 Alfalfa Changes in NDF Digestibility over Time

40

45

50

55

60

NDFD%

• Early bud • Late bud • 10% bloom

• Reduced lignin

• Null control

• RL Alfalfa = Increased flexibility in harvest timing

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Yield/Quality Tradeoff

Putnam and Orloff, 2013

Page 14: Alfalfa Breeding at FGsymposium/2014/files/ppt/14... · 2014. 12. 24. · Enzyme 1 Enzyme 2 Gene 1 Gene 2 Use genetic engineering to ... 1st cut 5/9 = 3.60 T/A 1st cut 5/15 = 4.55

RL/RRA RRA only Liberator 54H11

June 18, 2011 West Salem, WI

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2011-12 Combined Data

40

45

50

55

60

65

70

75

RR/RL 54H11 Liberator

7 Cuts 9 Cuts

Yiel

d- L

bs p

er p

lot

FGI/Monsanto Confidential

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2011 RL Cutting Management Test Touchet, WA

Six Harvests Five Harvests

Spring Regrowth: 03-05-2013

1st cut 5/9 = 3.60 T/A 1st cut 5/15 = 4.55 T/A

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4 cuts/35d cutting schedule 5 cuts/28d cutting schedule

2011 RL Cutting Management Test Boone, IA

Photo: May 7, 2013

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2011-12 Combined Data

25

30

35

40

45

RR/RL 54H11 Liberator

ND

FD

7 Cuts 9 Cuts

FGI/Monsanto Confidential

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HarvXtra™ Alfalfa

•  In an effort to bring the industry’s first quality-enhancing trait to market, FGI would like to announce that the reduced lignin trait will be known as HarvXtra™ alfalfa.

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HarvXtra™ Alfalfa Product Concept •  10-15% increase in whole plant NDFD*

– enables a delayed harvest •  Breeding stack w/ RRA

– 90% trait purity – both traits •  Competitive agronomic performance

– Excellent forage yield – No increase in lodging incidence – MPR, WH and persistence = best in class

*NDFD should not be interpreted as a direct measurement or prediction of animal performance potential, but simply as one of several forage quality metrics commonly used by the forage community.

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75%

80%

85%

90%

95%

100%

105%

110%

115%

120%

125%

% C

heck

s

2013/14 - 5 locations/37 total harvests

ADL

NDFD

HarvXtra FD Exptl vs Checks

Page 22: Alfalfa Breeding at FGsymposium/2014/files/ppt/14... · 2014. 12. 24. · Enzyme 1 Enzyme 2 Gene 1 Gene 2 Use genetic engineering to ... 1st cut 5/9 = 3.60 T/A 1st cut 5/15 = 4.55

HarvXtra ND Exptl vs Checks

75%

80%

85%

90%

95%

100%

105%

110%

115%

120%

125%

% C

heck

s

2014 - 2 locations/15 total harvests

ADL

NDFD

Page 23: Alfalfa Breeding at FGsymposium/2014/files/ppt/14... · 2014. 12. 24. · Enzyme 1 Enzyme 2 Gene 1 Gene 2 Use genetic engineering to ... 1st cut 5/9 = 3.60 T/A 1st cut 5/15 = 4.55

HarvXtra™ Alfalfa Potential Benefits •  Delayed harvest advantages

– Fewer harvests – Higher forage yield –  Improved persistence – Unique forage quality parameters –  Increased harvest timing flexibility

•  Forage quality advantage – Higher likelihood of harvesting premium

quality hay

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HarvXtra™ Timeline •  Q4 2014 Deregulation U.S./Canada •  Deregulation pending:

– Hay export markets – MX and Argentina

•  2015 on-farm testing in Midwest •  2016 limited launch, pending global

approvals. •  2017 broader commercial launch

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Tannin Alfalfa •  FGI/Noble/USDFRC collaboration to improve

efficiency of alfalfa protein utilization for dairy. •  Tannins bind with protein, slowing rate of rumen

degradation and increasing RUP (bypass protein). –  Increasing RUP 20% à 30% would eliminate need for

protein supplements •  Condensed tannins can be found in alfalfa seed

coats, but not leaves or stems. –  Genetic engineering can be used to modify gene

expression, producing Tannin Alfalfa.

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Proanthocyanidins (Condensed tannins)

Lc2 LAP1

Condensed Tannin Biosynthesis

Page 27: Alfalfa Breeding at FGsymposium/2014/files/ppt/14... · 2014. 12. 24. · Enzyme 1 Enzyme 2 Gene 1 Gene 2 Use genetic engineering to ... 1st cut 5/9 = 3.60 T/A 1st cut 5/15 = 4.55

Proanthocyanidins (Condensed tannins)

Evaluation of various CT pathway regulatory genes

Condensed Tannin Biosynthesis

Page 28: Alfalfa Breeding at FGsymposium/2014/files/ppt/14... · 2014. 12. 24. · Enzyme 1 Enzyme 2 Gene 1 Gene 2 Use genetic engineering to ... 1st cut 5/9 = 3.60 T/A 1st cut 5/15 = 4.55

Control CT transgenic

DMACA Staining for CT in Alfalfa

Pardee BFT

Page 29: Alfalfa Breeding at FGsymposium/2014/files/ppt/14... · 2014. 12. 24. · Enzyme 1 Enzyme 2 Gene 1 Gene 2 Use genetic engineering to ... 1st cut 5/9 = 3.60 T/A 1st cut 5/15 = 4.55

Tannin Alfalfa Next Steps •  Improve CT characterization

– Content and composition •  Assay development – RUP effect

–  in vitro assay – Small scale animal feeding trial late 2015

•  Pre-breeding and trait development to fully test CT Product Concept

Page 30: Alfalfa Breeding at FGsymposium/2014/files/ppt/14... · 2014. 12. 24. · Enzyme 1 Enzyme 2 Gene 1 Gene 2 Use genetic engineering to ... 1st cut 5/9 = 3.60 T/A 1st cut 5/15 = 4.55

Tannin Alfalfa •  USDFRC MW dairy model for tannin alfalfa:

–  60% reduction in protein feed supplementation –  Up to 12% increase in net return for dairy –  25% reduction in N losses –  Increase value of alfalfa silage by $23/T

•  Tannin containing forages are non-bloating –  Worldwide alfalfa related

bloat losses > $200M

Page 31: Alfalfa Breeding at FGsymposium/2014/files/ppt/14... · 2014. 12. 24. · Enzyme 1 Enzyme 2 Gene 1 Gene 2 Use genetic engineering to ... 1st cut 5/9 = 3.60 T/A 1st cut 5/15 = 4.55

Collaboration Team Leaders •  Noble Fdn – Rick Dixon/Fang Chen •  USDFRC – Martin/Riday/Mertens •  AgCanada – Margie Gruber •  U of Victoria – Peter Constable •  NZ AgResearch – Kerry Hancock •  UCD – Dan Putnam •  UW – Dan Undersander •  LOL/Purina – David Weakley •  Pioneer – Dave Miller •  FGI – Temple/Whalen/McCaslin