([adehcd40l] [untreated]) gene symbol gene title refseq ... · 227254_at 3.15 down 1.39 down pou2f1...

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Supplemental Table 1a. Differential Gene Expression Profile of AdEHCD40L and AdEHNull treated cells vs Untreated Cells Probe Set ID Fold change ([AdEHCD40L] vs [Untreated]) Regulation ([AdEHCD40L] vs [Untreated]) Fold change ([AdEHNull] vs [Untreated]) Regulation ([AdEHNull] vs [Untreated]) Gene Symbol Gene Title RefSeq Transcript ID 203942_s_at 2.02 down 1.00 down MARK2 MAP/microtubule affinity-regulating kinase 2 NM_001039468 /// NM_001039469 /// NM_004954 /// NM_017490 217985_s_at 2.09 down 1.00 down BAZ1A bromodomain adjacent to zinc finger domain, 1A NM_013448 /// NM_182648 203638_s_at 2.10 down 1.01 down FGFR2 growth factor receptor, craniofacial dysostosis 1, Crouzon syndrome, Pfeiffer syndrome, Jackson-Weiss syndrome) NM_000141 /// NM_022970 1570445_a_at 2.07 down 1.01 down LOC643201 hypothetical protein LOC643201 XM_001716444 /// XM_001717933 /// XM_932161 231763_at 3.05 down 1.02 down POLR3A polymerase (RNA) III (DNA directed) polypeptide A, 155kDa NM_007055 1555368_x_at 2.08 down 1.04 down ZNF479 zinc finger protein 479 NM_033273 /// XM_001714591 /// XM_001719979 241627_x_at 2.15 down 1.05 down FLJ10357 hypothetical protein FLJ10357 NM_018071 223208_at 2.17 down 1.06 down KCTD10 potassium channel tetramerisation domain containing 10 NM_031954 219923_at 2.09 down 1.07 down TRIM45 tripartite motif-containing 45 NM_025188 242772_x_at 2.03 down 1.07 down Transcribed locus 233019_at 2.19 down 1.08 down CNOT7 CCR4-NOT transcription complex, subunit 7 NM_013354 /// NM_054026 223139_s_at 2.09 down 1.08 down DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 NM_001114397 /// NM_020865 1569594_a_at 2.17 down 1.09 down SDCCAG1 serologically defined colon cancer antigen 1 NM_004713 238518_x_at 2.13 down 1.09 down GLYCTK glycerate kinase NM_145262 217650_x_at 2.83 down 1.09 down ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 NM_006927 218862_at 2.12 down 1.13 down ASB13 ankyrin repeat and SOCS box-containing 13 NM_024701 215587_x_at 2.83 down 1.13 down CDNA FLJ13829 fis, clone THYRO1000625 215623_x_at 2.33 down 1.13 down SMC4 structural maintenance of chromosomes 4 NM_001002800 /// NM_005496 231479_at 2.00 down 1.14 down TTC33 tetratricopeptide repeat domain 33 NM_012382 222854_s_at 2.05 down 1.14 down GEMIN8 gem (nuclear organelle) associated protein 8 NM_001042479 /// NM_001042480 /// NM_017856 242766_at 2.13 down 1.14 down Homo sapiens, clone IMAGE:3660074, mRNA 228766_at 2.45 down 1.15 down 200598_s_at 2.11 down 1.16 down HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 NM_003299 221755_at 2.10 down 1.17 down EHBP1L1 EH domain binding protein 1-like 1 NM_001099409 1556082_a_at 2.20 down 1.18 down CDNA FLJ33441 fis, clone BRACE2021932 205099_s_at 2.01 down 1.18 down CCR1 chemokine (C-C motif) receptor 1 NM_001295 203731_s_at 2.00 down 1.18 down ZKSCAN5 zinc finger with KRAB and SCAN domains 5 NM_014569 /// NM_145102 233511_at 2.07 down 1.18 down CDNA clone IMAGE:5271538 235985_at 2.89 down 1.18 down Transcribed locus 214987_at 2.41 down 1.19 down CDNA clone IMAGE:4801326 230888_at 2.18 down 1.19 down WDR91 WD repeat domain 91 NM_014149 225272_at 2.04 down 1.20 down SAT2 spermidine/spermine N1-acetyltransferase family member 2 NM_133491 201491_at 2.02 down 1.20 down AHSA1 AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast) NM_012111 205240_at 2.74 down 1.20 down GPSM2 G-protein signaling modulator 2 (AGS3-like, C. elegans) NM_013296 229466_at 2.14 down 1.21 down LOC256273 hypothetical protein LOC256273 227507_at 2.06 down 1.22 down ZNF592 zinc finger protein 592 NM_014630 225377_at 2.21 down 1.22 down C9orf86 chromosome 9 open reading frame 86 NM_017995 /// NM_024718 212601_at 2.47 down 1.22 down ZZEF1 zinc finger, ZZ-type with EF-hand domain 1 NM_015113 228789_at 2.92 down 1.24 down MTMR6 myotubularin related protein 6 NM_004685 205854_at 2.44 down 1.24 down TULP3 tubby like protein 3 NM_003324 214836_x_at 2.04 down 1.26 down IGKC immunoglobulin kappa constant 218895_at 2.82 down 1.26 down GPATCH3 G patch domain containing 3 NM_022078 215521_at 2.16 down 1.27 down PHC3 polyhomeotic homolog 3 (Drosophila) NM_024947 204492_at 2.26 down 1.27 down ARHGAP11A Rho GTPase activating protein 11A NM_014783 /// NM_199357 /// XM_001714495 221436_s_at 2.14 down 1.28 down CDCA3 cell division cycle associated 3 NM_031299 224736_at 2.63 down 1.28 down CCAR1 cell division cycle and apoptosis regulator 1 NM_018237 214965_at 2.17 down 1.29 down SPATA2L spermatogenesis associated 2-like NM_152339 235084_x_at 2.56 down 1.30 down Transcribed locus 244792_at 2.06 down 1.31 down 235696_at 2.33 down 1.31 down CDNA clone IMAGE:4837650 229483_at 2.09 down 1.31 down CDNA FLJ42331 fis, clone TSTOM2000588 64488_at 2.31 down 1.31 down CDNA FLJ38849 fis, clone MESAN2008936 201674_s_at 2.40 down 1.32 down AKAP1 A kinase (PRKA) anchor protein 1 NM_003488 220342_x_at 2.41 down 1.32 down EDEM3 ER degradation enhancer, mannosidase alpha-like 3 NM_025191 233509_at 2.26 down 1.33 down HERC4 hect domain and RLD 4 NM_015601 /// NM_022079 202386_s_at 2.02 down 1.33 down KIAA0430 KIAA0430 NM_014647 220305_at 2.08 down 1.34 down MGC3260 hypothetical LOC78993 228897_at 2.08 down 1.34 down DERL3 Der1-like domain family, member 3 NM_001002862 /// NM_198440 228723_at 2.14 down 1.34 down CDNA FLJ30445 fis, clone BRACE2009238 239294_at 2.31 down 1.35 down Transcribed locus 208993_s_at 3.01 down 1.35 down PPIG peptidylprolyl isomerase G (cyclophilin G) NM_004792 203264_s_at 2.17 down 1.36 down ARHGEF9 Cdc42 guanine nucleotide exchange factor (GEF) 9 NM_015185 217164_at 2.16 down 1.36 down 218756_s_at 2.12 down 1.36 down MGC4172 short-chain dehydrogenase/reductase NM_024308 228252_at 2.09 down 1.36 down PIF1 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) NM_025049 235782_at 2.52 down 1.36 down Transcribed locus 211969_at 2.13 down 1.37 down HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 NM_001017963 /// NM_005348 215942_s_at 2.01 down 1.37 down GTSE1 G-2 and S-phase expressed 1 NM_016426 227811_at 2.17 down 1.38 down FGD3 FYVE, RhoGEF and PH domain containing 3 NM_001083536 /// NM_033086 210625_s_at 2.35 down 1.38 down AKAP1 A kinase (PRKA) anchor protein 1 NM_003488 210993_s_at 2.24 down 1.38 down SMAD1 SMAD family member 1 NM_001003688 /// NM_005900 224520_s_at 5.02 down 1.39 down BEST3 bestrophin 3 NM_032735 /// NM_152439

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Page 1: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

Supplemental Table 1a. Differential Gene Expression Profile of AdEHCD40L and AdEHNull treated cells vs Untreated Cells

Probe Set ID

Fold change

([AdEHCD40L] vs

[Untreated])

Regulation

([AdEHCD40L]

vs [Untreated])

Fold change

([AdEHNull] vs

[Untreated])

Regulation

([AdEHNull] vs

[Untreated]) Gene Symbol Gene Title RefSeq Transcript ID

203942_s_at 2.02 down 1.00 down MARK2 MAP/microtubule affinity-regulating kinase 2

NM_001039468 /// NM_001039469 /// NM_004954 ///

NM_017490

217985_s_at 2.09 down 1.00 down BAZ1A bromodomain adjacent to zinc finger domain, 1A NM_013448 /// NM_182648

203638_s_at 2.10 down 1.01 down FGFR2

fibroblast growth factor receptor 2 (bacteria-expressed kinase, keratinocyte

growth factor receptor, craniofacial dysostosis 1, Crouzon syndrome, Pfeiffer

syndrome, Jackson-Weiss syndrome) NM_000141 /// NM_022970

1570445_a_at 2.07 down 1.01 down LOC643201 hypothetical protein LOC643201 XM_001716444 /// XM_001717933 /// XM_932161

231763_at 3.05 down 1.02 down POLR3A polymerase (RNA) III (DNA directed) polypeptide A, 155kDa NM_007055

1555368_x_at 2.08 down 1.04 down ZNF479 zinc finger protein 479 NM_033273 /// XM_001714591 /// XM_001719979

241627_x_at 2.15 down 1.05 down FLJ10357 hypothetical protein FLJ10357 NM_018071

223208_at 2.17 down 1.06 down KCTD10 potassium channel tetramerisation domain containing 10 NM_031954

219923_at 2.09 down 1.07 down TRIM45 tripartite motif-containing 45 NM_025188

242772_x_at 2.03 down 1.07 down Transcribed locus

233019_at 2.19 down 1.08 down CNOT7 CCR4-NOT transcription complex, subunit 7 NM_013354 /// NM_054026

223139_s_at 2.09 down 1.08 down DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 NM_001114397 /// NM_020865

1569594_a_at 2.17 down 1.09 down SDCCAG1 serologically defined colon cancer antigen 1 NM_004713

238518_x_at 2.13 down 1.09 down GLYCTK glycerate kinase NM_145262

217650_x_at 2.83 down 1.09 down ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 NM_006927

218862_at 2.12 down 1.13 down ASB13 ankyrin repeat and SOCS box-containing 13 NM_024701

215587_x_at 2.83 down 1.13 down CDNA FLJ13829 fis, clone THYRO1000625

215623_x_at 2.33 down 1.13 down SMC4 structural maintenance of chromosomes 4 NM_001002800 /// NM_005496

231479_at 2.00 down 1.14 down TTC33 tetratricopeptide repeat domain 33 NM_012382

222854_s_at 2.05 down 1.14 down GEMIN8 gem (nuclear organelle) associated protein 8 NM_001042479 /// NM_001042480 /// NM_017856

242766_at 2.13 down 1.14 down Homo sapiens, clone IMAGE:3660074, mRNA

228766_at 2.45 down 1.15 down

200598_s_at 2.11 down 1.16 down HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 NM_003299

221755_at 2.10 down 1.17 down EHBP1L1 EH domain binding protein 1-like 1 NM_001099409

1556082_a_at 2.20 down 1.18 down CDNA FLJ33441 fis, clone BRACE2021932

205099_s_at 2.01 down 1.18 down CCR1 chemokine (C-C motif) receptor 1 NM_001295

203731_s_at 2.00 down 1.18 down ZKSCAN5 zinc finger with KRAB and SCAN domains 5 NM_014569 /// NM_145102

233511_at 2.07 down 1.18 down CDNA clone IMAGE:5271538

235985_at 2.89 down 1.18 down Transcribed locus

214987_at 2.41 down 1.19 down CDNA clone IMAGE:4801326

230888_at 2.18 down 1.19 down WDR91 WD repeat domain 91 NM_014149

225272_at 2.04 down 1.20 down SAT2 spermidine/spermine N1-acetyltransferase family member 2 NM_133491

201491_at 2.02 down 1.20 down AHSA1 AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast) NM_012111

205240_at 2.74 down 1.20 down GPSM2 G-protein signaling modulator 2 (AGS3-like, C. elegans) NM_013296

229466_at 2.14 down 1.21 down LOC256273 hypothetical protein LOC256273

227507_at 2.06 down 1.22 down ZNF592 zinc finger protein 592 NM_014630

225377_at 2.21 down 1.22 down C9orf86 chromosome 9 open reading frame 86 NM_017995 /// NM_024718

212601_at 2.47 down 1.22 down ZZEF1 zinc finger, ZZ-type with EF-hand domain 1 NM_015113

228789_at 2.92 down 1.24 down MTMR6 myotubularin related protein 6 NM_004685

205854_at 2.44 down 1.24 down TULP3 tubby like protein 3 NM_003324

214836_x_at 2.04 down 1.26 down IGKC immunoglobulin kappa constant

218895_at 2.82 down 1.26 down GPATCH3 G patch domain containing 3 NM_022078

215521_at 2.16 down 1.27 down PHC3 polyhomeotic homolog 3 (Drosophila) NM_024947

204492_at 2.26 down 1.27 down ARHGAP11A Rho GTPase activating protein 11A NM_014783 /// NM_199357 /// XM_001714495

221436_s_at 2.14 down 1.28 down CDCA3 cell division cycle associated 3 NM_031299

224736_at 2.63 down 1.28 down CCAR1 cell division cycle and apoptosis regulator 1 NM_018237

214965_at 2.17 down 1.29 down SPATA2L spermatogenesis associated 2-like NM_152339

235084_x_at 2.56 down 1.30 down Transcribed locus

244792_at 2.06 down 1.31 down

235696_at 2.33 down 1.31 down CDNA clone IMAGE:4837650

229483_at 2.09 down 1.31 down CDNA FLJ42331 fis, clone TSTOM2000588

64488_at 2.31 down 1.31 down CDNA FLJ38849 fis, clone MESAN2008936

201674_s_at 2.40 down 1.32 down AKAP1 A kinase (PRKA) anchor protein 1 NM_003488

220342_x_at 2.41 down 1.32 down EDEM3 ER degradation enhancer, mannosidase alpha-like 3 NM_025191

233509_at 2.26 down 1.33 down HERC4 hect domain and RLD 4 NM_015601 /// NM_022079

202386_s_at 2.02 down 1.33 down KIAA0430 KIAA0430 NM_014647

220305_at 2.08 down 1.34 down MGC3260 hypothetical LOC78993

228897_at 2.08 down 1.34 down DERL3 Der1-like domain family, member 3 NM_001002862 /// NM_198440

228723_at 2.14 down 1.34 down CDNA FLJ30445 fis, clone BRACE2009238

239294_at 2.31 down 1.35 down Transcribed locus

208993_s_at 3.01 down 1.35 down PPIG peptidylprolyl isomerase G (cyclophilin G) NM_004792

203264_s_at 2.17 down 1.36 down ARHGEF9 Cdc42 guanine nucleotide exchange factor (GEF) 9 NM_015185

217164_at 2.16 down 1.36 down

218756_s_at 2.12 down 1.36 down MGC4172 short-chain dehydrogenase/reductase NM_024308

228252_at 2.09 down 1.36 down PIF1 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) NM_025049

235782_at 2.52 down 1.36 down Transcribed locus

211969_at 2.13 down 1.37 down HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 NM_001017963 /// NM_005348

215942_s_at 2.01 down 1.37 down GTSE1 G-2 and S-phase expressed 1 NM_016426

227811_at 2.17 down 1.38 down FGD3 FYVE, RhoGEF and PH domain containing 3 NM_001083536 /// NM_033086

210625_s_at 2.35 down 1.38 down AKAP1 A kinase (PRKA) anchor protein 1 NM_003488

210993_s_at 2.24 down 1.38 down SMAD1 SMAD family member 1 NM_001003688 /// NM_005900

224520_s_at 5.02 down 1.39 down BEST3 bestrophin 3 NM_032735 /// NM_152439

Page 2: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697

236090_at 2.16 down 1.39 down Transcribed locus

233642_s_at 2.06 down 1.39 down HEATR5B HEAT repeat containing 5B NM_019024

222305_at 2.08 down 1.39 down HK2 hexokinase 2 NM_000189

214550_s_at 2.60 down 1.40 down TNPO3 transportin 3 NM_012470

222713_s_at 2.03 down 1.40 down FANCF Fanconi anemia, complementation group F NM_022725

242578_x_at 2.83 down 1.40 down SLC22A3 Solute carrier family 22 (extraneuronal monoamine transporter), member 3 NM_021977

222045_s_at 2.23 down 1.41 down PCIF1 PDX1 C-terminal inhibiting factor 1 NM_022104

243560_at 2.54 down 1.42 down Transcribed locus

219949_at 4.30 down 1.42 down LRRC2 leucine rich repeat containing 2 NM_024512 /// NM_024750

203345_s_at 2.28 down 1.42 down MTF2 metal response element binding transcription factor 2 NM_007358

223174_at 2.14 down 1.42 down BTBD10 BTB (POZ) domain containing 10 NM_032320

217807_s_at 2.01 down 1.42 down GLTSCR2 glioma tumor suppressor candidate region gene 2 NM_015710

232682_at 2.06 down 1.42 down MREG melanoregulin NM_018000

242691_at 2.31 down 1.43 down CDNA FLJ41369 fis, clone BRCAN2006117

226413_at 2.05 down 1.43 down LOC400027 hypothetical gene supported by BC047417 XM_001718517 /// XM_931434 /// XM_943193

203725_at 2.08 down 1.43 down GADD45A growth arrest and DNA-damage-inducible, alpha NM_001924

225108_at 2.47 down 1.44 down

229050_s_at 2.11 down 1.44 down SNHG7 small nucleolar RNA host gene (non-protein coding) 7 NR_003672

228167_at 2.01 down 1.44 down KLHL6 kelch-like 6 (Drosophila) NM_130446

1552621_at 2.45 down 1.44 down POLR2J2 DNA directed RNA polymerase II polypeptide J-related NM_032959

239024_at 2.03 down 1.45 down ZNF148 zinc finger protein 148 NM_021964

1558755_x_at 2.66 down 1.45 down ZNF763 zinc finger protein 763 NM_001012753

225330_at 2.20 down 1.45 down IGF1R insulin-like growth factor 1 receptor NM_000875

223487_x_at 2.04 down 1.45 down GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 NM_021629

1552427_at 2.35 down 1.46 down ZNF485 zinc finger protein 485 NM_145312

33646_g_at 2.24 down 1.46 down GM2A GM2 ganglioside activator NM_000405

201737_s_at 2.92 down 1.46 down 7-Mar membrane-associated ring finger (C3HC4) 6 NM_005885

212086_x_at 2.03 down 1.47 down LMNA lamin A/C NM_005572 /// NM_170707 /// NM_170708

220459_at 2.13 down 1.47 down MCM3APAS

minichromosome maintenance complex component 3 associated protein

antisense NR_002776

230178_s_at 2.02 down 1.47 down CDNA FLJ38461 fis, clone FEBRA2020977

209162_s_at 2.03 down 1.47 down PRPF4 PRP4 pre-mRNA processing factor 4 homolog (yeast) NM_004697

238908_at 2.94 down 1.48 down CALU Calumenin NM_001219

205132_at 2.29 down 1.48 down ACTC1 actin, alpha, cardiac muscle 1 NM_005159

217142_at 2.30 down 1.49 down

207983_s_at 2.21 down 1.49 down STAG2 stromal antigen 2

NM_001042749 /// NM_001042750 /// NM_001042751 ///

NM_006603

225640_at 2.15 down 1.49 down LOC401504 hypothetical gene supported by AK091718

241773_at 2.14 down 1.49 down

1553286_at 2.17 down 1.50 down ZNF555 zinc finger protein 555 NM_152791

216606_x_at 2.14 down 1.50 down LYPLA2P1 lysophospholipase II pseudogene 1 NR_001444

64418_at 2.22 down 1.50 down CDNA FLJ34482 fis, clone HLUNG2004067

233483_at 2.20 down 1.50 down TBC1D27 TBC1 domain family, member 27 XR_040581 /// XR_040582 /// XR_040583

231715_s_at 2.29 down 1.50 down PYCR2 pyrroline-5-carboxylate reductase family, member 2 NM_013328

238793_at 2.05 down 1.51 down TIGD7 tigger transposable element derived 7 NM_033208

227069_at 2.69 down 1.51 down CDNA clone IMAGE:4816860

228116_at 2.03 down 1.51 down Clone IMAGE:120162 mRNA sequence

209011_at 2.58 down 1.52 down LOC100131749 /// TRIO

triple functional domain (PTPRF interacting) /// hypothetical protein

LOC100131749

NM_007118 /// XM_001720067 /// XM_001721583 ///

XM_001723929

1553535_a_at 2.23 down 1.52 down RANGAP1 Ran GTPase activating protein 1 NM_002883

206555_s_at 3.22 down 1.52 down THUMPD1 THUMP domain containing 1 NM_017736

1568646_x_at 2.18 down 1.53 down ZNF208 zinc finger protein 208 NM_007153

242293_at 2.03 down 1.53 down ING3 inhibitor of growth family, member 3 NM_019071 /// NM_198267

228549_at 2.07 down 1.53 down TMEM63A Transmembrane protein 63A NM_014698

227536_at 2.84 down 1.53 down ZC3H13 zinc finger CCCH-type containing 13 NM_015070

223498_at 2.21 down 1.53 down SPECC1 sperm antigen with calponin homology and coiled-coil domains 1

NM_001033553 /// NM_001033554 /// NM_001033555 ///

NM_152904

238672_at 2.01 down 1.54 down Transcribed locus

231697_s_at 2.15 down 1.54 down TMEM49 Transmembrane protein 49 NM_030938

204373_s_at 2.07 down 1.55 down CEP350 centrosomal protein 350kDa NM_014810

202221_s_at 2.00 down 1.55 down EP300 E1A binding protein p300 NM_001429

207667_s_at 2.65 down 1.56 down MAP2K3 mitogen-activated protein kinase kinase 3 NM_002756 /// NM_145109

216550_x_at 2.08 down 1.56 down ANKRD12 ankyrin repeat domain 12 NM_001083625 /// NM_015208

214739_at 2.49 down 1.56 down LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 NM_032773

206255_at 2.21 down 1.56 down BLK B lymphoid tyrosine kinase NM_001715

1556144_at 2.13 down 1.56 down DHX30 DEAH (Asp-Glu-Ala-His) box polypeptide 30 NM_014966 /// NM_138615

225657_at 2.12 down 1.56 down LOC152217 hypothetical LOC152217 XR_017713 /// XR_017724 /// XR_040188

208886_at 2.49 down 1.56 down H1F0 H1 histone family, member 0 NM_005318

212251_at 2.90 down 1.57 down MTDH metadherin NM_178812

225332_at 2.36 down 1.58 down LOC729082 Hypothetical protein LOC729082 XR_040992 /// XR_040993 /// XR_040994

227477_at 2.02 down 1.58 down ZMYND19 zinc finger, MYND-type containing 19 NM_138462

225567_at 2.50 down 1.59 down CDNA clone IMAGE:4798730

203658_at 2.01 down 1.59 down SLC25A20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 NM_000387

228408_s_at 2.44 down 1.59 down SDAD1 SDA1 domain containing 1 NM_018115

202548_s_at 2.07 down 1.59 down ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7

NM_001113511 /// NM_001113512 /// NM_001113513 ///

NM_003899 /// NM_145735

38290_at 2.32 down 1.59 down RGS14 regulator of G-protein signaling 14 NM_006480

214711_at 2.72 down 1.60 down GATC glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial) NM_176818

Page 3: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

1554329_x_at 2.44 down 1.60 down STXBP4 syntaxin binding protein 4 NM_178509

1555833_a_at 2.21 down 1.60 down CDNA FLJ38849 fis, clone MESAN2008936

222621_at 2.09 down 1.60 down DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 NM_022365

212239_at 2.00 down 1.60 down PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) NM_181504 /// NM_181523 /// NM_181524

221035_s_at 2.18 down 1.60 down TEX14 testis expressed 14 NM_031272 /// NM_198393

232156_at 2.28 down 1.60 down CDNA: FLJ21268 fis, clone COL01718

222656_at 2.11 down 1.61 down UBE2W ubiquitin-conjugating enzyme E2W (putative) NM_001001481 /// NM_018299

200919_at 2.47 down 1.61 down PHC2 polyhomeotic homolog 2 (Drosophila) NM_004427 /// NM_198040

242346_x_at 2.09 down 1.61 down

222526_at 2.45 down 1.61 down GATAD2A GATA zinc finger domain containing 2A NM_017660

210942_s_at 2.74 down 1.61 down ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 NM_006100

223915_at 2.18 down 1.61 down BCOR BCL6 co-repressor

NM_001123383 /// NM_001123384 /// NM_001123385 ///

NM_017745 /// NM_020926

212295_s_at 2.01 down 1.61 down SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 NM_003045

204771_s_at 2.47 down 1.61 down TTF1 transcription termination factor, RNA polymerase I NM_007344

218240_at 2.21 down 1.62 down NKIRAS2 NFKB inhibitor interacting Ras-like 2 NM_001001349 /// NM_017595

235756_at 3.20 down 1.62 down CDNA FLJ26187 fis, clone ADG04782

203900_at 2.13 down 1.62 down KIAA0467 KIAA0467 NM_015284

221487_s_at 2.71 down 1.62 down ENSA endosulfine alpha

NM_004436 /// NM_207042 /// NM_207043 /// NM_207044 ///

NM_207045 /// NM_207046 /// NM_207047 /// NM_207168

243445_at 2.05 down 1.62 down BNC2 basonuclin 2 NM_017637

244035_at 2.04 down 1.62 down Full length insert cDNA clone YZ11B11

242073_at 2.48 down 1.63 down Transcribed locus

203003_at 2.12 down 1.63 down MEF2D myocyte enhancer factor 2D NM_005920

1556393_at 2.10 down 1.63 down Full length insert cDNA clone YY79F02

241813_at 2.00 down 1.64 down MBD1 methyl-CpG binding domain protein 1

NM_002384 /// NM_015844 /// NM_015845 /// NM_015846 ///

NM_015847

54051_at 2.26 down 1.64 down PKNOX1 PBX/knotted 1 homeobox 1 NM_004571

228129_at 2.67 down 1.64 down SERBP1 SERPINE1 mRNA binding protein 1

NM_001018067 /// NM_001018068 /// NM_001018069 ///

NM_015640

1555241_at 2.30 down 1.64 down C8orf59 chromosome 8 open reading frame 59

NM_001099670 /// NM_001099671 /// NM_001099672 ///

NM_001099673

222910_s_at 2.04 down 1.64 down PEX5L peroxisomal biogenesis factor 5-like NM_016559

228400_at 2.04 down 1.65 down SHROOM3 shroom family member 3 NM_020859

226375_at 2.03 down 1.65 down CDNA clone IMAGE:6584326

217208_s_at 2.18 down 1.66 down DLG1 discs, large homolog 1 (Drosophila) NM_001098424 /// NM_004087

242268_at 2.40 down 1.66 down CUGBP2 CUG triplet repeat, RNA binding protein 2

NM_001025076 /// NM_001025077 /// NM_001083591 ///

NM_006561

1554365_a_at 2.00 down 1.67 down PPP2R5C protein phosphatase 2, regulatory subunit B', gamma isoform NM_002719 /// NM_178586 /// NM_178587 /// NM_178588

230738_at 2.19 down 1.67 down LOC730631 Hypothetical LOC730631 XM_001715137 /// XM_001720519 /// XM_001723714

211913_s_at 2.07 down 1.67 down MERTK c-mer proto-oncogene tyrosine kinase NM_006343

1555526_a_at 3.21 down 1.67 down 7-Sep septin 6 NM_015129 /// NM_145799 /// NM_145800 /// NM_145802

225805_at 2.09 down 1.67 down HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) NM_004501 /// NM_031844

231124_x_at 2.03 down 1.67 down LY9 lymphocyte antigen 9 NM_001033667 /// NM_002348

244766_at 2.07 down 1.68 down

LOC440345 ///

LOC440354 ///

LOC595101 ///

LOC641298 ///

LOC728423 ///

LOC729513 /// SMG1

PI-3-kinase-related kinase SMG-1 /// hypothetical protein LOC440345 /// PI-3-

kinase-related kinase SMG-1 pseudogene /// hypothetical LOC728423 /// similar

to PI-3-kinase-related kinase SMG-1

NM_015092 /// NR_002453 /// NR_002473 /// XR_015571 ///

XR_015617 /// XR_015786 /// XR_015792 /// XR_039881 ///

XR_041850 /// XR_042165

205882_x_at 2.18 down 1.68 down ADD3 adducin 3 (gamma) NM_001121 /// NM_016824 /// NM_019903

212345_s_at 2.08 down 1.68 down CREB3L2 cAMP responsive element binding protein 3-like 2 NM_194071

211721_s_at 2.20 down 1.68 down ZNF551 zinc finger protein 551 NM_138347

224962_at 2.13 down 1.69 down C9orf69 chromosome 9 open reading frame 69 NM_152833

205169_at 2.02 down 1.69 down RBBP5 retinoblastoma binding protein 5 NM_005057

210078_s_at 2.39 down 1.69 down KCNAB1 potassium voltage-gated channel, shaker-related subfamily, beta member 1 NM_003471 /// NM_172159 /// NM_172160

227693_at 2.12 down 1.70 down WDR20 WD repeat domain 20 NM_144574 /// NM_181291 /// NM_181302 /// NM_181308

223134_at 2.03 down 1.70 down BBX bobby sox homolog (Drosophila) NM_020235

226176_s_at 2.27 down 1.70 down USP42 ubiquitin specific peptidase 42 NM_032172

213355_at 2.47 down 1.71 down ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 NM_006100

212108_at 2.41 down 1.71 down UBXD8 UBX domain containing 8 NM_014613

202724_s_at 2.17 down 1.71 down FOXO1 forkhead box O1 NM_002015

1569132_s_at 2.46 down 1.72 down ARSK Arylsulfatase family, member K NM_198150

221797_at 2.40 down 1.72 down C17orf90 chromosome 17 open reading frame 90 NM_001039842

201183_s_at 2.20 down 1.72 down CHD4 chromodomain helicase DNA binding protein 4 NM_001273

243046_at 4.17 down 1.73 down MRNA; cDNA DKFZp564H0616 (from clone DKFZp564H0616)

226434_at 2.02 down 1.73 down C7orf47 chromosome 7 open reading frame 47 NM_145030

222858_s_at 2.04 down 1.73 down DAPP1 dual adaptor of phosphotyrosine and 3-phosphoinositides NM_014395

208994_s_at 2.41 down 1.73 down PPIG peptidylprolyl isomerase G (cyclophilin G) NM_004792

218951_s_at 2.10 down 1.73 down PLCXD1 phosphatidylinositol-specific phospholipase C, X domain containing 1 NM_018390

212596_s_at 2.12 down 1.74 down HMG2L1 high-mobility group protein 2-like 1 NM_001003681 /// NM_005487 /// NM_014250

1554875_at 2.18 down 1.74 down C2orf34 chromosome 2 open reading frame 34 NM_024766

209489_at 2.67 down 1.74 down CUGBP1 CUG triplet repeat, RNA binding protein 1 NM_001025596 /// NM_006560 /// NM_198700

228287_at 2.08 down 1.74 down ING5 /// LOC727773 inhibitor of growth family, member 5 /// similar to p28 ING5 NM_032329 /// XM_001126273

1554021_a_at 2.53 down 1.74 down ZNF12 zinc finger protein 12 NM_006956 /// NM_016265

229595_at 2.10 down 1.74 down CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4 NM_001098502 /// NM_144636

222529_at 2.30 down 1.74 down SLC25A37 solute carrier family 25, member 37 NM_016612

Page 4: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

239735_at 2.27 down 1.74 down MRNA (fetal brain cDNA g6_1g)

223189_x_at 2.11 down 1.74 down MLL5 myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila) NM_018682 /// NM_182931

200914_x_at 2.46 down 1.74 down KTN1 kinectin 1 (kinesin receptor)

NM_001079521 /// NM_001079522 /// NM_004986 ///

NM_182926

238593_at 2.14 down 1.74 down C11orf80 chromosome 11 open reading frame 80 NM_024650

211471_s_at 2.12 down 1.75 down RAB36 RAB36, member RAS oncogene family NM_004914

235207_at 2.03 down 1.75 down Transcribed locus

1552263_at 2.06 down 1.75 down MAPK1 mitogen-activated protein kinase 1 NM_002745 /// NM_138957

206593_s_at 2.23 down 1.75 down MED22 mediator complex subunit 22 NM_133640 /// NM_181491

226357_at 2.41 down 1.75 down USP19 ubiquitin specific peptidase 19 NM_006677

235030_at 2.09 down 1.75 down FAM55C family with sequence similarity 55, member C NM_145037

1555886_at 2.08 down 1.75 down PDSS2 prenyl (decaprenyl) diphosphate synthase, subunit 2 NM_020381

201896_s_at 2.02 down 1.76 down PSRC1 proline/serine-rich coiled-coil 1

NM_001005290 /// NM_001032290 /// NM_001032291 ///

NM_032636

226386_at 2.22 down 1.76 down C7orf30 chromosome 7 open reading frame 30 NM_138446

222244_s_at 2.41 down 1.76 down TUG1 taurine upregulated gene 1 NR_002323

243996_at 3.07 down 1.76 down Transcribed locus

226385_s_at 2.06 down 1.77 down C7orf30 chromosome 7 open reading frame 30 NM_138446

204962_s_at 2.19 down 1.77 down CENPA centromere protein A NM_001042426 /// NM_001809

242255_at 2.08 down 1.77 down LOC100130837 Hypothetical protein LOC100130837 XM_001717688 /// XM_001720700 /// XM_001724535

203061_s_at 2.79 down 1.78 down MDC1 mediator of DNA damage checkpoint 1 NM_014641

209486_at 2.10 down 1.78 down UTP3 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) NM_020368

206364_at 2.08 down 1.78 down KIF14 kinesin family member 14 NM_014875

215054_at 2.75 down 1.79 down EPOR erythropoietin receptor NM_000121

227527_at 2.08 down 1.79 down MLL2 myeloid/lymphoid or mixed-lineage leukemia 2 NM_003482

241721_at 2.60 down 1.79 down CDNA FLJ37844 fis, clone BRSSN2012622

222558_at 2.10 down 1.79 down P15RS cyclin-dependent kinase 2B-inhibitor-related protein NM_018170

201747_s_at 3.04 down 1.79 down SAFB scaffold attachment factor B NM_002967

229513_at 2.29 down 1.80 down STRBP Chromosome 9 open reading frame 45 NM_018387

217693_x_at 2.13 down 1.80 down MAGOH2 mago-nashi homolog 2, proliferation-associated (Drosophila)

201986_at 2.04 down 1.80 down MED13 mediator complex subunit 13 NM_005121

242735_x_at 2.13 down 1.80 down ELF2 E74-like factor 2 (ets domain transcription factor) NM_006874 /// NM_201999

44790_s_at 2.36 down 1.81 down C13orf18 /// LOC728970 chromosome 13 open reading frame 18 /// hypothetical LOC728970

NM_025113 /// XM_001132115 /// XM_001133896 ///

XM_001720155

214722_at 2.01 down 1.81 down NOTCH2NL Notch homolog 2 (Drosophila) N-terminal like NM_203458

223814_at 2.58 down 1.81 down TRNT1 tRNA nucleotidyl transferase, CCA-adding, 1 NM_182916

230739_at 2.04 down 1.81 down C18orf19 chromosome 18 open reading frame 19 NM_001098801 /// NM_152352

202830_s_at 2.30 down 1.81 down SLC37A4 solute carrier family 37 (glucose-6-phosphate transporter), member 4 NM_001467

211752_s_at 2.04 down 1.81 down NDUFS7

NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q

reductase) NM_024407

223167_s_at 2.54 down 1.81 down USP25 ubiquitin specific peptidase 25 NM_013396

1552310_at 2.29 down 1.81 down C15orf40 chromosome 15 open reading frame 40 NM_144597

65133_i_at 2.70 down 1.81 down WBP1 /// ZNHIT4 WW domain binding protein 1 /// zinc finger, HIT type 4 NM_012477 /// NM_031288

1553247_a_at 2.79 down 1.81 down ZNF564 /// ZNF709 zinc finger protein 564 /// zinc finger protein 709 NM_144976 /// NM_152601

224975_at 2.13 down 1.82 down NFIA nuclear factor I/A NM_005595

203245_s_at 2.29 down 1.82 down FLJ35348 FLJ35348 XR_041460 /// XR_041461 /// XR_041462

238972_at 3.14 down 1.82 down Transcribed locus

227116_at 2.32 down 1.83 down Transcribed locus

201337_s_at 2.03 down 1.83 down VAMP3 vesicle-associated membrane protein 3 (cellubrevin) NM_004781

203985_at 2.11 down 1.83 down ZNF212 zinc finger protein 212 NM_012256

227580_s_at 2.75 down 1.83 down DKFZP434B0335 DKFZP434B0335 protein NM_015395

236780_at 2.66 down 1.84 down Transcribed locus

237333_at 2.06 down 1.84 down SYNC1 Syncoilin, intermediate filament 1 NM_030786

209687_at 2.04 down 1.84 down CXCL12 chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) NM_000609 /// NM_001033886 /// NM_199168

201987_at 2.03 down 1.84 down MED13 mediator complex subunit 13 NM_005121

201671_x_at 2.30 down 1.84 down USP14 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) NM_001037334 /// NM_005151

223034_s_at 2.09 down 1.84 down C1orf43 chromosome 1 open reading frame 43 NM_001098616 /// NM_015449 /// NM_138740

216563_at 2.26 down 1.84 down ANKRD12 Ankyrin repeat domain 12 NM_001083625 /// NM_015208

1558236_at 2.06 down 1.85 down

209703_x_at 2.59 down 1.85 down METTL7A methyltransferase like 7A NM_014033

233334_x_at 2.17 down 1.85 down

GIYD1 /// GIYD2 ///

SULT1A3 /// SULT1A4

sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3 /// GIY-YIG

domain containing 2 /// sulfotransferase family, cytosolic, 1A, phenol-preferring,

member 4 /// GIY-YIG domain containing 1

NM_001014999 /// NM_001015000 /// NM_001017387 ///

NM_001017389 /// NM_001017390 /// NM_001017391 ///

NM_003166 /// NM_024044 /// NM_177552 /// NM_178044

212075_s_at 2.17 down 1.85 down CSNK2A1 casein kinase 2, alpha 1 polypeptide NM_001895 /// NM_177559 /// NM_177560

226059_at 2.52 down 1.85 down TOMM40L translocase of outer mitochondrial membrane 40 homolog (yeast)-like NM_032174

201953_at 2.08 down 1.85 down CIB1 calcium and integrin binding 1 (calmyrin) NM_006384

218401_s_at 2.02 down 1.85 down ZNF281 zinc finger protein 281 NM_012482

222907_x_at 2.03 down 1.85 down TMEM50B transmembrane protein 50B NM_006134

212520_s_at 3.30 down 1.86 down SMARCA4

SWI/SNF related, matrix associated, actin dependent regulator of chromatin,

subfamily a, member 4 NM_003072

227946_at 2.38 down 1.86 down OSBPL7 oxysterol binding protein-like 7 NM_145798

241893_at 2.67 down 1.86 down Transcribed locus

241982_at 2.30 down 1.87 down Transcribed locus

218006_s_at 2.52 down 1.87 down ZNF22 zinc finger protein 22 (KOX 15) NM_006963

219471_at 2.02 down 1.88 down C13orf18 /// LOC728970 chromosome 13 open reading frame 18 /// hypothetical LOC728970

NM_025113 /// XM_001132115 /// XM_001133896 ///

XM_001720155

225852_at 2.47 down 1.88 down ANKRD17 ankyrin repeat domain 17 NM_032217 /// NM_198889

Page 5: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

213470_s_at 2.07 down 1.88 down HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) NM_005520

242304_at 2.27 down 1.88 down WIBG within bgcn homolog (Drosophila) NM_032345

210260_s_at 2.25 down 1.88 down TNFAIP8 tumor necrosis factor, alpha-induced protein 8 NM_001077654 /// NM_014350

212318_at 3.20 down 1.88 down TNPO3 transportin 3 NM_012470

213682_at 2.14 down 1.89 down NUP50 nucleoporin 50kDa NM_007172 /// NM_153645

226998_at 2.06 down 1.89 down NARG1 NMDA receptor regulated 1 NM_057175

205449_at 2.62 down 1.89 down SAC3D1 SAC3 domain containing 1 NM_013299

232493_at 2.14 down 1.89 down Transcribed locus

208726_s_at 2.25 down 1.89 down EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa NM_003908

201697_s_at 2.42 down 1.89 down DNMT1 DNA (cytosine-5-)-methyltransferase 1 NM_001379

209123_at 2.08 down 1.90 down QDPR quinoid dihydropteridine reductase NM_000320

225641_at 2.53 down 1.90 down MEF2D myocyte enhancer factor 2D NM_005920

242787_at 2.39 down 1.90 down Transcribed locus

242837_at 2.12 down 1.90 down SFRS4 Splicing factor, arginine/serine-rich 4 NM_005626

226684_at 2.71 down 1.91 down ATG2B ATG2 autophagy related 2 homolog B (S. cerevisiae) NM_018036

235931_at 2.20 down 1.91 down Transcribed locus

63825_at 2.09 down 1.92 down ABHD2 abhydrolase domain containing 2 NM_007011 /// NM_152924

202031_s_at 2.42 down 1.92 down WIPI2 WD repeat domain, phosphoinositide interacting 2

NM_001033518 /// NM_001033519 /// NM_001033520 ///

NM_015610 /// NM_016003

224755_at 2.58 down 1.92 down Transcribed locus

211930_at 2.09 down 1.93 down HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 NM_194247

214773_x_at 2.04 down 1.93 down TIPRL TIP41, TOR signaling pathway regulator-like (S. cerevisiae) NM_001031800 /// NM_152902

201141_at 2.62 down 1.93 down GPNMB glycoprotein (transmembrane) nmb NM_001005340 /// NM_002510

242751_at 3.05 down 1.93 down Transcribed locus

235603_at 2.14 down 1.93 down HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) NM_004501 /// NM_031844

1552660_a_at 2.15 down 1.93 down C5orf22 chromosome 5 open reading frame 22 NM_018356

203825_at 2.58 down 1.93 down BRD3 bromodomain containing 3 NM_007371

221522_at 2.24 down 1.93 down ANKRD27 ankyrin repeat domain 27 (VPS9 domain) NM_032139

226771_at 2.13 down 1.94 down ATP8B2 ATPase, class I, type 8B, member 2 NM_001005855 /// NM_020452

203574_at 2.16 down 1.94 down NFIL3 nuclear factor, interleukin 3 regulated NM_005384

222559_s_at 2.09 down 1.94 down P15RS cyclin-dependent kinase 2B-inhibitor-related protein NM_018170

227696_at 2.08 down 1.94 down EXOSC6 exosome component 6 NM_058219

218301_at 2.34 down 1.94 down RNPEPL1 arginyl aminopeptidase (aminopeptidase B)-like 1 NM_018226

204976_s_at 2.21 down 1.94 down AMMECR1

Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis

chromosomal region, gene 1 NM_001025580 /// NM_015365

205260_s_at 2.46 down 1.94 down ACYP1 /// C17orf13

acylphosphatase 1, erythrocyte (common) type /// chromosome 17 open

reading frame 13 NM_001107 /// NM_203488

228620_at 2.10 down 1.94 down CDNA FLJ46701 fis, clone TRACH3014063

235381_at 2.87 down 1.95 down Homo sapiens, clone IMAGE:3457110, mRNA

89948_at 2.23 down 1.95 down PCIF1 PDX1 C-terminal inhibiting factor 1 NM_022104

228964_at 2.53 down 1.95 down PRDM1 PR domain containing 1, with ZNF domain NM_001198 /// NM_182907

203323_at 2.81 down 1.95 down CAV2 caveolin 2 NM_001233 /// NM_198212

230701_x_at 2.55 down 1.96 down KIF9 kinesin family member 9 NM_022342 /// NM_182902 /// NM_182903

208785_s_at 2.26 down 1.96 down MAP1LC3B microtubule-associated protein 1 light chain 3 beta NM_022818

235745_at 2.06 down 1.96 down ERN1 endoplasmic reticulum to nucleus signaling 1 NM_001433

230098_at 2.05 down 1.97 down PHF20L1 PHD finger protein 20-like 1 NM_016018 /// NM_032205 /// NM_198513

223666_at 2.70 down 1.97 down SNX5 sorting nexin 5 NM_014426 /// NM_152227

224795_x_at 2.06 down 1.97 down IGK@ /// IGKC immunoglobulin kappa constant /// immunoglobulin kappa locus

209084_s_at 2.02 down 1.97 down RAB28 RAB28, member RAS oncogene family NM_001017979 /// NM_004249

208744_x_at 2.13 down 1.97 down HSPH1 heat shock 105kDa/110kDa protein 1 NM_006644

205945_at 3.42 down 1.97 down IL6R interleukin 6 receptor NM_000565 /// NM_181359

201841_s_at 2.34 down 1.97 down HSPB1 heat shock 27kDa protein 1 NM_001540

227968_at 2.23 down 1.98 down PDDC1 Parkinson disease 7 domain containing 1 NM_182612

235428_at 2.11 down 1.98 down

Transcribed locus, strongly similar to NP_001027392.1 syntaxin binding protein

1 isoform b [Homo sapiens]

235146_at 2.07 down 1.98 down Transcribed locus

224889_at 2.95 down 1.98 down FOXO3 forkhead box O3 NM_001455 /// NM_201559

218507_at 2.65 down 1.98 down HIG2 hypoxia-inducible protein 2 NM_001098786 /// NM_013332

224063_at 2.65 down 1.98 down NLN neurolysin (metallopeptidase M3 family) NM_020726

1554887_at 2.21 down 1.98 down

240592_at 2.46 down 1.98 down LCORL ligand dependent nuclear receptor corepressor-like NM_153686

227620_at 2.30 down 1.98 down SLC44A1 solute carrier family 44, member 1 NM_080546

230165_at 2.23 down 1.99 down SGOL2 shugoshin-like 2 (S. pombe) NM_152524

217823_s_at 2.07 down 1.99 down UBE2J1 ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast) NM_016021

212987_at 2.00 down 1.99 down FBXO9 F-box protein 9 NM_012347 /// NM_033480 /// NM_033481

203023_at 2.26 down 1.99 down HSPC111 hypothetical protein HSPC111 NM_016391

226105_at 2.53 down 1.99 down Transcribed locus

225902_at 3.21 down 1.99 down CDNA FLJ42968 fis, clone BRSTN2016954

1553984_s_at 2.26 down 1.99 down DTYMK /// LOC727761

deoxythymidylate kinase (thymidylate kinase) /// similar to Deoxythymidylate

kinase (thymidylate kinase)

NM_012145 /// XM_001126163 /// XM_001126184 ///

XM_001126211

224744_at 2.15 down 2.00 down IMPAD1 inositol monophosphatase domain containing 1 NM_017813

227346_at 2.33 down 2.00 down IKZF1 IKAROS family zinc finger 1 (Ikaros) NM_006060

232338_at 2.23 down 2.00 down CDNA FLJ11553 fis, clone HEMBA1003034

224647_at 1.40 down 2.00 down CCNY cyclin Y NM_145012 /// NM_181698

224617_at 2.03 down 2.00 down ROD1 ROD1 regulator of differentiation 1 (S. pombe) NM_005156

242201_at 1.80 down 2.00 down PMS2L5 Postmeiotic segregation increased 2-like 5 NM_174930 /// XM_001713820

241734_at 1.25 down 2.01 down SRFBP1 serum response factor binding protein 1 NM_152546

200767_s_at 1.58 down 2.01 down FAM120A family with sequence similarity 120A NM_014612

219688_at 1.01 down 2.01 down BBS7 Bardet-Biedl syndrome 7 NM_018190 /// NM_176824

Page 6: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

229733_s_at 1.35 down 2.01 down Transcribed locus

226212_s_at 1.40 down 2.01 down INSR insulin receptor NM_000208 /// NM_001079817

208648_at 2.13 down 2.01 down VCP valosin-containing protein NM_007126

214913_at 2.67 down 2.01 down ADAMTS3 ADAM metallopeptidase with thrombospondin type 1 motif, 3 NM_014243

226265_at 1.80 down 2.01 down QSER1 glutamine and serine rich 1 NM_001076786

223356_s_at 2.27 down 2.01 down MTIF3 mitochondrial translational initiation factor 3 NM_152912

1564494_s_at 1.98 down 2.01 down P4HB

procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), beta

polypeptide NM_000918

208296_x_at 1.77 down 2.01 down TNFAIP8 tumor necrosis factor, alpha-induced protein 8 NM_001077654 /// NM_014350

225457_s_at 2.74 down 2.01 down LOC25845 hypothetical LOC25845 XR_017708 /// XR_017745 /// XR_040817

221727_at 1.57 down 2.01 down SUB1 SUB1 homolog (S. cerevisiae) NM_006713

203270_at 1.87 down 2.01 down DTYMK /// LOC727761

deoxythymidylate kinase (thymidylate kinase) /// similar to Deoxythymidylate

kinase (thymidylate kinase)

NM_012145 /// XM_001126163 /// XM_001126184 ///

XM_001126211

230005_at 1.75 down 2.01 down SVIP small VCP/p97-interacting protein NM_148893

225047_at 1.66 down 2.02 down NUPL1 nucleoporin like 1 NM_001008564 /// NM_001008565 /// NM_014089

228963_at 1.85 down 2.02 down RSBN1L Round spermatid basic protein 1-like NM_198467

213002_at 2.60 down 2.02 down MARCKS myristoylated alanine-rich protein kinase C substrate NM_002356

244660_at 1.17 down 2.02 down ELAVL1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) NM_001419

238510_at 1.53 down 2.02 down ZNF720 zinc finger protein 720 NM_001004300

212289_at 2.24 down 2.02 down ANKRD12 ankyrin repeat domain 12 NM_001083625 /// NM_015208

1565567_at 1.17 down 2.02 down Full length insert cDNA YN68A11

203349_s_at 2.25 down 2.02 down ETV5 ets variant gene 5 (ets-related molecule) NM_004454

202818_s_at 1.30 down 2.02 down TCEB3 transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A) NM_003198

1560402_at 1.69 down 2.02 down GAS5 growth arrest-specific 5 NR_002578

230336_at 1.94 down 2.02 down Transcribed locus

235585_at 1.60 down 2.02 down Transcribed locus

235233_s_at 1.70 down 2.02 down GMEB1 glucocorticoid modulatory element binding protein 1 NM_006582 /// NM_024482

240344_x_at 2.69 down 2.02 down LYRM7 Lyrm7 homolog (mouse) NM_181705

223046_at 2.07 down 2.02 down EGLN1 egl nine homolog 1 (C. elegans) NM_022051

228680_at 2.23 down 2.02 down KIF3A kinesin family member 3A NM_007054

227669_at 1.85 down 2.03 down BRP44 brain protein 44 NM_015415

60794_f_at 1.61 down 2.03 down LOC730051 similar to hCG2044798 XM_001725674 /// XM_001725708 /// XM_001726286

214220_s_at 1.77 down 2.03 down ALMS1 Alstrom syndrome 1 NM_015120

209681_at 2.12 down 2.03 down SLC19A2 solute carrier family 19 (thiamine transporter), member 2 NM_006996

227692_at 1.91 down 2.03 down GNAI1

guanine nucleotide binding protein (G protein), alpha inhibiting activity

polypeptide 1 NM_002069

213233_s_at 1.42 down 2.03 down KLHL9 kelch-like 9 (Drosophila) NM_018847

229490_s_at 1.16 down 2.03 down Transcribed locus

227767_at 1.54 down 2.03 down CSNK1G3 casein kinase 1, gamma 3

NM_001031812 /// NM_001044722 /// NM_001044723 ///

NM_004384

202526_at 1.29 down 2.03 down SMAD4 SMAD family member 4 NM_005359

238622_at 1.58 down 2.03 down RAP2B RAP2B, member of RAS oncogene family NM_002886

226045_at 2.00 down 2.03 down FRS2 fibroblast growth factor receptor substrate 2 NM_001042555 /// NM_006654

242323_at 1.52 down 2.03 down Transcribed locus

225368_at 1.95 down 2.03 down HIPK2 homeodomain interacting protein kinase 2 NM_001113239 /// NM_022740

212631_at 2.17 down 2.04 down STX7 syntaxin 7 NM_003569

1554455_at 1.87 down 2.04 down LINS1 lines homolog 1 (Drosophila)

NM_001040614 /// NM_001040615 /// NM_001040616 ///

NM_018148

208920_at 1.48 down 2.04 down SRI sorcin NM_003130 /// NM_198901

227132_at 1.31 down 2.04 down ZNF706 zinc finger protein 706 NM_001042510 /// NM_001042511 /// NM_016096

224698_at 1.25 down 2.04 down FAM62B family with sequence similarity 62 (C2 domain containing) member B NM_020728

78383_at 1.97 down 2.04 down LOC100129250 similar to hCG1811779 XM_001722063 /// XM_001723459 /// XM_001725563

228023_x_at 1.79 down 2.04 down AMY2B amylase, alpha 2B (pancreatic) NM_020978

1570623_at 1.74 down 2.04 down

215532_x_at 1.67 down 2.04 down ZNF492 zinc finger protein 492 NM_020855

1558747_at 1.52 down 2.05 down SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 NM_015295

229410_at 2.15 down 2.05 down SLC35E1 solute carrier family 35, member E1 NM_024881

204215_at 2.22 down 2.05 down C7orf23 chromosome 7 open reading frame 23 NM_024315

238960_s_at 1.68 down 2.05 down LARP4 La ribonucleoprotein domain family, member 4 NM_052879 /// NM_199188 /// NM_199190

225490_at 2.70 down 2.05 down ARID2 AT rich interactive domain 2 (ARID, RFX-like) NM_152641

230782_at 1.29 down 2.05 down SORD sorbitol dehydrogenase NM_003104

242149_at 1.81 down 2.05 down C18orf19 chromosome 18 open reading frame 19 NM_001098801 /// NM_152352

213848_at 1.92 down 2.05 down MRNA; cDNA DKFZp586F2224 (from clone DKFZp586F2224)

207365_x_at 1.98 down 2.05 down USP34 ubiquitin specific peptidase 34 NM_014709

1554264_at 2.10 down 2.06 down CKAP2 cytoskeleton associated protein 2 NM_001098525 /// NM_018204

238443_at 1.67 down 2.06 down Transcribed locus

222685_at 1.57 down 2.06 down FAM29A family with sequence similarity 29, member A NM_017645

221480_at 1.48 down 2.06 down HNRNPD

heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding

protein 1, 37kDa)

NM_001003810 /// NM_002138 /// NM_031369 ///

NM_031370

228777_at 1.37 down 2.06 down KBTBD3 kelch repeat and BTB (POZ) domain containing 3 NM_152433 /// NM_198439

208783_s_at 1.66 down 2.06 down CD46 CD46 molecule, complement regulatory protein

NM_002389 /// NM_153826 /// NM_172350 /// NM_172351 ///

NM_172352 /// NM_172353 /// NM_172354 /// NM_172355 ///

NM_172356 /// NM_172357 /// NM_172358 /// NM_172359 ///

NM_172360 /// NM_172361

224977_at 2.05 down 2.06 down C6orf89 chromosome 6 open reading frame 89 NM_152734

228225_at 1.14 down 2.06 down PXMP3 peroxisomal membrane protein 3, 35kDa (Zellweger syndrome) NM_000318 /// NM_001079867

238992_at 3.26 down 2.06 down POLI polymerase (DNA directed) iota NM_007195

229240_at 1.58 down 2.06 down ZDHHC21 Zinc finger, DHHC-type containing 21 NM_178566

241881_at 1.51 down 2.06 down OR2W3 olfactory receptor, family 2, subfamily W, member 3 NM_001001957

Page 7: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

211929_at 1.52 down 2.06 down HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 NM_194247

200731_s_at 1.24 down 2.06 down PTP4A1 protein tyrosine phosphatase type IVA, member 1 NM_003463

244763_at 1.16 down 2.06 down MTRF1 mitochondrial translational release factor 1 NM_004294

235767_x_at 1.41 down 2.07 down Full length insert cDNA clone ZD82B02

226721_at 2.28 down 2.07 down DPY19L4 dpy-19-like 4 (C. elegans) NM_181787

224820_at 1.74 down 2.07 down FAM36A family with sequence similarity 36, member A NM_198076

200953_s_at 2.13 down 2.07 down CCND2 cyclin D2 NM_001759

226897_s_at 1.86 down 2.07 down ZC3H7A zinc finger CCCH-type containing 7A NM_014153

1557562_at 1.80 down 2.07 down GRIPAP1 GRIP1 associated protein 1 NM_020137 /// NM_207672

211935_at 1.95 down 2.07 down ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 NM_015161

203062_s_at 2.41 down 2.07 down MDC1 mediator of DNA damage checkpoint 1 NM_014641

242887_at 1.12 down 2.07 down KCMF1 potassium channel modulatory factor 1 NM_020122

1566324_a_at 3.51 down 2.07 down MAF v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) NM_001031804 /// NM_005360

224486_s_at 1.24 down 2.07 down C15orf41 chromosome 15 open reading frame 41 NM_032499

1554670_at 2.53 down 2.07 down GGA1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 NM_001001560 /// NM_001001561 /// NM_013365

243888_at 2.17 down 2.07 down Transcribed locus

225546_at 1.60 down 2.07 down EEF2K eukaryotic elongation factor-2 kinase NM_013302

225426_at 1.48 down 2.07 down PPP6C protein phosphatase 6, catalytic subunit NM_001123355 /// NM_001123369 /// NM_002721

230386_at 1.76 down 2.07 down Transcribed locus

227026_at 1.62 down 2.08 down MPHOSPH8 M-phase phosphoprotein 8 NM_017520

205763_s_at 1.70 down 2.08 down DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 NM_006773

226502_at 2.34 down 2.08 down ELMOD2 ELMO/CED-12 domain containing 2 NM_153702

206809_s_at 1.64 down 2.08 down

HNRNPA3 ///

HNRNPA3P1

heterogeneous nuclear ribonucleoprotein A3 pseudogene 1 /// heterogeneous

nuclear ribonucleoprotein A3 NM_194247 /// NR_002726

227869_at 1.82 down 2.08 down FAM104B family with sequence similarity 104, member B NM_138362

1555325_s_at 1.41 down 2.08 down ZNF26 zinc finger protein 26 NM_019591

213305_s_at 2.53 down 2.08 down PPP2R5C protein phosphatase 2, regulatory subunit B', gamma isoform NM_002719 /// NM_178586 /// NM_178587 /// NM_178588

228038_at 2.63 down 2.08 down SOX2 SRY (sex determining region Y)-box 2 NM_003106

206640_x_at 1.63 down 2.08 down

GAGE12B /// GAGE12C

/// GAGE12D ///

GAGE12E /// GAGE12F

/// GAGE12G ///

GAGE12H /// GAGE12I

/// GAGE12J /// GAGE13

/// GAGE2A /// GAGE2B

/// GAGE2C /// GAGE2E

/// GAGE4 /// GAGE5 ///

GAGE6 /// GAGE7

G antigen 2C /// G antigen 4 /// G antigen 5 /// G antigen 6 /// G antigen 7 /// G

antigen 12I /// G antigen 2E /// G antigen 2B /// G antigen 13 /// G antigen 12G

/// G antigen 12J /// G antigen 12C /// G antigen 12B /// G antigen 12E /// G

antigen 12H /// G antigen 2A /// G antigen 12F /// G antigen 12D

NM_001085441 /// NM_001098405 /// NM_001098406 ///

NM_001098408 /// NM_001098409 /// NM_001098410 ///

NM_001098411 /// NM_001098418 /// NM_001127199 ///

NM_001127200 /// NM_001127212 /// NM_001472 ///

NM_001474 /// NM_001475 /// NM_001476 /// NM_001477 ///

NM_021123 /// XM_001130991 /// XM_001713660 ///

XM_001720189

226170_at 1.89 down 2.08 down EYA3 eyes absent homolog 3 (Drosophila) NM_001990

226023_at 2.05 down 2.08 down MAP2K7 mitogen-activated protein kinase kinase 7 NM_145185

222633_at 2.07 down 2.08 down TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 NM_024665

203909_at 2.07 down 2.08 down SLC9A6 solute carrier family 9 (sodium/hydrogen exchanger), member 6 NM_001042537 /// NM_006359

226628_at 1.61 down 2.08 down THOC2 THO complex 2 NM_001081550 /// NM_020449

236146_at 1.40 down 2.09 down SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein NM_006372

208819_at 2.08 down 2.09 down RAB8A RAB8A, member RAS oncogene family NM_005370

226381_at 1.58 down 2.09 down PS1TP4 HBV preS1-transactivated protein 4

241756_at 1.00 down 2.09 down CDNA FLJ30650 fis, clone CTONG2006666

221703_at 1.06 down 2.09 down BRIP1 BRCA1 interacting protein C-terminal helicase 1 NM_032043

227852_at 2.60 down 2.09 down RP9 retinitis pigmentosa 9 (autosomal dominant) NM_203288

239960_x_at 1.73 down 2.09 down LYRM7 Lyrm7 homolog (mouse) NM_181705

225942_at 2.66 down 2.09 down NLN neurolysin (metallopeptidase M3 family) NM_020726

213262_at 1.92 down 2.09 down SACS spastic ataxia of Charlevoix-Saguenay (sacsin) NM_014363

230645_at 2.30 down 2.09 down FRMD3 FERM domain containing 3 NM_174938

230696_at 1.15 down 2.09 down Transcribed locus

208549_x_at 1.94 down 2.09 down PTMAP7 prothymosin, alpha pseudogene 7

201883_s_at 1.33 down 2.09 down B4GALT1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 NM_001497

238756_at 1.19 down 2.09 down GAS2L3 Growth arrest-specific 2 like 3 NM_174942

209662_at 1.83 down 2.09 down CETN3 centrin, EF-hand protein, 3 (CDC31 homolog, yeast) NM_004365

237400_at 1.56 down 2.09 down ATP5S ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s (factor B) NM_001003803 /// NM_001003805 /// NM_015684

213605_s_at 1.93 down 2.09 down

LOC100134282 ///

LOC100134401 hypothetical protein LOC100134282 /// hypothetical protein LOC100134401 XM_001717368 /// XM_001717374

204531_s_at 1.88 down 2.09 down BRCA1 breast cancer 1, early onset

NM_007294 /// NM_007295 /// NM_007296 /// NM_007297 ///

NM_007298 /// NM_007299 /// NM_007300 /// NM_007302 ///

NM_007303 /// NM_007304 /// NM_007305

225008_at 1.11 down 2.10 down CDNA FLJ39064 fis, clone NT2RP7014583

235625_at 1.25 down 2.10 down VPS41 vacuolar protein sorting 41 homolog (S. cerevisiae) NM_014396 /// NM_080631

238494_at 1.15 down 2.10 down TRAF3IP1 TNF receptor-associated factor 3 interacting protein 1 NM_015650

211047_x_at 2.43 down 2.10 down AP2S1 adaptor-related protein complex 2, sigma 1 subunit NM_004069 /// NM_021575

228760_at 1.55 down 2.10 down SFRS2B splicing factor, arginine/serine-rich 2B NM_032102

244803_at 2.51 down 2.10 down Transcribed locus

239355_at 1.69 down 2.10 down Transcribed locus

221643_s_at 1.20 down 2.11 down RERE arginine-glutamic acid dipeptide (RE) repeats NM_001042681 /// NM_001042682 /// NM_012102

224837_at 1.74 down 2.11 down FOXP1 forkhead box P1 NM_001012505 /// NM_032682

234111_at 1.70 down 2.11 down CDNA: FLJ23063 fis, clone LNG04745

238537_at 1.94 down 2.11 down Transcribed locus

Page 8: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

201807_at 1.65 down 2.11 down VPS26A vacuolar protein sorting 26 homolog A (S. pombe) NM_001035260 /// NM_004896

225834_at 1.96 down 2.11 down

FAM72A /// FAM72B ///

FAM72D /// GCUD2

gastric cancer up-regulated-2 /// family with sequence similarity 72, member B

/// family with sequence similarity 72, member D /// family with sequence

similarity 72, member A

NM_001100910 /// NM_001123168 /// NM_207418 ///

XM_001128582 /// XM_001133363 /// XM_001133364 ///

XM_001133365

227261_at 1.37 down 2.11 down KLF12 Kruppel-like factor 12 NM_007249

1569527_at 1.12 down 2.11 down CDNA clone IMAGE:4842907

236140_at 1.88 down 2.12 down GCLM glutamate-cysteine ligase, modifier subunit NM_002061

231820_x_at 1.95 down 2.12 down ZNF587 zinc finger protein 587 NM_032828

230352_at 1.07 down 2.12 down PRPS2 Phosphoribosyl pyrophosphate synthetase 2 NM_001039091 /// NM_002765

228397_at 1.59 down 2.12 down TUG1 taurine upregulated gene 1 NR_002323

215236_s_at 2.25 down 2.12 down PICALM phosphatidylinositol binding clathrin assembly protein NM_001008660 /// NM_007166

236814_at 1.50 down 2.12 down MDM4 Mdm4 p53 binding protein homolog (mouse) NM_002393

204717_s_at 2.31 down 2.12 down SLC29A2 solute carrier family 29 (nucleoside transporters), member 2 NM_001532

226781_at 1.47 down 2.12 down C7orf55 chromosome 7 open reading frame 55 NM_197964

218372_at 1.41 down 2.12 down MED9 mediator complex subunit 9 NM_018019

214148_at 2.00 down 2.12 down Clone 23641 mRNA sequence

220607_x_at 2.20 down 2.12 down TH1L TH1-like (Drosophila) NM_198976

231919_at 1.34 down 2.12 down DBT dihydrolipoamide branched chain transacylase E2 NM_001918

229647_at 1.39 down 2.12 down

230556_at 1.71 down 2.13 down IMMP1L IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) NM_144981

231548_at 2.50 down 2.13 down FOXO3 Forkhead box O3 NM_001455 /// NM_201559

224644_at 1.92 down 2.13 down CDNA clone IMAGE:5278517

224768_at 2.49 down 2.13 down IWS1 IWS1 homolog (S. cerevisiae) NM_017969

232803_at 1.15 down 2.14 down FLJ31958 hypothetical protein FLJ31958

1556061_at 1.34 down 2.14 down RPP30 ribonuclease P/MRP 30kDa subunit NM_001104546 /// NM_006413

201447_at 1.52 down 2.14 down TIA1 TIA1 cytotoxic granule-associated RNA binding protein NM_022037 /// NM_022173

241924_at 2.22 down 2.14 down Transcribed locus

240231_at 1.59 down 2.14 down Transcribed locus

227152_at 1.61 down 2.14 down C12orf35 chromosome 12 open reading frame 35 NM_018169

204108_at 2.52 down 2.14 down NFYA nuclear transcription factor Y, alpha NM_002505 /// NM_021705

224565_at 2.91 down 2.14 down TncRNA trophoblast-derived noncoding RNA NR_002802

230350_at 2.15 down 2.14 down Transcribed locus

228106_at 2.08 down 2.15 down C4orf30 chromosome 4 open reading frame 30 NM_017741

200733_s_at 1.87 down 2.15 down PTP4A1 protein tyrosine phosphatase type IVA, member 1 NM_003463

230533_at 1.76 down 2.15 down ZMYND8 zinc finger, MYND-type containing 8 NM_012408 /// NM_183047 /// NM_183048

35820_at 1.76 down 2.15 down GM2A GM2 ganglioside activator NM_000405

214097_at 1.72 down 2.15 down RPS21 ribosomal protein S21 NM_001024

231319_x_at 1.91 down 2.15 down KIF9 kinesin family member 9 NM_022342 /// NM_182902 /// NM_182903

225462_at 1.57 down 2.15 down TMEM128 transmembrane protein 128 NM_032927

226545_at 2.01 down 2.15 down CD109 CD109 molecule NM_133493

218850_s_at 2.02 down 2.15 down LIMD1 LIM domains containing 1 NM_014240

210685_s_at 2.48 down 2.15 down UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) NM_001105562 /// NM_006048

215011_at 2.24 down 2.15 down SNHG3 small nucleolar RNA host gene (non-protein coding) 3 NR_002909

1554599_x_at 1.45 down 2.15 down MRNA; cDNA DKFZp547K189 (from clone DKFZp547K189)

218538_s_at 2.04 down 2.15 down MRS2 MRS2 magnesium homeostasis factor homolog (S. cerevisiae) NM_020662

229665_at 1.89 down 2.16 down CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa NM_001033505 /// NM_001033506 /// NM_001326

223318_s_at 2.10 down 2.16 down ALKBH7 alkB, alkylation repair homolog 7 (E. coli) NM_032306

227787_s_at 3.43 down 2.16 down MED30 mediator complex subunit 30 NM_080651

236247_at 2.24 down 2.16 down NSUN4 NOL1/NOP2/Sun domain family, member 4 NM_199044

225429_at 1.96 down 2.16 down PPP6C protein phosphatase 6, catalytic subunit NM_001123355 /// NM_001123369 /// NM_002721

241786_at 1.74 down 2.16 down Transcribed locus

200685_at 1.71 down 2.16 down SFRS11 splicing factor, arginine/serine-rich 11 NM_004768

203497_at 2.71 down 2.16 down MED1 mediator complex subunit 1 NM_004774

212943_at 1.99 down 2.16 down KIAA0528 KIAA0528 NM_014802

227908_at 1.59 down 2.16 down TBC1D24 TBC1 domain family, member 24 NM_020705

226829_at 2.87 down 2.16 down AFAP1L2 actin filament associated protein 1-like 2 NM_001001936 /// NM_032550

211933_s_at 1.87 down 2.16 down

HNRNPA3 ///

HNRNPA3P1

heterogeneous nuclear ribonucleoprotein A3 pseudogene 1 /// heterogeneous

nuclear ribonucleoprotein A3 NM_194247 /// NR_002726

235165_at 1.42 down 2.16 down PARD6B par-6 partitioning defective 6 homolog beta (C. elegans) NM_032521

232344_at 2.95 down 2.16 down CDNA FLJ11750 fis, clone HEMBA1005568

212714_at 1.75 down 2.16 down LARP4 La ribonucleoprotein domain family, member 4 NM_052879 /// NM_199188 /// NM_199190

210005_at 1.94 down 2.16 down GART

phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide

synthetase, phosphoribosylaminoimidazole synthetase NM_000819 /// NM_175085

235394_at 1.74 down 2.16 down Transcribed locus

228495_at 4.03 down 2.17 down CCDC75 coiled-coil domain containing 75 NM_174931

236451_at 1.67 down 2.17 down CDNA FLJ14635 fis, clone NT2RP2001196

201669_s_at 2.23 down 2.17 down MARCKS myristoylated alanine-rich protein kinase C substrate NM_002356

213123_at 2.19 down 2.17 down MFAP3 Microfibrillar-associated protein 3 NM_005927

239007_at 1.61 down 2.18 down ZNF616 zinc finger protein 616 NM_178523

227167_s_at 1.03 down 2.18 down Mesenchymal stem cell protein DSC96

227278_at 1.90 down 2.18 down Transcribed locus

221651_x_at 2.65 down 2.18 down IGK@ /// IGKC immunoglobulin kappa constant /// immunoglobulin kappa locus

242907_at 1.11 down 2.18 down

1559399_s_at 2.23 down 2.18 down ZCCHC10 zinc finger, CCHC domain containing 10 NM_017665

235398_at 1.46 down 2.18 down ZNF805 zinc finger protein 805 XM_001718504 /// XM_001718548 /// XM_001719150

227786_at 2.03 down 2.18 down MED30 mediator complex subunit 30 NM_080651

224992_s_at 1.93 down 2.18 down CMIP c-Maf-inducing protein NM_030629 /// NM_198390

223262_s_at 1.57 down 2.18 down FGFR1OP2 FGFR1 oncogene partner 2 NM_015633

224566_at 3.50 down 2.18 down TncRNA trophoblast-derived noncoding RNA NR_002802

Page 9: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

242247_at 1.38 down 2.19 down METT5D1 methyltransferase 5 domain containing 1 NM_001113528 /// NM_152636

229083_at 2.40 down 2.19 down HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 NM_006805

215498_s_at 3.40 down 2.19 down MAP2K3 mitogen-activated protein kinase kinase 3 NM_002756 /// NM_145109

226889_at 1.22 down 2.19 down WDR35 WD repeat domain 35 NM_001006657 /// NM_020779

209364_at 2.99 down 2.19 down BAD BCL2-antagonist of cell death NM_004322 /// NM_032989

1557029_at 3.06 down 2.19 down CDNA clone IMAGE:4822878

229128_s_at 1.30 down 2.19 down Transcribed locus

226406_at 1.89 down 2.19 down C18orf25 chromosome 18 open reading frame 25 NM_001008239 /// NM_145055

214048_at 2.52 down 2.19 down MBD4 methyl-CpG binding domain protein 4 NM_003925

223639_s_at 2.17 down 2.19 down ZNRD1 zinc ribbon domain containing 1 NM_014596 /// NM_170783

211089_s_at 2.83 down 2.19 down NEK3 NIMA (never in mitosis gene a)-related kinase 3 NM_002498 /// NM_152720

203533_s_at 1.56 down 2.19 down CUL5 cullin 5 NM_003478

214949_at 2.05 down 2.20 down CDNA FLJ31919 fis, clone NT2RP7004964

238378_at 2.44 down 2.20 down Transcribed locus

226347_at 1.96 down 2.20 down

218577_at 1.44 down 2.20 down LRRC40 leucine rich repeat containing 40 NM_017768

37577_at 3.05 down 2.20 down ARHGAP19 Rho GTPase activating protein 19 NM_032900

219351_at 2.23 down 2.20 down

SEDLP /// TRAPPC2 ///

ZNF547

trafficking protein particle complex 2 /// spondyloepiphyseal dysplasia, late,

pseudogene /// zinc finger protein 547 NM_001011658 /// NM_014563 /// NM_173631 /// NR_002166

236356_at 1.69 down 2.20 down NDUFS1

NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q

reductase) NM_005006

204671_s_at 1.16 down 2.20 down ANKRD6 ankyrin repeat domain 6 NM_014942

211530_x_at 1.92 down 2.20 down HLA-G major histocompatibility complex, class I, G NM_002127

1553400_a_at 1.70 down 2.20 down C17orf69 chromosome 17 open reading frame 69 XR_040436 /// XR_040437 /// XR_040438

207980_s_at 3.54 down 2.20 down CITED2

Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain,

2 NM_006079

225922_at 2.11 down 2.20 down FNIP2 folliculin interacting protein 2 NM_020840

225897_at 1.80 down 2.20 down MARCKS myristoylated alanine-rich protein kinase C substrate NM_002356

219080_s_at 1.19 down 2.20 down CTPS2 CTP synthase II NM_019857 /// NM_175859

225492_at 1.96 down 2.21 down TMEM33 transmembrane protein 33 NM_018126

225326_at 1.83 down 2.21 down RBM27 RNA binding motif protein 27

NM_018989 /// XM_001720239 /// XM_001723796 ///

XM_001723897

226546_at 1.76 down 2.21 down CDNA clone IMAGE:5268696

235927_at 1.57 down 2.21 down XPO1 exportin 1 (CRM1 homolog, yeast) NM_003400

203744_at 1.71 down 2.21 down HMGB3 high-mobility group box 3 NM_005342

233182_x_at 1.26 down 2.21 down ATXN3 Ataxin 3 NM_004993 /// NM_030660

240044_x_at 1.14 down 2.21 down TNRC6B Trinucleotide repeat containing 6B NM_001024843 /// NM_015088

212737_at 1.67 down 2.21 down GM2A GM2 ganglioside activator NM_000405

227616_at 1.32 down 2.21 down BCL9L B-cell CLL/lymphoma 9-like NM_182557

205263_at 1.17 down 2.21 down BCL10 B-cell CLL/lymphoma 10 NM_003921

223013_at 1.84 down 2.21 down TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 NM_024665

203514_at 2.37 down 2.21 down MAP3K3 mitogen-activated protein kinase kinase kinase 3 NM_002401 /// NM_203351

234994_at 1.40 down 2.21 down TMEM200A transmembrane protein 200A NM_052913

231302_at 1.73 down 2.21 down

242560_at 1.17 down 2.22 down FANCD2 Fanconi anemia, complementation group D2 NM_001018115 /// NM_033084

242842_at 1.82 down 2.22 down Transcribed locus

242294_at 2.56 down 2.22 down FBXO45 F-box protein 45 NM_001105573

226323_at 2.92 down 2.22 down ZNF830 zinc finger protein 830 NM_052857

219981_x_at 1.73 down 2.22 down ZNF587 zinc finger protein 587 NM_032828

228619_x_at 1.64 down 2.22 down TIPRL TIP41, TOR signaling pathway regulator-like (S. cerevisiae) NM_001031800 /// NM_152902

242712_x_at 2.56 down 2.23 down

RANBP2 /// RGPD1 ///

RGPD2 /// RGPD3 ///

RGPD4 /// RGPD5 ///

RGPD6 /// RGPD7 ///

RGPD8

RAN binding protein 2 /// RANBP2-like and GRIP domain containing 5 ///

RANBP2-like and GRIP domain containing 4 /// RANBP2-like and GRIP domain

containing 1 /// RANBP2-like and GRIP domain containing 7 /// RANBP2-like

and GRIP domain containing 3 /// RANBP2-like and GRIP domain containing 8

/// RANBP2-like and GRIP domain containing 6 /// RANBP2-like and GRIP

domain containing 2

NM_001024457 /// NM_001037866 /// NM_001078170 ///

NM_001123363 /// NM_005054 /// NM_006267 ///

NM_032260 /// XM_001133591 /// XM_001721299 ///

XM_001722279 /// XM_929931

1569178_at 2.68 down 2.23 down GRIA4 glutamate receptor, ionotrophic, AMPA 4

NM_000829 /// NM_001077243 /// NM_001077244 ///

NM_001112812

221671_x_at 2.72 down 2.23 down IGK@ /// IGKC immunoglobulin kappa constant /// immunoglobulin kappa locus

201436_at 1.59 down 2.23 down

EIF4E ///

LOC100131565 ///

LOC100132918

eukaryotic translation initiation factor 4E /// similar to Eukaryotic translation

initiation factor 4E /// similar to hCG1777996

NM_001968 /// XR_038724 /// XR_038758 /// XR_038877 ///

XR_039697 /// XR_042313 /// XR_042380

234978_at 1.23 down 2.23 down SLC36A4 solute carrier family 36 (proton/amino acid symporter), member 4 NM_152313

1557360_at 2.39 down 2.23 down LRPPRC leucine-rich PPR-motif containing NM_133259

218603_at 2.33 down 2.23 down HECA headcase homolog (Drosophila) NM_016217

212612_at 2.12 down 2.23 down RCOR1 REST corepressor 1 NM_015156

236400_at 1.67 down 2.23 down Transcribed locus

215566_x_at 1.57 down 2.23 down LYPLA2 lysophospholipase II NM_007260

219221_at 2.70 down 2.24 down ZBTB38 zinc finger and BTB domain containing 38 NM_001080412

232680_at 1.29 down 2.24 down HDGFL1 hepatoma derived growth factor-like 1 NM_138574

1554890_a_at 1.75 down 2.24 down TIA1 TIA1 cytotoxic granule-associated RNA binding protein NM_022037 /// NM_022173

227229_at 2.49 down 2.24 down CDNA clone IMAGE:5303499

244020_at 2.16 down 2.24 down Transcribed locus

228569_at 1.63 down 2.24 down PAPOLA poly(A) polymerase alpha NM_032632

224649_x_at 2.36 down 2.24 down CCNY cyclin Y NM_145012 /// NM_181698

220748_s_at 2.17 down 2.24 down ZNF580 zinc finger protein 580 NM_016202 /// NM_207115

209357_at 2.70 down 2.24 down CITED2

Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain,

2 NM_006079

244197_x_at 1.44 down 2.25 down

Page 10: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

225006_x_at 2.27 down 2.25 down TH1L TH1-like (Drosophila) NM_198976

227728_at 2.06 down 2.25 down CDNA FLJ42306 fis, clone TRACH2001646

233326_at 2.20 down 2.25 down CCDC39 coiled-coil domain containing 39 NM_181426

1553736_at 2.49 down 2.25 down CCDC131 coiled-coil domain containing 131 NM_144982

232889_at 3.81 down 2.25 down GUSBP1 glucuronidase, beta pseudogene 1 NM_207331 /// NR_003656 /// XM_001125975

229076_s_at 1.35 down 2.25 down Transcribed locus

243681_at 2.01 down 2.25 down SHANK2 SH3 and multiple ankyrin repeat domains 2 NM_012309 /// NM_133266

226742_at 1.82 down 2.25 down Transcribed locus

213390_at 1.98 down 2.26 down ZC3H4 zinc finger CCCH-type containing 4 NM_015168

241036_at 1.74 down 2.26 down

1554631_at 1.80 down 2.26 down ATM ataxia telangiectasia mutated NM_000051 /// NM_138292

241342_at 2.16 down 2.26 down TMEM65 transmembrane protein 65 NM_194291

227595_at 1.80 down 2.26 down ZMYM6 zinc finger, MYM-type 6 NM_007167

226730_s_at 2.03 down 2.26 down USP37 ubiquitin specific peptidase 37 NM_020935

228045_at 2.02 down 2.26 down CDNA FLJ30370 fis, clone BRACE2007832

227619_at 2.02 down 2.26 down WRNIP1 Werner helicase interacting protein 1 NM_020135 /// NM_130395

1556081_at 2.30 down 2.26 down CDNA FLJ33441 fis, clone BRACE2021932

232667_at 1.94 down 2.26 down CDNA FLJ13690 fis, clone PLACE2000097

232004_at 1.86 down 2.26 down HNRNPR heterogeneous nuclear ribonucleoprotein R

NM_001102397 /// NM_001102398 /// NM_001102399 ///

NM_005826

225707_at 2.30 down 2.26 down ARL6IP6 ADP-ribosylation-like factor 6 interacting protein 6 NM_152522

203653_s_at 3.32 down 2.26 down COIL coilin NM_004645

211974_x_at 2.49 down 2.26 down RBPJ recombination signal binding protein for immunoglobulin kappa J region NM_005349 /// NM_015874 /// NM_203283 /// NM_203284

225225_at 2.05 down 2.26 down LOC729082 Hypothetical protein LOC729082 XR_040992 /// XR_040993 /// XR_040994

242912_at 2.18 down 2.27 down P704P prostate-specific P704P XR_040579 /// XR_040580

242337_at 1.65 down 2.27 down Transcribed locus

227364_at 1.25 down 2.27 down

225261_x_at 2.25 down 2.27 down TH1L TH1-like (Drosophila) NM_198976

228604_at 1.19 down 2.27 down CDNA FLJ41946 fis, clone PLACE6019701

205134_s_at 1.71 down 2.27 down NUFIP1 nuclear fragile X mental retardation protein interacting protein 1 NM_012345

1569320_at 1.53 down 2.28 down GPBP1L1 GC-rich promoter binding protein 1-like 1 NM_021639

240432_x_at 1.56 down 2.28 down Transcribed locus

225912_at 1.74 down 2.28 down TP53INP1 tumor protein p53 inducible nuclear protein 1 NM_033285

203299_s_at 1.25 down 2.28 down AP1S2 adaptor-related protein complex 1, sigma 2 subunit NM_003916

44783_s_at 2.29 down 2.28 down HEY1 hairy/enhancer-of-split related with YRPW motif 1 NM_001040708 /// NM_012258

1555960_at 2.42 down 2.28 down HINT1 histidine triad nucleotide binding protein 1 NM_005340

226018_at 1.68 down 2.28 down C7orf41 chromosome 7 open reading frame 41 NM_152793

202984_s_at 3.11 down 2.28 down BAG5 BCL2-associated athanogene 5 NM_001015048 /// NM_001015049 /// NM_004873

201875_s_at 2.87 down 2.28 down MPZL1 myelin protein zero-like 1 NM_003953 /// NM_024569

213742_at 1.66 down 2.28 down SFRS11 splicing factor, arginine/serine-rich 11 NM_004768

215287_at 1.99 down 2.29 down ELISC-1

221193_s_at 1.82 down 2.29 down ZCCHC10 zinc finger, CCHC domain containing 10 NM_017665

226005_at 2.06 down 2.29 down UBE2G1 ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) NM_003342

203445_s_at 3.44 down 2.29 down CTDSP2

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small

phosphatase 2 NM_005730

243376_at 1.59 down 2.29 down TANK TRAF family member-associated NFKB activator NM_004180 /// NM_133484

235693_at 3.06 down 2.30 down Transcribed locus

244132_x_at 1.59 down 2.30 down ZNF518A Zinc finger protein 518A NM_014803

211713_x_at 2.43 down 2.30 down KIAA0101 KIAA0101 NM_001029989 /// NM_014736

207436_x_at 1.38 down 2.31 down KIAA0894 KIAA0894 protein

208953_at 2.76 down 2.31 down LARP5 La ribonucleoprotein domain family, member 5 NM_015155

239231_at 2.27 down 2.31 down CDNA FLJ41910 fis, clone PEBLM2007834

211220_s_at 1.25 down 2.31 down HSF2 heat shock transcription factor 2 NM_004506

230339_at 1.54 down 2.31 down CCDC138 Coiled-coil domain containing 138 NM_144978

214918_at 2.85 down 2.32 down HNRNPM heterogeneous nuclear ribonucleoprotein M NM_005968 /// NM_031203

225865_x_at 2.23 down 2.32 down TH1L TH1-like (Drosophila) NM_198976

220232_at 1.45 down 2.32 down SCD5 stearoyl-CoA desaturase 5 NM_001037582 /// NM_024906

228710_at 2.55 down 2.32 down Transcribed locus

203568_s_at 3.20 down 2.32 down TRIM38 tripartite motif-containing 38 NM_006355

208891_at 2.69 down 2.32 down DUSP6 dual specificity phosphatase 6 NM_001946 /// NM_022652

225556_at 2.55 down 2.32 down LOC203547 hypothetical protein LOC203547 NM_001017980

206574_s_at 2.45 down 2.32 down

LOC100131062 ///

PTP4A3

protein tyrosine phosphatase type IVA, member 3 /// similar to protein tyrosine

phosphatase type IVA, member 3 NM_007079 /// NM_032611 /// XM_001717048

228471_at 2.27 down 2.33 down CDNA FLJ11570 fis, clone HEMBA1003309

226782_at 1.88 down 2.33 down SLC25A30 solute carrier family 25, member 30 NM_001010875

213164_at 2.45 down 2.33 down SLC5A3 solute carrier family 5 (inositol transporters), member 3 NM_006933

219757_s_at 1.86 down 2.33 down C14orf101 chromosome 14 open reading frame 101 NM_017799

1555243_x_at 1.26 down 2.33 down C8orf59 chromosome 8 open reading frame 59

NM_001099670 /// NM_001099671 /// NM_001099672 ///

NM_001099673

236314_at 1.28 down 2.34 down Transcribed locus

235203_at 1.88 down 2.34 down CDNA FLJ40697 fis, clone THYMU2025406

205510_s_at 1.95 down 2.34 down FLJ10038 hypothetical protein FLJ10038

217958_at 2.62 down 2.34 down TRAPPC4 trafficking protein particle complex 4 NM_016146

204334_at 1.97 down 2.34 down KLF7 Kruppel-like factor 7 (ubiquitous) NM_003709

228026_at 1.76 down 2.34 down RP5-1000E10.4 suppressor of IKK epsilon NM_001102396 /// NM_025073

228084_at 1.99 down 2.34 down Transcribed locus

229395_at 2.25 down 2.34 down STX4 syntaxin 4 NM_004604

226746_s_at 1.95 down 2.35 down UBE4B Ubiquitination factor E4B (UFD2 homolog, yeast) NM_001105562 /// NM_006048

209348_s_at 2.30 down 2.36 down MAF v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) NM_001031804 /// NM_005360

Page 11: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

222502_s_at 1.92 down 2.36 down UFM1 ubiquitin-fold modifier 1 NM_016617

1558354_s_at 2.02 down 2.36 down CDNA clone IMAGE:5260583

1558164_s_at 2.91 down 2.36 down PEX13 Peroxisome biogenesis factor 13 NM_002618

37462_i_at 2.04 down 2.36 down SF3A2 splicing factor 3a, subunit 2, 66kDa NM_007165

239857_at 2.10 down 2.36 down CDNA FLJ37227 fis, clone BRAMY2000277

1558922_at 2.20 down 2.36 down Full length insert cDNA clone YF43G08

233536_at 3.24 down 2.36 down ASXL3 additional sex combs like 3 (Drosophila) NM_030632

32062_at 1.89 down 2.36 down LRRC14 leucine rich repeat containing 14 NM_014665

226465_s_at 2.26 down 2.37 down SON SON DNA binding protein NM_032195 /// NM_138927

225991_at 2.11 down 2.37 down TMEM41A transmembrane protein 41A NM_080652

228941_at 1.41 down 2.37 down ALG10B

asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-

glucosyltransferase) NM_001013620

238346_s_at 1.63 down 2.37 down TGS1 trimethylguanosine synthase homolog (S. cerevisiae) NM_024831

224653_at 2.16 down 2.37 down CDNA FLJ33081 fis, clone TRACH2000321

241804_at 1.09 down 2.38 down Transcribed locus

208921_s_at 2.53 down 2.38 down SRI sorcin NM_003130 /// NM_198901

1552664_at 1.30 down 2.38 down FLCN folliculin NM_144606 /// NM_144997

208954_s_at 2.02 down 2.38 down LARP5 La ribonucleoprotein domain family, member 5 NM_015155

1560290_at 1.29 down 2.38 down LOC100129895 Hypothetical protein LOC100129895 XM_001722541 /// XM_001722704 /// XM_001725097

203531_at 1.81 down 2.38 down CUL5 cullin 5 NM_003478

230379_x_at 2.48 down 2.39 down C2orf56 chromosome 2 open reading frame 56 NM_001083946 /// NM_144736

239066_at 2.26 down 2.39 down Transcribed locus

214662_at 1.35 down 2.39 down WDR43 WD repeat domain 43 NM_015131

209519_at 2.21 down 2.39 down NCBP1 nuclear cap binding protein subunit 1, 80kDa NM_002486

223860_at 1.79 down 2.39 down

212660_at 2.38 down 2.40 down PHF15 PHD finger protein 15 NM_015288

225538_at 2.81 down 2.40 down ZCCHC9 zinc finger, CCHC domain containing 9 NM_032280

235573_at 2.14 down 2.40 down Transcribed locus

212277_at 1.74 down 2.40 down MTMR4 myotubularin related protein 4 NM_004687

216589_at 3.26 down 2.40 down LOC390998 similar to hCG1644589 XM_001716257 /// XM_372759 /// XM_938288

213694_at 2.17 down 2.40 down RSBN1 round spermatid basic protein 1 NM_018364

201416_at 2.64 down 2.40 down SOX4 SRY (sex determining region Y)-box 4 NM_003107

229353_s_at 2.10 down 2.40 down NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 NM_022731

238431_at 2.52 down 2.41 down Transcribed locus

203640_at 1.91 down 2.41 down MBNL2 muscleblind-like 2 (Drosophila) NM_144778 /// NM_207304

201369_s_at 2.65 down 2.41 down ZFP36L2 zinc finger protein 36, C3H type-like 2 NM_006887

229697_at 1.60 down 2.41 down HIRIP3 HIRA interacting protein 3 NM_003609

213120_at 4.37 down 2.41 down UHRF1BP1L UHRF1 (ICBP90) binding protein 1-like NM_001006947 /// NM_015054

213327_s_at 1.99 down 2.42 down USP12 ubiquitin specific peptidase 12 NM_182488

238963_at 2.16 down 2.42 down MRNA full length insert cDNA clone EUROIMAGE 1652049

1556698_a_at 1.98 down 2.42 down GPRIN3 GPRIN family member 3 NM_198281

217959_s_at 3.12 down 2.42 down TRAPPC4 trafficking protein particle complex 4 NM_016146

231101_at 3.15 down 2.42 down Transcribed locus

219978_s_at 2.57 down 2.43 down NUSAP1 nucleolar and spindle associated protein 1 NM_016359 /// NM_018454

238013_at 1.58 down 2.43 down PLEKHA2

pleckstrin homology domain containing, family A (phosphoinositide binding

specific) member 2 NM_021623

226806_s_at 2.20 down 2.44 down Transcribed locus

207829_s_at 1.34 down 2.44 down BNIP1 BCL2/adenovirus E1B 19kDa interacting protein 1 NM_001205 /// NM_013978 /// NM_013979 /// NM_013980

213923_at 1.66 down 2.44 down RAP2B RAP2B, member of RAS oncogene family NM_002886

235589_s_at 1.78 down 2.44 down Transcribed locus

215708_s_at 1.92 down 2.44 down PRIM2 primase, DNA, polypeptide 2 (58kDa) NM_000947

229606_at 1.16 down 2.44 down Transcribed locus

206989_s_at 2.60 down 2.44 down SFRS2IP splicing factor, arginine/serine-rich 2, interacting protein NM_004719

224743_at 2.06 down 2.44 down IMPAD1 inositol monophosphatase domain containing 1 NM_017813

243405_at 1.77 down 2.45 down Transcribed locus

202774_s_at 2.42 down 2.45 down SFRS8

splicing factor, arginine/serine-rich 8 (suppressor-of-white-apricot homolog,

Drosophila) NM_004592

231090_s_at 1.50 down 2.45 down ARID2 AT rich interactive domain 2 (ARID, RFX-like) NM_152641

214260_at 1.03 down 2.45 down COPS8 COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis) NM_006710 /// NM_198189

239258_at 1.86 down 2.45 down Transcribed locus

236535_at 1.93 down 2.45 down SMC6 structural maintenance of chromosomes 6 NM_024624

220391_at 3.02 down 2.45 down ZBTB3 zinc finger and BTB domain containing 3 NM_024784

241833_at 2.53 down 2.46 down Full length insert cDNA clone YY86C01

230570_at 2.10 down 2.46 down Transcribed locus

1556678_a_at 1.42 down 2.46 down Full length insert cDNA clone ZD41C11

225363_at 1.98 down 2.46 down PTEN phosphatase and tensin homolog (mutated in multiple advanced cancers 1) NM_000314

228588_s_at 1.70 down 2.46 down UBE2B ubiquitin-conjugating enzyme E2B (RAD6 homolog) NM_003337

228478_at 3.58 down 2.47 down Full length insert cDNA YH99G08

238484_s_at 1.48 down 2.47 down MRNA; clone CD 43T7

226816_s_at 1.93 down 2.48 down KIAA1143 KIAA1143 NM_020696

229949_at 3.25 down 2.48 down Transcribed locus

226990_at 1.65 down 2.48 down CAPRIN1 cell cycle associated protein 1 NM_005898 /// NM_203364

204842_x_at 1.99 down 2.48 down PRKAR2A protein kinase, cAMP-dependent, regulatory, type II, alpha NM_004157

203739_at 2.39 down 2.48 down ZNF217 zinc finger protein 217 NM_006526

1554878_a_at 1.53 down 2.48 down ABCD3 ATP-binding cassette, sub-family D (ALD), member 3 NM_001122674 /// NM_002858

227162_at 2.91 down 2.48 down ZBTB26 zinc finger and BTB domain containing 26 NM_020924

1557987_at 1.85 down 2.49 down LOC653786 otoancorin pseudogene NR_003676 /// XR_017362

227044_at 2.92 down 2.49 down Transcribed locus

Page 12: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

235215_at 1.96 down 2.49 down ERCC4

excision repair cross-complementing rodent repair deficiency, complementation

group 4 NM_005236

1552789_at 2.45 down 2.50 down SEC62 SEC62 homolog (S. cerevisiae) NM_003262

1555004_a_at 1.49 down 2.50 down RBL1 retinoblastoma-like 1 (p107) NM_002895 /// NM_183404

208506_at 1.67 down 2.50 down

HIST1H2BN ///

HIST1H3A /// HIST1H3B

/// HIST1H3C ///

HIST1H3D /// HIST1H3E

/// HIST1H3F ///

HIST1H3G /// HIST1H3H

/// HIST1H3I ///

HIST1H3J

histone cluster 1, H2bn /// histone cluster 1, H3a /// histone cluster 1, H3d ///

histone cluster 1, H3c /// histone cluster 1, H3e /// histone cluster 1, H3i ///

histone cluster 1, H3g /// histone cluster 1, H3j /// histone cluster 1, H3h ///

histone cluster 1, H3b /// histone cluster 1, H3f

NM_003520 /// NM_003529 /// NM_003530 /// NM_003531 ///

NM_003532 /// NM_003533 /// NM_003534 /// NM_003535 ///

NM_003536 /// NM_003537 /// NM_021018

209695_at 2.44 down 2.50 down

LOC100131062 ///

PTP4A3

protein tyrosine phosphatase type IVA, member 3 /// similar to protein tyrosine

phosphatase type IVA, member 3 NM_007079 /// NM_032611 /// XM_001717048

242312_x_at 1.52 down 2.50 down Transcribed locus

221743_at 2.41 down 2.50 down CUGBP1 CUG triplet repeat, RNA binding protein 1 NM_001025596 /// NM_006560 /// NM_198700

1552622_s_at 3.31 down 2.50 down

LOC100134053 ///

LOC392713 ///

LOC441259 /// POLR2J2

/// POLR2J4

polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa pseudogene ///

DNA directed RNA polymerase II polypeptide J-related /// similar to

hCG1989139 /// PMS2 postmeiotic segregation increased 2 (S. cerevisiae)-like

/// similar to POLR2J4 protein

NM_032959 /// NR_003655 /// XM_001713964 ///

XM_001714277 /// XM_001717094 /// XM_001718001 ///

XM_001718158 /// XR_042143 /// XR_042182

230466_s_at 1.26 down 2.51 down Mesenchymal stem cell protein DSC96

239562_at 2.10 down 2.51 down MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like NM_001004346

223474_at 1.52 down 2.51 down C14orf4 chromosome 14 open reading frame 4 NM_024496

226317_at 2.27 down 2.51 down PPP4R2 protein phosphatase 4, regulatory subunit 2 NM_174907

201382_at 2.31 down 2.51 down CACYBP calcyclin binding protein NM_001007214 /// NM_014412

204220_at 2.66 down 2.51 down GMFG glia maturation factor, gamma NM_004877

222270_at 2.15 down 2.51 down SMEK2 SMEK homolog 2, suppressor of mek1 (Dictyostelium) NM_001122964 /// NM_020463

228809_at 2.30 down 2.52 down CXorf40A chromosome X open reading frame 40A NM_178124

227801_at 2.14 down 2.52 down TRIM59 tripartite motif-containing 59 NM_173084

1556261_a_at 1.51 down 2.53 down CDNA FLJ40252 fis, clone TESTI2024299

1568934_at 3.73 down 2.53 down CX3CR1 chemokine (C-X3-C motif) receptor 1 NM_001337

230177_at 2.23 down 2.53 down Clone HLS_IMAGE_204740 mRNA sequence

233068_at 1.92 down 2.53 down CDNA FLJ13202 fis, clone NT2RP3004503

208745_at 2.46 down 2.54 down ATP5L ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G NM_006476

226450_at 1.53 down 2.55 down INSR insulin receptor NM_000208 /// NM_001079817

229333_at 2.29 down 2.55 down Transcribed locus

208952_s_at 1.91 down 2.55 down LARP5 La ribonucleoprotein domain family, member 5 NM_015155

241940_at 2.66 down 2.55 down Transcribed locus

226902_at 2.55 down 2.55 down CDNA FLJ34165 fis, clone FCBBF3014770

229129_at 1.78 down 2.56 down Transcribed locus

224684_at 2.69 down 2.56 down SNX12 sorting nexin 12 NM_013346

201054_at 2.18 down 2.56 down HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 NM_006805

201449_at 2.96 down 2.57 down TIA1 TIA1 cytotoxic granule-associated RNA binding protein NM_022037 /// NM_022173

212952_at 1.00 down 2.57 down Transcribed locus

207168_s_at 2.11 down 2.57 down H2AFY H2A histone family, member Y

NM_001040158 /// NM_004893 /// NM_138609 ///

NM_138610

222614_at 1.65 down 2.57 down RWDD2B RWD domain containing 2B NM_016940

228754_at 3.66 down 2.57 down SLC6A6 solute carrier family 6 (neurotransmitter transporter, taurine), member 6 NM_003043

1557810_at 1.10 down 2.57 down Clone HEA5 Cri-du-chat critical region mRNA

224870_at 2.13 down 2.58 down KIAA0114 KIAA0114

211064_at 1.45 down 2.58 down ZNF493 zinc finger protein 493 NM_001076678 /// NM_175910

236170_x_at 1.63 down 2.58 down HERPUD2 HERPUD family member 2 NM_022373

228930_at 2.53 down 2.58 down MRNA full length insert cDNA clone EUROIMAGE 898037

225643_at 2.22 down 2.58 down MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1-like NM_144578

230123_at 2.49 down 2.59 down NECAP2 NECAP endocytosis associated 2 NM_018090

205281_s_at 1.49 down 2.59 down PIGA

phosphatidylinositol glycan anchor biosynthesis, class A (paroxysmal nocturnal

hemoglobinuria) NM_002641 /// NM_020473

235425_at 3.86 down 2.59 down SGOL2 shugoshin-like 2 (S. pombe) NM_152524

212092_at 1.76 down 2.59 down PEG10 paternally expressed 10 NM_001040152 /// NM_015068

203891_s_at 1.75 down 2.59 down DAPK3 death-associated protein kinase 3 NM_001348

215190_at 3.00 down 2.59 down EIF3M eukaryotic translation initiation factor 3, subunit M NM_006360

212605_s_at 2.28 down 2.60 down CDNA FLJ32526 fis, clone SMINT2000073

243846_x_at 1.93 down 2.60 down

229666_s_at 3.00 down 2.61 down CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa NM_001033505 /// NM_001033506 /// NM_001326

204449_at 1.37 down 2.61 down PDCL phosducin-like NM_005388

217824_at 3.00 down 2.61 down UBE2J1 ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast) NM_016021

228879_at 2.17 down 2.62 down SNORD104 small nucleolar RNA, C/D box 104 NR_004380

216783_at 1.24 down 2.63 down CDNA: FLJ21899 fis, clone HEP03467

212482_at 2.65 down 2.63 down RMND5A required for meiotic nuclear division 5 homolog A (S. cerevisiae) NM_022780

226099_at 2.09 down 2.63 down ELL2 elongation factor, RNA polymerase II, 2 NM_012081

238040_at 1.27 down 2.63 down Transcribed locus

228650_at 1.72 down 2.63 down CDNA FLJ38469 fis, clone FEBRA2021892

221245_s_at 3.46 down 2.63 down FZD5 frizzled homolog 5 (Drosophila) NM_003468

202368_s_at 5.37 down 2.63 down TRAM2 translocation associated membrane protein 2 NM_012288

1555001_at 1.39 down 2.64 down IQCF1 IQ motif containing F1 NM_152397

239328_at 3.60 down 2.64 down CDNA FLJ35362 fis, clone SKMUS2000330

243683_at 3.52 down 2.65 down MORF4L2 Mortality factor 4 like 2 NM_012286

Page 13: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

231449_at 2.51 down 2.65 down Transcribed locus

238379_x_at 3.02 down 2.66 down Transcribed locus

227351_at 1.13 down 2.66 down C16orf52 chromosome 16 open reading frame 52 NM_173501

239101_at 1.46 down 2.66 down ITCH itchy E3 ubiquitin protein ligase homolog (mouse) NM_031483

204831_at 2.47 down 2.66 down CDK8 cyclin-dependent kinase 8 NM_001260

235389_at 2.41 down 2.67 down PHF20 PHD finger protein 20 NM_016436

226568_at 2.65 down 2.67 down FAM102B family with sequence similarity 102, member B NM_001010883

225467_s_at 3.31 down 2.67 down RDH13 retinol dehydrogenase 13 (all-trans/9-cis) NM_138412

213391_at 1.81 down 2.67 down DPY19L4 dpy-19-like 4 (C. elegans) NM_181787

230380_at 3.00 down 2.67 down THAP2 THAP domain containing, apoptosis associated protein 2 NM_031435

209754_s_at 2.27 down 2.67 down TMPO thymopoietin NM_001032283 /// NM_001032284 /// NM_003276

228049_x_at 3.11 down 2.67 down

Transcribed locus, strongly similar to XP_001172939.1 PREDICTED:

hypothetical protein [Pan troglodytes]

242618_at 2.06 down 2.68 down TRIM26 Tripartite motif-containing 26 NM_003449

215786_at 1.16 down 2.68 down CDNA FLJ12108 fis, clone MAMMA1000009

227405_s_at 1.16 down 2.68 down FZD8 frizzled homolog 8 (Drosophila) NM_031866

217289_s_at 4.00 down 2.68 down SLC37A4 solute carrier family 37 (glucose-6-phosphate transporter), member 4 NM_001467

220800_s_at 1.51 down 2.69 down TMOD3 tropomodulin 3 (ubiquitous) NM_014547

1555989_at 1.79 down 2.69 down Transcribed locus

202317_s_at 3.05 down 2.69 down UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) NM_001105562 /// NM_006048

235837_at 3.07 down 2.69 down Transcribed locus

210347_s_at 2.62 down 2.71 down BCL11A B-cell CLL/lymphoma 11A (zinc finger protein) NM_018014 /// NM_022893 /// NM_138559

217448_s_at 2.72 down 2.71 down LOC285412 /// TOX4 TOX high mobility group box family member 4 /// similar to KIAA0737 protein NM_014828 /// XR_017405 /// XR_019409 /// XR_039448

214162_at 3.31 down 2.71 down LOC284244 hypothetical protein LOC284244

228392_at 1.35 down 2.72 down ZNF302 zinc finger protein 302 NM_001012320 /// NM_018443

223322_at 2.97 down 2.72 down RASSF5 Ras association (RalGDS/AF-6) domain family member 5 NM_182663 /// NM_182664 /// NM_182665

1569349_at 3.58 down 2.72 down C11orf30 chromosome 11 open reading frame 30 NM_020193

201605_x_at 2.34 down 2.73 down CNN2 calponin 2 NM_004368 /// NM_201277

224847_at 3.29 down 2.73 down CDK6 cyclin-dependent kinase 6 NM_001259

1563498_s_at 1.45 down 2.73 down SLC25A45 solute carrier family 25, member 45 NM_001077241 /// NM_182556

238015_at 1.80 down 2.73 down LOC201725 hypothetical protein LOC201725 NM_001008393

242289_at 1.70 down 2.74 down

207785_s_at 2.79 down 2.74 down RBPJ recombination signal binding protein for immunoglobulin kappa J region NM_005349 /// NM_015874 /// NM_203283 /// NM_203284

227003_at 2.75 down 2.75 down RAB28 RAB28, member RAS oncogene family NM_001017979 /// NM_004249

229334_at 1.21 down 2.75 down Transcribed locus

224848_at 3.36 down 2.75 down CDK6 cyclin-dependent kinase 6 NM_001259

206363_at 3.08 down 2.76 down MAF v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) NM_001031804 /// NM_005360

217363_x_at 1.20 down 2.76 down

206066_s_at 2.22 down 2.77 down RAD51C RAD51 homolog C (S. cerevisiae) NM_002876 /// NM_058216

212288_at 2.79 down 2.78 down FNBP1 formin binding protein 1 NM_015033

222826_at 3.59 down 2.78 down PLDN pallidin homolog (mouse) NM_012388

201417_at 1.51 down 2.79 down SOX4 SRY (sex determining region Y)-box 4 NM_003107

208896_at 2.40 down 2.79 down DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 NM_006773

225053_at 2.16 down 2.79 down CNOT7 CCR4-NOT transcription complex, subunit 7 NM_013354 /// NM_054026

201670_s_at 2.88 down 2.80 down MARCKS myristoylated alanine-rich protein kinase C substrate NM_002356

203620_s_at 2.26 down 2.80 down FCHSD2 FCH and double SH3 domains 2 NM_014824

209811_at 1.68 down 2.80 down CASP2

caspase 2, apoptosis-related cysteine peptidase (neural precursor cell

expressed, developmentally down-regulated 2) NM_032982 /// NM_032983

226810_at 2.73 down 2.81 down OGFRL1 opioid growth factor receptor-like 1 NM_024576

238778_at 1.36 down 2.82 down MPP7 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) NM_173496

239678_at 1.21 down 2.82 down Transcribed locus

212313_at 2.24 down 2.82 down CHMP7 CHMP family, member 7 NM_152272

231252_at 1.64 down 2.83 down C2orf67 chromosome 2 open reading frame 67 NM_152519

226666_at 2.02 down 2.83 down DAAM1 dishevelled associated activator of morphogenesis 1 NM_014992

203132_at 1.95 down 2.83 down RB1 retinoblastoma 1 (including osteosarcoma) NM_000321

222105_s_at 1.42 down 2.84 down NKIRAS2 NFKB inhibitor interacting Ras-like 2 NM_001001349 /// NM_017595

229504_at 1.34 down 2.84 down Transcribed locus

243553_x_at 1.31 down 2.84 down Transcribed locus

243531_at 2.68 down 2.85 down ORAOV1 oral cancer overexpressed 1 NM_153451

34449_at 3.38 down 2.85 down CASP2

caspase 2, apoptosis-related cysteine peptidase (neural precursor cell

expressed, developmentally down-regulated 2) NM_032982 /// NM_032983

243147_x_at 2.16 down 2.86 down Transcribed locus

228196_s_at 2.19 down 2.87 down Transcribed locus

235607_at 2.96 down 2.87 down Transcribed locus

204387_x_at 3.52 down 2.87 down MRP63 mitochondrial ribosomal protein 63 NM_024026

236196_at 3.53 down 2.87 down CDNA FLJ42548 fis, clone BRACE3004996

1554449_at 1.44 down 2.87 down MIER3 mesoderm induction early response 1, family member 3 NM_152622

214211_at 2.65 down 2.87 down FTH1 ferritin, heavy polypeptide 1 NM_002032

225087_at 2.05 down 2.88 down C16orf63 chromosome 16 open reading frame 63 NM_144600

224879_at 2.82 down 2.89 down C9orf123 chromosome 9 open reading frame 123 NM_033428

224758_at 1.66 down 2.90 down SLC13A4 solute carrier family 13 (sodium/sulfate symporters), member 4 NM_012450

242256_x_at 1.37 down 2.90 down

226909_at 1.64 down 2.92 down ZNF518B zinc finger protein 518B NM_053042

244547_at 2.13 down 2.92 down LOC645851 Hypothetical LOC645851 XM_001726201 /// XM_928834 /// XM_940488

213757_at 1.33 down 2.93 down

Transcribed locus, weakly similar to XP_001478155.1 PREDICTED:

hypothetical protein [Mus musculus]

219421_at 2.26 down 2.94 down TTC33 tetratricopeptide repeat domain 33 NM_012382

Page 14: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

244030_at 2.26 down 2.94 down LOC730432 /// STYX

serine/threonine/tyrosine interacting protein /// similar to

serine/threonine/tyrosine interacting protein NM_145251 /// XM_001125680

212498_at 3.18 down 2.95 down Cri-du-chat region mRNA, clone NIBB11

215954_s_at 4.19 down 2.95 down C19orf29 chromosome 19 open reading frame 29 NM_001080543 /// NM_021231

238633_at 2.23 down 2.95 down EPC1 Enhancer of polycomb homolog 1 (Drosophila) NM_025209

223342_at 2.83 down 2.96 down RRM2B ribonucleotide reductase M2 B (TP53 inducible) NM_015713

222458_s_at 3.20 down 2.96 down C1orf108 chromosome 1 open reading frame 108 NM_024595

1553704_x_at 1.56 down 2.96 down ZNF791 zinc finger protein 791 NM_153358

209549_s_at 3.22 down 2.98 down DGUOK deoxyguanosine kinase NM_080916 /// NM_080918

219646_at 2.62 down 2.99 down DEF8 differentially expressed in FDCP 8 homolog (mouse) NM_017702 /// NM_207514

222481_at 2.13 down 2.99 down FXC1 fracture callus 1 homolog (rat) NM_012192

231174_s_at 1.27 down 3.00 down Transcribed locus

242146_at 2.81 down 3.00 down SNRPA1 Small nuclear ribonucleoprotein polypeptide A' NM_003090

235675_at 2.56 down 3.01 down DHFRL1 dihydrofolate reductase-like 1 NM_176815

229265_at 2.24 down 3.02 down SKI v-ski sarcoma viral oncogene homolog (avian) NM_003036

222309_at 2.42 down 3.03 down C6orf62 Chromosome 6 open reading frame 62 NM_030939

241686_x_at 1.87 down 3.03 down Transcribed locus

227338_at 1.43 down 3.04 down LOC440983 hypothetical gene supported by BC066916 XM_498946 /// XM_944951

207730_x_at 2.33 down 3.05 down

212293_at 2.43 down 3.05 down HIPK1 homeodomain interacting protein kinase 1 NM_152696 /// NM_181358 /// NM_198268 /// NM_198269

235037_at 2.58 down 3.06 down TMEM41A transmembrane protein 41A NM_080652

228248_at 2.29 down 3.07 down RICTOR rapamycin-insensitive companion of mTOR NM_152756

217632_at 1.67 down 3.07 down GNL3L guanine nucleotide binding protein-like 3 (nucleolar)-like NM_019067

241815_at 2.45 down 3.08 down Transcribed locus

235800_at 1.01 down 3.08 down CDNA FLJ34029 fis, clone FCBBF2003636

216384_x_at 3.56 down 3.09 down PTMAP4 prothymosin, alpha pseudogene 4 (gene sequence 112)

230141_at 2.39 down 3.09 down ARID4A AT rich interactive domain 4A (RBP1-like) NM_002892 /// NM_023000 /// NM_023001

231832_at 1.72 down 3.09 down GALNT4

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-

acetylgalactosaminyltransferase 4 (GalNAc-T4) NM_003774

224645_at 2.58 down 3.10 down CDNA FLJ33081 fis, clone TRACH2000321

233193_x_at 1.02 down 3.11 down INTS4 integrator complex subunit 4 NM_033547

1560514_at 1.78 down 3.11 down LOC285205 hypothetical LOC285205 XR_040986 /// XR_040987 /// XR_040988

201448_at 3.22 down 3.11 down TIA1 TIA1 cytotoxic granule-associated RNA binding protein NM_022037 /// NM_022173

228638_at 1.57 down 3.11 down Transcribed locus

212881_at 3.65 down 3.13 down PIAS4 protein inhibitor of activated STAT, 4 NM_015897

214948_s_at 3.27 down 3.14 down TMF1 TATA element modulatory factor 1 NM_007114

226982_at 2.60 down 3.14 down ELL2 elongation factor, RNA polymerase II, 2 NM_012081

229220_x_at 2.94 down 3.15 down NOM1 nucleolar protein with MIF4G domain 1 NM_138400

200607_s_at 3.24 down 3.16 down RAD21 RAD21 homolog (S. pombe) NM_006265

240673_at 1.54 down 3.16 down Transcribed locus

228999_at 2.99 down 3.17 down CHD2 chromodomain helicase DNA binding protein 2 NM_001042572 /// NM_001271

240173_at 4.65 down 3.17 down Transcribed locus

200026_at 2.67 down 3.18 down RPL34 ribosomal protein L34 NM_000995 /// NM_033625

1564637_a_at 1.74 down 3.21 down FAM98B family with sequence similarity 98, member B NM_001042429 /// NM_173611

236648_at 1.81 down 3.23 down Transcribed locus

204569_at 2.12 down 3.23 down ICK intestinal cell (MAK-like) kinase NM_014920 /// NM_016513

1553703_at 3.36 down 3.24 down ZNF791 zinc finger protein 791 NM_153358

219497_s_at 3.87 down 3.25 down BCL11A B-cell CLL/lymphoma 11A (zinc finger protein) NM_018014 /// NM_022893 /// NM_138559

1553315_at 1.57 down 3.26 down SLFNL1 schlafen-like 1 NM_144990

205286_at 3.07 down 3.27 down TFAP2C

transcription factor AP-2 gamma (activating enhancer binding protein 2

gamma) NM_003222

1569191_at 2.44 down 3.27 down ZNF826 zinc finger protein 826 NM_001039884

218181_s_at 1.31 down 3.28 down MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 NM_004834 /// NM_145686 /// NM_145687

205036_at 2.78 down 3.29 down LSM6 LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) NM_007080

226395_at 2.45 down 3.29 down HOOK3 hook homolog 3 (Drosophila) NM_032410

202934_at 2.61 down 3.30 down HK2 hexokinase 2 NM_000189

228093_at 3.19 down 3.31 down ZNF599 zinc finger protein 599 NM_001007248

202431_s_at 4.52 down 3.32 down MYC v-myc myelocytomatosis viral oncogene homolog (avian) NM_002467

1569706_at 3.22 down 3.32 down MYSM1 Myb-like, SWIRM and MPN domains 1 NM_001085487

212608_s_at 2.85 down 3.32 down CDNA FLJ32526 fis, clone SMINT2000073

212595_s_at 3.05 down 3.33 down DAZAP2 DAZ associated protein 2 NM_014764

227095_at 2.41 down 3.33 down CDNA: FLJ22522 fis, clone HRC12491

225182_at 2.94 down 3.35 down TMEM50B transmembrane protein 50B NM_006134

235264_at 1.08 down 3.35 down HCFC2 host cell factor C2 NM_013320

208662_s_at 3.38 down 3.37 down TTC3 tetratricopeptide repeat domain 3 NM_001001894 /// NM_003316

224046_s_at 3.27 down 3.37 down PDE7A phosphodiesterase 7A NM_002603 /// NM_002604

227119_at 2.57 down 3.37 down CNOT6L CCR4-NOT transcription complex, subunit 6-like NM_144571

235879_at 3.95 down 3.39 down MBNL1 Muscleblind-like (Drosophila)

NM_021038 /// NM_207292 /// NM_207293 /// NM_207294 ///

NM_207295 /// NM_207296 /// NM_207297

1554321_a_at 2.85 down 3.40 down NFS1 NFS1 nitrogen fixation 1 homolog (S. cerevisiae) NM_021100

238495_at 1.04 down 3.41 down CDNA FLJ41444 fis, clone BRSTN2001801

226339_at 2.98 down 3.42 down TRUB1 TruB pseudouridine (psi) synthase homolog 1 (E. coli) NM_139169

203816_at 3.43 down 3.42 down DGUOK deoxyguanosine kinase NM_080916 /// NM_080918

227051_at 4.70 down 3.43 down CDNA FLJ13585 fis, clone PLACE1009150

229204_at 2.93 down 3.45 down HP1BP3 Heterochromatin protein 1, binding protein 3 NM_016287

225711_at 2.18 down 3.46 down ARL6IP6 ADP-ribosylation-like factor 6 interacting protein 6 NM_152522

205167_s_at 2.34 down 3.48 down CDC25C cell division cycle 25 homolog C (S. pombe) NM_001790 /// NM_022809

228594_at 1.29 down 3.48 down C5orf33 chromosome 5 open reading frame 33 NM_001085411 /// NM_153013

231925_at 3.42 down 3.49 down CDNA: FLJ23006 fis, clone LNG00414

Page 15: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

224591_at 3.62 down 3.51 down HP1BP3 heterochromatin protein 1, binding protein 3 NM_016287

214500_at 3.53 down 3.51 down H2AFY H2A histone family, member Y

NM_001040158 /// NM_004893 /// NM_138609 ///

NM_138610

244396_at 1.29 down 3.51 down G3BP1 GTPase activating protein (SH3 domain) binding protein 1 NM_005754 /// NM_198395

238761_at 7.67 down 3.56 down Transcribed locus

225673_at 4.15 down 3.58 down MYADM myeloid-associated differentiation marker

NM_001020818 /// NM_001020819 /// NM_001020820 ///

NM_001020821 /// NM_138373

207638_at 3.88 down 3.59 down PRSS7 protease, serine, 7 (enterokinase) NM_002772

208895_s_at 3.51 down 3.61 down DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 NM_006773

227964_at 3.34 down 3.61 down FRMD8 FERM domain containing 8 NM_031904

240108_at 10.32 down 3.62 down Transcribed locus

203303_at 2.72 down 3.62 down DYNLT3 dynein, light chain, Tctex-type 3 NM_006520

1559190_s_at 3.04 down 3.63 down RDH13 Transcribed locus /// Retinol dehydrogenase 13 (all-trans/9-cis) NM_138412

1558739_at 2.20 down 3.64 down CDNA FLJ37336 fis, clone BRAMY2020412

227897_at 2.60 down 3.67 down Transcribed locus

213229_at 2.82 down 3.69 down DICER1 dicer 1, ribonuclease type III NM_030621 /// NM_177438

224592_x_at 3.76 down 3.69 down HP1BP3 heterochromatin protein 1, binding protein 3 NM_016287

1553113_s_at 3.47 down 3.71 down CDK8 cyclin-dependent kinase 8 NM_001260

200794_x_at 4.18 down 3.71 down DAZAP2 DAZ associated protein 2 NM_014764

213875_x_at 3.06 down 3.72 down C6orf62 chromosome 6 open reading frame 62 NM_030939

205967_at 5.90 down 3.78 down

HIST1H4A /// HIST1H4B

/// HIST1H4C ///

HIST1H4D /// HIST1H4E

/// HIST1H4F ///

HIST1H4H /// HIST1H4I

/// HIST1H4J ///

HIST1H4K /// HIST1H4L

/// HIST2H4A ///

HIST2H4B /// HIST4H4

histone cluster 1, H4i /// histone cluster 1, H4a /// histone cluster 1, H4d ///

histone cluster 1, H4f /// histone cluster 1, H4k /// histone cluster 1, H4j ///

histone cluster 1, H4c /// histone cluster 1, H4h /// histone cluster 1, H4b ///

histone cluster 1, H4e /// histone cluster 1, H4l /// histone cluster 2, H4a ///

histone cluster 4, H4 /// histone cluster 2, H4b

NM_001034077 /// NM_003495 /// NM_003538 ///

NM_003539 /// NM_003540 /// NM_003541 /// NM_003542 ///

NM_003543 /// NM_003544 /// NM_003545 /// NM_003546 ///

NM_003548 /// NM_021968 /// NM_175054

232412_at 1.14 down 3.80 down CDNA: FLJ21037 fis, clone CAE10055

1558953_s_at 3.14 down 3.81 down CEP164 centrosomal protein 164kDa NM_014956

225086_at 4.11 down 3.82 down FAM98B Family with sequence similarity 98, member B NM_001042429 /// NM_173611

1557049_at 3.26 down 3.83 down LOC149478 Hypothetical protein LOC149478 XM_001725220 /// XM_001725874 /// XM_001726015

224480_s_at 3.49 down 3.85 down AGPAT9 1-acylglycerol-3-phosphate O-acyltransferase 9 NM_032717

1557487_at 4.62 down 3.88 down CDNA clone IMAGE:4797099

223823_at 1.88 down 3.89 down KCNMB2

potassium large conductance calcium-activated channel, subfamily M, beta

member 2 NM_005832 /// NM_181361

231399_at 2.21 down 3.90 down RAB3IP RAB3A interacting protein (rabin3)

NM_001024647 /// NM_022456 /// NM_175623 ///

NM_175624 /// NM_175625

239973_at 3.44 down 3.94 down Transcribed locus

240217_s_at 1.55 down 3.97 down Transcribed locus

242214_at 3.23 down 3.97 down

LOC100134475 ///

LOC388720 ///

LOC643358 ///

LOC728590 /// RPS27A

/// UBB /// UBC

ribosomal protein S27a /// ubiquitin B /// ubiquitin C /// similar to ubiquitin ///

similar to rCG23287 /// hypothetical LOC100134475

NM_002954 /// NM_018955 /// NM_021009 /// XM_001127860

/// XM_001131826 /// XM_001722459 /// XM_001725160 ///

XM_001725667 /// XM_371330 /// XR_017145 /// XR_019408

/// XR_038953 /// XR_039789

228853_at 3.15 down 3.99 down LOC730432 /// STYX

serine/threonine/tyrosine interacting protein /// similar to

serine/threonine/tyrosine interacting protein NM_145251 /// XM_001125680

222476_at 3.46 down 4.01 down CNOT6 CCR4-NOT transcription complex, subunit 6 NM_015455

1554114_s_at 2.89 down 4.02 down SSH2 slingshot homolog 2 (Drosophila) NM_033389

213478_at 4.19 down 4.04 down RP1-21O18.1 kazrin

NM_001017999 /// NM_001018000 /// NM_001018001 ///

NM_015209 /// NM_201628

1557984_s_at 2.87 down 4.06 down RPAP3 RNA polymerase II associated protein 3 NM_024604

223065_s_at 3.21 down 4.11 down STARD3NL STARD3 N-terminal like NM_032016

230958_s_at 3.48 down 4.25 down Transcribed locus

1559776_at 2.89 down 4.26 down CDNA FLJ36989 fis, clone BRACE2006753

218074_at 4.31 down 4.29 down FAM96B family with sequence similarity 96, member B NM_016062

216450_x_at 3.79 down 4.30 down HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 NM_003299

224833_at 4.11 down 4.43 down ETS1 v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) NM_005238

233613_x_at 1.65 down 4.50 down REXO2 REX2, RNA exonuclease 2 homolog (S. cerevisiae) NM_015523

229640_x_at 5.18 down 4.51 down CDNA FLJ26856 fis, clone PRS08123

202118_s_at 4.98 down 4.52 down CPNE3 copine III NM_003909

219188_s_at 4.78 down 4.55 down MACROD1 MACRO domain containing 1 NM_014067

1556301_at 2.02 down 4.55 down CDNA clone IMAGE:5288145

229327_s_at 3.57 down 4.73 down Transcribed locus

AFFX-HSAC07/X00351_5_at 5.10 down 4.74 down ACTB actin, beta NM_001101

217662_x_at 1.67 down 4.75 down Transcribed locus

221011_s_at 5.44 down 4.76 down LBH limb bud and heart development homolog (mouse) NM_030915

214334_x_at 3.86 down 4.81 down DAZAP2 DAZ associated protein 2 NM_014764

212263_at 5.13 down 4.89 down QKI quaking homolog, KH domain RNA binding (mouse) NM_006775 /// NM_206853 /// NM_206854 /// NM_206855

227277_at 4.68 down 5.01 down CDNA FLJ41088 fis, clone ASTRO2002459

235890_at 2.27 down 5.03 down Transcribed locus

222891_s_at 3.89 down 5.04 down BCL11A B-cell CLL/lymphoma 11A (zinc finger protein) NM_018014 /// NM_022893 /// NM_138559

216449_x_at 3.06 down 5.10 down HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 NM_003299

221478_at 3.80 down 5.10 down BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like NM_004331

Page 16: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

228834_at 4.57 down 5.50 down TOB1 transducer of ERBB2, 1 NM_005749

236235_at 2.14 down 5.59 down ITCH Itchy E3 ubiquitin protein ligase homolog (mouse) NM_031483

236350_at 2.71 down 6.07 down Transcribed locus

212009_s_at 5.45 down 6.77 down STIP1 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein) NM_006819

204866_at 6.08 down 6.82 down PHF16 PHD finger protein 16 NM_001077445 /// NM_014735

243166_at 4.96 down 6.85 down SLC30A5 solute carrier family 30 (zinc transporter), member 5 NM_022902 /// NM_024055

213872_at 4.97 down 7.69 down

Transcribed locus, strongly similar to NP_001017510.1 hypothetical protein

LOC498750 [Rattus norvegicus]

228498_at 2.65 down 8.29 down

Transcribed locus, strongly similar to XP_531236.1 PREDICTED: hypothetical

protein [Pan troglodytes]

225070_at 6.78 down 8.88 down NUS1 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) NM_138459

217294_s_at 12.62 down 16.01 down ENO1 enolase 1, (alpha) NM_001428

228173_at 2.19 down 1.00 up GNAS GNAS complex locus

NM_000516 /// NM_001077488 /// NM_001077489 ///

NM_001077490 /// NM_016592 /// NM_080425 ///

NM_080426 /// NR_003259

230060_at 2.29 down 1.01 up CDCA7 cell division cycle associated 7 NM_031942 /// NM_145810

238089_at 2.01 down 1.02 up MAN2C1 mannosidase, alpha, class 2C, member 1 NM_006715

233391_at 2.23 down 1.02 up CDH26 cadherin-like 26 NM_021810 /// NM_177980

201991_s_at 2.51 down 1.02 up KIF5B kinesin family member 5B NM_004521

204451_at 2.59 down 1.03 up FZD1 frizzled homolog 1 (Drosophila) NM_003505

207199_at 2.47 down 1.04 up TERT telomerase reverse transcriptase NM_198253 /// NM_198255

226034_at 2.19 down 1.05 up Homo sapiens, clone IMAGE:3881549, mRNA

1554619_at 2.46 down 1.07 up LOC153364 similar to metallo-beta-lactamase superfamily protein NM_203406

244145_at 2.03 down 1.07 up Transcribed locus

200842_s_at 2.51 down 1.07 up EPRS glutamyl-prolyl-tRNA synthetase NM_004446

236302_at 2.18 down 1.10 up PPM1E protein phosphatase 1E (PP2C domain containing) NM_014906

1553960_at 2.20 down 1.12 up SNX21 sorting nexin family member 21

NM_001042632 /// NM_001042633 /// NM_033421 ///

NM_152897

208144_s_at 2.43 down 1.22 up

244347_at 2.49 down 1.23 up Transcribed locus

222667_s_at 2.15 down 1.31 up ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) NM_018489

228492_at 1.11 down 2.16 up

LOC100130216 ///

USP9Y

ubiquitin specific peptidase 9, Y-linked (fat facets-like, Drosophila) ///

hypothetical protein LOC100130216 NM_004654 /// XM_001713696

226745_at 1.02 down 2.30 up CYP4V2 cytochrome P450, family 4, subfamily V, polypeptide 2 NM_207352

230729_at 2.02 down Transcribed locus, strongly similar to NP_003391.1 exportin 1 [Homo sapiens]

237451_x_at 2.04 down Transcribed locus

237062_at 2.04 down Transcribed locus

235744_at 2.05 down PPTC7 PTC7 protein phosphatase homolog (S. cerevisiae) NM_139283

211424_x_at 2.06 down METTL7A methyltransferase like 7A NM_014033

229140_at 2.06 down ZNF579 zinc finger protein 579 NM_152600

1553108_at 2.10 down C5orf24 chromosome 5 open reading frame 24 NM_152409

232816_s_at 2.13 down

DDX11 /// DDX12 ///

LOC642846

DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase

homolog, S. cerevisiae) /// DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12

(CHL1-like helicase homolog, S. cerevisiae) /// DEAD/H (Asp-Glu-Ala-Asp/His)

box polypeptide 11-like

NM_004399 /// NM_030653 /// NM_152438 /// XM_001716130

/// XM_495908 /// XM_931833 /// XR_017754 /// XR_041429

243219_x_at 2.19 down MRPL50 Mitochondrial ribosomal protein L50 NM_019051

215392_at 2.20 down CDNA FLJ14136 fis, clone MAMMA1002744

214786_at 2.21 down MAP3K1 mitogen-activated protein kinase kinase kinase 1 NM_005921

215917_at 2.22 down SNPH syntaphilin NM_014723

229713_at 2.23 down

Transcribed locus, strongly similar to XP_001145575.1 PREDICTED:

hypothetical protein [Pan troglodytes]

217715_x_at 2.25 down

210678_s_at 2.25 down AGPAT2

1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid

acyltransferase, beta) NM_001012727 /// NM_006412

243451_at 2.29 down Transcribed locus

1554328_at 2.37 down STXBP4 syntaxin binding protein 4 NM_178509

225746_at 2.38 down RAB11FIP4 RAB11 family interacting protein 4 (class II) NM_032932

229511_at 2.49 down SMARCE1

SWI/SNF related, matrix associated, actin dependent regulator of chromatin,

subfamily e, member 1 NM_003079

235217_at 2.54 down CDNA clone IMAGE:5302680

241484_x_at 2.60 down

217204_at 2.66 down MTRF1L Mitochondrial translational release factor 1-like NM_001114184 /// NM_019041

234975_at 2.74 down

CDNA FLJ39067 fis, clone NT2RP7014910 /// CDNA FLJ38048 fis, clone

CTONG2014264

1560204_at 4.59 down NT5DC4 5'-nucleotidase domain containing 4 XM_001715677 /// XM_001716359 /// XM_001716541

223984_s_at 5.39 down NUPL1 nucleoporin like 1 NM_001008564 /// NM_001008565 /// NM_014089

228143_at 2.52 up 1.01 down CP /// LOC100132553 ceruloplasmin (ferroxidase) /// similar to Ceruloplasmin precursor (Ferroxidase) NM_000096 /// XR_038870 /// XR_038875 /// XR_038881

210105_s_at 2.03 up 1.02 down FYN FYN oncogene related to SRC, FGR, YES NM_002037 /// NM_153047 /// NM_153048

207014_at 2.44 up 1.03 down GABRA2 gamma-aminobutyric acid (GABA) A receptor, alpha 2 NM_000807 /// NM_001114175

239891_x_at 2.72 up 1.04 down RAB12 RAB12, member RAS oncogene family NM_001025300

239380_at 2.95 up 1.09 down C5orf27 chromosome 5 open reading frame 27

XR_040298 /// XR_040299 /// XR_040300 /// XR_040301 ///

XR_040302 /// XR_040303

216383_at 2.12 up 1.11 down

LOC285053 ///

LOC390354 /// RPL18A

ribosomal protein L18a /// similar to ribosomal protein L18a /// ribosomal

protein L18a pseudogene

NM_000980 /// NR_001593 /// XM_001725506 ///

XM_001725508 /// XM_208281 /// XM_934020 /// XM_941835

/// XM_945469 /// XR_042140 /// XR_042141

235472_at 2.13 up 1.11 down FUT10 fucosyltransferase 10 (alpha (1,3) fucosyltransferase) NM_032664

241910_x_at 2.13 up 1.18 down LOC400590 hypothetical LOC400590 XR_042032 /// XR_042033 /// XR_042034

Page 17: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

225542_at 1.03 up 2.00 down CENTB5 centaurin, beta 5 NM_030649

214066_x_at 1.06 up 2.03 down NPR2

natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide

receptor B) NM_003995

236796_at 1.02 up 2.03 down BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 NM_021813

240088_at 1.76 up 2.03 down PDE5A phosphodiesterase 5A, cGMP-specific NM_001083 /// NM_033430 /// NM_033437

233495_at 1.07 up 2.04 down EXOSC3 /// SHB Src homology 2 domain containing adaptor protein B /// exosome component 3 NM_001002269 /// NM_003028 /// NM_016042

208733_at 1.12 up 2.04 down RAB2A RAB2A, member RAS oncogene family NM_002865

226400_at 1.04 up 2.04 down CDC42 Cell division cycle 42 (GTP binding protein, 25kDa) NM_001039802 /// NM_001791 /// NM_044472

1566764_at 1.11 up 2.05 down 7A5 putative binding protein 7a5 NM_182762

238515_at 1.28 up 2.06 down CDNA FLJ34034 fis, clone FCBBF2004671

227621_at 1.24 up 2.06 down Transcribed locus

229905_at 1.06 up 2.06 down RAP1GDS1 RAP1, GTP-GDP dissociation stimulator 1

NM_001100426 /// NM_001100427 /// NM_001100428 ///

NM_001100429 /// NM_001100430 /// NM_021159

221349_at 1.08 up 2.09 down VPREB1 pre-B lymphocyte gene 1 NM_007128

216659_at 1.18 up 2.13 down LOC1720 dihydrofolate reductase pseudogene

232681_at 1.38 up 2.19 down CDNA: FLJ23242 fis, clone COL01514

223661_at 1.10 up 2.28 down

LOC100130123 ///

NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 /// PRO2870

NM_022731 /// XM_001724068 /// XM_001724822 ///

XM_001726844

243783_at 1.32 up 2.33 down CDNA FLJ36183 fis, clone TESTI2026854

222803_at 1.06 up 2.34 down PRTFDC1 phosphoribosyl transferase domain containing 1 NM_020200

242442_x_at 1.35 up 2.36 down RG9MTD2 RNA (guanine-9-) methyltransferase domain containing 2 NM_152292

234685_x_at 1.10 up 2.48 down KRTAP4-9 keratin associated protein 4-9 XM_001715848 /// XM_001716829

230233_at 1.08 up 2.55 down Transcribed locus

1558048_x_at 1.32 up 2.70 down

1559293_x_at 1.14 up 2.82 down C9orf14 Chromosome 9 open reading frame 14 XM_376821 /// XM_938938

238057_at 2.12 up 1.01 up USP45 ubiquitin specific peptidase 45 NM_001080481

205688_at 2.08 up 1.01 up TFAP4 transcription factor AP-4 (activating enhancer binding protein 4) NM_003223

244467_at 2.71 up 1.01 up C22:CTA-250D10.9 transmembrane protein 46-like XM_496530 /// XM_940479

209312_x_at 2.33 up 1.05 up

hCG_1998957 /// HLA-

DQB1 /// HLA-DQB2 ///

HLA-DRB1 /// HLA-

DRB2 /// HLA-DRB3 ///

HLA-DRB4 /// HLA-

DRB5 /// LOC100133484

/// LOC100133583 ///

LOC100133661 ///

LOC100133811 ///

LOC730415 /// RNASE2

/// ZNF749

major histocompatibility complex, class II, DQ beta 1 /// major

histocompatibility complex, class II, DQ beta 2 /// major histocompatibility

complex, class II, DR beta 1 /// major histocompatibility complex, class II, DR

beta 2 (pseudogene) /// major histocompatibility complex, class II, DR beta 3 ///

major histocompatibility complex, class II, DR beta 4 /// major histocompatibility

complex, class II, DR beta 5 /// ribonuclease, RNase A family, 2 (liver,

eosinophil-derived neurotoxin) /// zinc finger protein 749 /// hypothetical protein

LOC730415 /// similar to Major histocompatibility complex, class II, DR beta 4

/// similar to major histocompatibility complex, class II, DQ beta 1 /// similar to

HLA class II histocompatibility antigen, DR-W53 beta chain /// similar to

hCG1992647

NM_001023561 /// NM_002123 /// NM_002124 ///

NM_002125 /// NM_002934 /// NM_021983 /// NM_022555 ///

NR_003937 /// XM_001124749 /// XM_001713857 ///

XM_001713867 /// XM_001714067 /// XM_001714074 ///

XM_001718754 /// XM_001719473 /// XM_001720834 ///

XM_001720835 /// XM_001720843 /// XM_001722124 ///

XM_001722127 /// XM_001722253 /// XM_001723414 ///

XM_001723417 /// XM_001723419 /// XM_001723447

1558450_at 2.06 up 1.05 up A2M alpha-2-macroglobulin NM_000014

209475_at 2.00 up 1.05 up USP15 ubiquitin specific peptidase 15 NM_006313

232831_at 2.30 up 1.05 up CDNA FLJ11910 fis, clone HEMBB1000113

215193_x_at 2.00 up 1.06 up

hCG_1998957 /// HLA-

DQB1 /// HLA-DQB2 ///

HLA-DRB1 /// HLA-

DRB2 /// HLA-DRB3 ///

HLA-DRB4 /// HLA-

DRB5 /// LOC100133484

/// LOC100133583 ///

LOC100133661 ///

LOC100133811 ///

LOC730415 /// RNASE2

/// ZNF749

major histocompatibility complex, class II, DQ beta 1 /// major

histocompatibility complex, class II, DQ beta 2 /// major histocompatibility

complex, class II, DR beta 1 /// major histocompatibility complex, class II, DR

beta 2 (pseudogene) /// major histocompatibility complex, class II, DR beta 3 ///

major histocompatibility complex, class II, DR beta 4 /// major histocompatibility

complex, class II, DR beta 5 /// ribonuclease, RNase A family, 2 (liver,

eosinophil-derived neurotoxin) /// zinc finger protein 749 /// hypothetical protein

LOC730415 /// similar to Major histocompatibility complex, class II, DR beta 4

/// similar to major histocompatibility complex, class II, DQ beta 1 /// similar to

HLA class II histocompatibility antigen, DR-W53 beta chain /// similar to

hCG1992647

NM_001023561 /// NM_002123 /// NM_002124 ///

NM_002125 /// NM_002934 /// NM_021983 /// NM_022555 ///

NR_003937 /// XM_001124749 /// XM_001713857 ///

XM_001713867 /// XM_001714067 /// XM_001714074 ///

XM_001718754 /// XM_001719473 /// XM_001720834 ///

XM_001720835 /// XM_001720843 /// XM_001722124 ///

XM_001722127 /// XM_001722253 /// XM_001723414 ///

XM_001723417 /// XM_001723419 /// XM_001723447

235497_at 2.31 up 1.06 up LOC643837 hypothetical LOC643837 NR_015368 /// XM_927114 /// XM_936770

231701_s_at 2.00 up 1.07 up SHMT1 Serine hydroxymethyltransferase 1 (soluble) NM_004169 /// NM_148918

1552930_at 2.05 up 1.08 up MMEL1 membrane metallo-endopeptidase-like 1 NM_033467

226551_at 2.08 up 1.09 up RIPK1 receptor (TNFRSF)-interacting serine-threonine kinase 1 NM_003804

206830_at 2.01 up 1.10 up SLC4A10 solute carrier family 4, sodium bicarbonate transporter-like, member 10 NM_022058

227769_at 2.13 up 1.10 up Transcribed locus

206271_at 2.00 up 1.12 up TLR3 toll-like receptor 3 NM_003265

230795_at 2.51 up 1.12 up Transcribed locus

223218_s_at 2.17 up 1.16 up NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta NM_001005474 /// NM_031419

202990_at 2.03 up 1.17 up PYGL phosphorylase, glycogen; liver (Hers disease, glycogen storage disease type VI) NM_002863

207687_at 2.22 up 1.18 up INHBC inhibin, beta C NM_005538

203879_at 2.14 up 1.20 up PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide NM_005026

1554518_at 2.44 up 1.21 up GSTCD glutathione S-transferase, C-terminal domain containing NM_001031720 /// NM_024751

210148_at 2.24 up 1.22 up HIPK3 homeodomain interacting protein kinase 3 NM_001048200 /// NM_005734

211990_at 2.26 up 1.23 up HLA-DPA1 major histocompatibility complex, class II, DP alpha 1 NM_033554

226017_at 2.07 up 1.23 up CMTM7 CKLF-like MARVEL transmembrane domain containing 7 NM_138410 /// NM_181472

206090_s_at 2.35 up 1.24 up DISC1 disrupted in schizophrenia 1

NM_001012957 /// NM_001012958 /// NM_001012959 ///

NM_018662

242338_at 2.06 up 1.25 up TMEM64 transmembrane protein 64 NM_001008495

207064_s_at 2.09 up 1.25 up AOC2 amine oxidase, copper containing 2 (retina-specific) NM_001158 /// NM_009590

236608_at 2.22 up 1.27 up GPR113 G protein-coupled receptor 113 NM_153835

Page 18: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

1405_i_at 3.25 up 1.27 up CCL5 chemokine (C-C motif) ligand 5 NM_002985

1554390_s_at 2.10 up 1.28 up ACTR2 ARP2 actin-related protein 2 homolog (yeast) NM_001005386 /// NM_005722

242123_at 2.23 up 1.29 up PAQR7 progestin and adipoQ receptor family member VII NM_178422

219770_at 2.19 up 1.30 up GTDC1 glycosyltransferase-like domain containing 1 NM_001006636 /// NM_024659

232781_at 2.35 up 1.32 up CDNA: FLJ22769 fis, clone KAIA1316

204781_s_at 2.28 up 1.33 up FAS Fas (TNF receptor superfamily, member 6)

NM_000043 /// NM_152871 /// NM_152872 /// NM_152873 ///

NM_152874 /// NM_152875 /// NM_152876 /// NM_152877

227631_at 2.16 up 1.34 up LOC100133283 Hypothetical protein LOC100133283 XM_001716973 /// XM_001717429

232229_at 2.29 up 1.34 up SETX senataxin NM_015046

237052_x_at 2.05 up 1.35 up GIGYF2 GRB10 interacting GYF protein 2

NM_001103146 /// NM_001103147 /// NM_001103148 ///

NM_015575

210873_x_at 2.49 up 1.35 up APOBEC3A apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A NM_145699

1570198_x_at 2.27 up 1.36 up

Transcribed locus, strongly similar to XP_512490.2 PREDICTED:

plasmalemma vesicle associated protein [Pan troglodytes]

225974_at 2.02 up 1.37 up TMEM64 transmembrane protein 64 NM_001008495

215972_at 2.06 up 1.39 up CDNA FLJ38449 fis, clone FEBRA2019389

205993_s_at 2.18 up 1.39 up TBX2 T-box 2 NM_005994

220039_s_at 2.05 up 1.39 up CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 NM_017774

217347_at 2.28 up 1.42 up

205575_at 2.02 up 1.42 up C1QL1 complement component 1, q subcomponent-like 1 NM_006688

238060_s_at 2.44 up 1.42 up B4GALNT4 Beta-1,4-N-acetyl-galactosaminyl transferase 4 NM_178537

206507_at 2.33 up 1.42 up ZSCAN12 zinc finger and SCAN domain containing 12 XR_041200 /// XR_041201 /// XR_041202

239603_x_at 2.23 up 1.43 up

213222_at 2.02 up 1.43 up PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) NM_015192 /// NM_182734

224826_at 2.20 up 1.43 up RP5-1022P6.2 hypothetical protein KIAA1434 NM_019593

226511_at 2.20 up 1.44 up WDR32 WD repeat domain 32 NM_024345

218498_s_at 2.13 up 1.45 up ERO1L ERO1-like (S. cerevisiae) NM_014584

217478_s_at 2.32 up 1.46 up HLA-DMA major histocompatibility complex, class II, DM alpha NM_006120

1554679_a_at 2.06 up 1.46 up LAPTM4B lysosomal associated protein transmembrane 4 beta NM_018407

224633_s_at 2.57 up 1.46 up GPATCH4 G patch domain containing 4 NM_015590 /// NM_182679

201943_s_at 2.19 up 1.47 up CPD carboxypeptidase D NM_001304

207152_at 2.28 up 1.48 up NTRK2 neurotrophic tyrosine kinase, receptor, type 2

NM_001007097 /// NM_001018064 /// NM_001018065 ///

NM_001018066 /// NM_006180

203920_at 2.05 up 1.48 up NR1H3 nuclear receptor subfamily 1, group H, member 3 NM_005693

1567224_at 2.59 up 1.49 up HMGA2 high mobility group AT-hook 2 NM_003483 /// NM_003484

227133_at 2.10 up 1.49 up CXorf39 chromosome X open reading frame 39 NM_207318

1553831_at 2.19 up 1.50 up APOBEC3D apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D NM_152426

235331_x_at 2.13 up 1.50 up PCGF5 polycomb group ring finger 5 NM_032373

219237_s_at 2.14 up 1.50 up DNAJB14 DnaJ (Hsp40) homolog, subfamily B, member 14 NM_001031723 /// NM_024920

226252_at 2.60 up 1.52 up CDNA FLJ34585 fis, clone KIDNE2008758

204256_at 2.00 up 1.52 up ELOVL6

ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2,

SUR4/Elo3-like, yeast) NM_024090

223374_s_at 2.20 up 1.53 up B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)

NM_001038628 /// NM_003781 /// NM_033167 ///

NM_033168 /// NM_033169

208121_s_at 2.57 up 1.54 up PTPRO protein tyrosine phosphatase, receptor type, O

NM_002848 /// NM_030667 /// NM_030668 /// NM_030669 ///

NM_030670 /// NM_030671

229002_at 2.10 up 1.55 up FAM69B family with sequence similarity 69, member B NM_152421

231251_at 2.67 up 1.55 up WIPF2 WAS/WASL interacting protein family, member 2 NM_133264

216835_s_at 2.12 up 1.55 up DOK1 docking protein 1, 62kDa (downstream of tyrosine kinase 1) NM_001381

217744_s_at 2.16 up 1.56 up PERP PERP, TP53 apoptosis effector NM_022121

215944_at 2.10 up 1.57 up

225415_at 2.32 up 1.58 up DTX3L deltex 3-like (Drosophila) NM_138287

208217_at 2.29 up 1.58 up GABRR2 gamma-aminobutyric acid (GABA) receptor, rho 2 NM_002043

205600_x_at 2.18 up 1.59 up HOXB5 homeobox B5 NM_002147

220346_at 2.14 up 1.59 up MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like NM_001004346

235456_at 2.03 up 1.59 up CDNA clone IMAGE:4819084

210771_at 2.00 up 1.60 up PPARA peroxisome proliferator-activated receptor alpha NM_001001928 /// NM_005036

241866_at 2.09 up 1.60 up SLC16A7 solute carrier family 16, member 7 (monocarboxylic acid transporter 2) NM_004731

202609_at 2.33 up 1.60 up EPS8 epidermal growth factor receptor pathway substrate 8 NM_004447

236576_at 2.09 up 1.60 up Transcribed locus

1558202_at 2.22 up 1.61 up LOC145783 hypothetical LOC145783 XM_934388

217921_at 2.08 up 1.61 up MAN1A2 mannosidase, alpha, class 1A, member 2 NM_006699

243299_at 2.03 up 1.61 up Transcribed locus

225271_at 2.02 up 1.61 up TMEM63B transmembrane protein 63B NM_018426

212014_x_at 2.07 up 1.61 up CD44 CD44 molecule (Indian blood group)

NM_000610 /// NM_001001389 /// NM_001001390 ///

NM_001001391 /// NM_001001392

218439_s_at 2.15 up 1.61 up COMMD10 COMM domain containing 10 NM_016144

209536_s_at 2.17 up 1.61 up EHD4 EH-domain containing 4 NM_139265

1570033_at 2.37 up 1.61 up WIPI2 WD repeat domain, phosphoinositide interacting 2

NM_001033518 /// NM_001033519 /// NM_001033520 ///

NM_015610 /// NM_016003

201722_s_at 2.05 up 1.62 up GALNT1

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-

acetylgalactosaminyltransferase 1 (GalNAc-T1) NM_020474

207920_x_at 2.34 up 1.62 up ZFX zinc finger protein, X-linked NM_003410

241719_at 2.27 up 1.62 up Transcribed locus

227979_at 2.16 up 1.63 up CDNA FLJ36727 fis, clone UTERU2012286

210286_s_at 2.65 up 1.63 up SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 NM_003615

218018_at 2.13 up 1.63 up PDXK pyridoxal (pyridoxine, vitamin B6) kinase NM_003681

236227_at 2.09 up 1.64 up TMEM161B transmembrane protein 161B NM_153354

Page 19: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

210117_at 2.18 up 1.64 up SPAG1 sperm associated antigen 1 NM_003114 /// NM_172218

1007_s_at 2.03 up 1.64 up DDR1 discoidin domain receptor tyrosine kinase 1 NM_001954 /// NM_013993 /// NM_013994

242938_s_at 2.52 up 1.64 up FOXK2 forkhead box K2 NM_004514

1558249_s_at 2.26 up 1.65 up STX16 syntaxin 16 NM_001001433 /// NM_003763

226647_at 2.36 up 1.65 up TMEM25 transmembrane protein 25 NM_032780

234490_at 2.05 up 1.65 up CDNA: FLJ20910 fis, clone ADSE00492

228151_at 2.23 up 1.65 up Transcribed locus

220945_x_at 2.78 up 1.66 up MANSC1 MANSC domain containing 1 NM_018050

222026_at 2.34 up 1.66 up RBM3 RNA binding motif (RNP1, RRM) protein 3 NM_006743

242592_at 2.02 up 1.66 up GPR137C G protein-coupled receptor 137C NM_001099652

233246_at 2.47 up 1.67 up HSPC090

218769_s_at 2.07 up 1.67 up ANKRA2 ankyrin repeat, family A (RFXANK-like), 2 NM_023039

202647_s_at 2.10 up 1.68 up NRAS neuroblastoma RAS viral (v-ras) oncogene homolog NM_002524

207939_x_at 2.10 up 1.69 up RNPS1 RNA binding protein S1, serine-rich domain NM_006711 /// NM_080594

236402_at 2.26 up 1.69 up CDNA FLJ42263 fis, clone TKIDN2014570

215357_s_at 2.08 up 1.69 up POLDIP3 polymerase (DNA-directed), delta interacting protein 3 NM_032311 /// NM_178136

214058_at 2.03 up 1.69 up MYCL1

v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived

(avian) NM_001033081 /// NM_001033082 /// NM_005376

235556_at 2.46 up 1.70 up Transcribed locus

204286_s_at 2.22 up 1.71 up PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 NM_021127

1555326_a_at 2.01 up 1.71 up ADAM9 ADAM metallopeptidase domain 9 (meltrin gamma) NM_001005845 /// NM_003816

201473_at 2.02 up 1.71 up JUNB jun B proto-oncogene NM_002229

218196_at 3.11 up 1.71 up OSTM1 osteopetrosis associated transmembrane protein 1 NM_014028

228063_s_at 2.28 up 1.72 up NAP1L5 nucleosome assembly protein 1-like 5 NM_153757

212394_at 2.25 up 1.73 up KIAA0090 KIAA0090 NM_015047

219543_at 2.29 up 1.73 up PBLD phenazine biosynthesis-like protein domain containing NM_001033083 /// NM_022129

236704_at 2.88 up 1.73 up MRNA; cDNA DKFZp686N0886 (from clone DKFZp686N0886)

235276_at 2.07 up 1.73 up EPSTI1 Epithelial stromal interaction 1 (breast) NM_001002264 /// NM_033255

205884_at 2.12 up 1.73 up ITGA4 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) NM_000885

207901_at 2.51 up 1.73 up IL12B

interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte

maturation factor 2, p40) NM_002187

240015_at 2.72 up 1.74 up Transcribed locus

214039_s_at 2.55 up 1.74 up LAPTM4B lysosomal associated protein transmembrane 4 beta NM_018407

230050_at 2.37 up 1.75 up BTBD14A BTB (POZ) domain containing 14A NM_144653

215719_x_at 3.07 up 1.76 up FAS Fas (TNF receptor superfamily, member 6)

NM_000043 /// NM_152871 /// NM_152872 /// NM_152873 ///

NM_152874 /// NM_152875 /// NM_152876 /// NM_152877

1553378_a_at 2.23 up 1.76 up C17orf66 chromosome 17 open reading frame 66 NM_152781

1556162_at 2.28 up 1.76 up IGSF3 immunoglobulin superfamily, member 3 NM_001007237 /// NM_001542

209541_at 2.12 up 1.76 up IGF1 insulin-like growth factor 1 (somatomedin C)

NM_000618 /// NM_001111283 /// NM_001111284 ///

NM_001111285

1560762_at 2.11 up 1.76 up LOC285972 hypothetical protein LOC285972

204285_s_at 2.35 up 1.76 up PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 NM_021127

241007_at 2.01 up 1.76 up Transcribed locus

231944_at 2.01 up 1.77 up ERO1LB ERO1-like beta (S. cerevisiae) NM_019891

210841_s_at 2.02 up 1.77 up NRP2 neuropilin 2

NM_003872 /// NM_018534 /// NM_201264 /// NM_201266 ///

NM_201267 /// NM_201279

244609_at 2.04 up 1.77 up Transcribed locus

221824_s_at 2.54 up 1.77 up 9-Mar membrane-associated ring finger (C3HC4) 8 NM_001002265 /// NM_001002266 /// NM_145021

235051_at 2.08 up 1.77 up CCDC50 coiled-coil domain containing 50 NM_174908 /// NM_178335

231240_at 2.50 up 1.77 up DIO2 deiodinase, iodothyronine, type II NM_000793 /// NM_001007023 /// NM_013989

37512_at 2.02 up 1.78 up HSD17B6 hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse) NM_003725

1562275_at 2.67 up 1.78 up Transcribed locus

225847_at 2.24 up 1.78 up AADACL1 arylacetamide deacetylase-like 1 NM_020792

236799_at 2.01 up 1.78 up Transcribed locus

207347_at 2.07 up 1.78 up ERCC6

excision repair cross-complementing rodent repair deficiency, complementation

group 6 NM_000124

231093_at 2.20 up 1.78 up FCRL3 Fc receptor-like 3 NM_052939

228091_at 2.54 up 1.78 up STX17 syntaxin 17 NM_017919

206553_at 2.19 up 1.79 up OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa NM_001032731 /// NM_002535 /// NM_016817

244016_at 3.18 up 1.79 up Transcribed locus

204211_x_at 2.33 up 1.79 up EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 NM_002759

235856_at 2.48 up 1.80 up

Transcribed locus, moderately similar to XP_001162191.1 PREDICTED:

complement component 4A isoform 2 [Pan troglodytes]

201334_s_at 2.04 up 1.80 up ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 NM_015313

228309_at 2.13 up 1.80 up

203368_at 2.05 up 1.81 up CRELD1 cysteine-rich with EGF-like domains 1 NM_001031717 /// NM_001077415 /// NM_015513

1568678_s_at 2.02 up 1.81 up FGFR1OP FGFR1 oncogene partner NM_007045 /// NM_194429

235736_at 2.09 up 1.81 up Homo sapiens, clone IMAGE:5167600, mRNA

206002_at 2.10 up 1.82 up GPR64 G protein-coupled receptor 64

NM_001079858 /// NM_001079859 /// NM_001079860 ///

NM_005756

235026_at 2.13 up 1.82 up FLJ32549 hypothetical protein FLJ32549 NM_152440

216179_x_at 2.06 up 1.83 up CDNA: FLJ23520 fis, clone LNG04926

1554894_a_at 2.25 up 1.84 up PCBD2

pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte

nuclear factor 1 alpha (TCF1) 2 NM_032151

231008_at 3.20 up 1.85 up UNC5CL Unc-5 homolog C (C. elegans)-like NM_173561

228846_at 2.23 up 1.85 up MXD1 MAX dimerization protein 1 NM_002357

235258_at 2.57 up 1.85 up DCP2 DCP2 decapping enzyme homolog (S. cerevisiae) NM_152624

1559265_at 2.17 up 1.85 up C10orf140 chromosome 10 open reading frame 140 NM_207371

Page 20: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

211042_x_at 2.22 up 1.85 up MCAM melanoma cell adhesion molecule NM_006500

228956_at 2.63 up 1.85 up UGT8 UDP glycosyltransferase 8 (UDP-galactose ceramide galactosyltransferase) NM_003360

219562_at 2.20 up 1.85 up RAB26 RAB26, member RAS oncogene family NM_014353

224199_at 2.13 up 1.85 up DKK2 dickkopf homolog 2 (Xenopus laevis) NM_014421

243894_at 2.09 up 1.86 up SLC41A2 solute carrier family 41, member 2 NM_032148

209126_x_at 2.20 up 1.87 up KRT6B keratin 6B NM_005555

201059_at 2.01 up 1.87 up CTTN cortactin NM_005231 /// NM_138565

207181_s_at 2.15 up 1.87 up CASP7 caspase 7, apoptosis-related cysteine peptidase NM_001227 /// NM_033338 /// NM_033339 /// NM_033340

211123_at 2.51 up 1.88 up SLC5A5 solute carrier family 5 (sodium iodide symporter), member 5 NM_000453

218801_at 2.09 up 1.88 up UGCGL2 UDP-glucose ceramide glucosyltransferase-like 2 NM_020121

1556284_at 2.20 up 1.89 up PPA2 Pyrophosphatase (inorganic) 2

NM_001034191 /// NM_006903 /// NM_176866 ///

NM_176867 /// NM_176869

239587_at 2.10 up 1.90 up Transcribed locus

214329_x_at 2.89 up 1.91 up TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 NM_003810

235220_at 2.20 up 1.91 up Transcribed locus

1555403_a_at 2.63 up 1.92 up CDH19 cadherin 19, type 2 NM_021153

215603_x_at 2.09 up 1.92 up

GGT1 /// GGT2 ///

GGT3P /// GGTLC2 ///

GGTLC3

gamma-glutamyltransferase 1 /// gamma-glutamyltransferase 3 pseudogene ///

gamma-glutamyltransferase light chain 2 /// gamma-glutamyltransferase light

chain 3 /// gamma-glutamyltransferase 2

NM_001032364 /// NM_001032365 /// NM_005265 ///

NM_013430 /// NM_199127 /// NR_003267 /// XM_001128296

/// XM_001128302 /// XM_001128310 /// XM_001129377 ///

XM_001129425 /// XR_042175

228607_at 2.68 up 1.92 up OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa NM_001032731 /// NM_002535 /// NM_016817

209954_x_at 2.06 up 1.92 up SS18 synovial sarcoma translocation, chromosome 18 NM_001007559 /// NM_005637

225285_at 2.17 up 1.92 up BCAT1 branched chain aminotransferase 1, cytosolic NM_005504

1555785_a_at 2.14 up 1.92 up XRN1 5'-3' exoribonuclease 1 NM_001042604 /// NM_019001

214022_s_at 2.93 up 1.93 up IFITM1 interferon induced transmembrane protein 1 (9-27) NM_003641

222329_x_at 2.02 up 1.93 up

1559048_at 2.07 up 1.93 up CDNA FLJ30371 fis, clone BRACE2007836

202446_s_at 2.51 up 1.93 up PLSCR1 phospholipid scramblase 1 NM_021105

222506_at 2.33 up 1.93 up LMBR1 limb region 1 homolog (mouse) NM_022458

240769_at 2.14 up 1.94 up Transcribed locus

213750_at 2.32 up 1.94 up RSL1D1 ribosomal L1 domain containing 1 NM_015659

210592_s_at 2.01 up 1.94 up SAT1 spermidine/spermine N1-acetyltransferase 1 NM_002970

244317_at 2.00 up 1.95 up KIAA1324L KIAA1324-like NM_152748

211122_s_at 8.42 up 1.95 up CXCL11 chemokine (C-X-C motif) ligand 11 NM_005409

1562827_at 3.06 up 1.95 up Homo sapiens, clone IMAGE:5167652, mRNA

237354_at 2.32 up 1.95 up PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 NM_015027

227579_at 2.30 up 1.97 up CDNA FLJ35001 fis, clone OCBBF2011887

221875_x_at 2.06 up 1.97 up HLA-F major histocompatibility complex, class I, F NM_001098478 /// NM_001098479 /// NM_018950

217933_s_at 2.13 up 1.97 up LAP3 leucine aminopeptidase 3 NM_015907

226517_at 2.39 up 1.97 up BCAT1 branched chain aminotransferase 1, cytosolic NM_005504

201347_x_at 2.12 up 1.98 up GRHPR glyoxylate reductase/hydroxypyruvate reductase NM_012203

202365_at 2.23 up 1.98 up UNC119B unc-119 homolog B (C. elegans) NM_001080533

204992_s_at 2.34 up 1.98 up PFN2 profilin 2 NM_002628 /// NM_053024

219312_s_at 2.13 up 1.99 up ZBTB10 zinc finger and BTB domain containing 10 NM_001105539 /// NM_023929

1555772_a_at 2.04 up 1.99 up CDC25A cell division cycle 25 homolog A (S. pombe) NM_001789 /// NM_201567

202182_at 1.83 up 2.00 up GCN5L2 GCN5 general control of amino-acid synthesis 5-like 2 (yeast) NM_021078

226945_at 2.45 up 2.00 up RHBDD1 rhomboid domain containing 1 NM_032276

1558460_at 1.62 up 2.00 up ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 NM_001023587 /// NM_005688

239585_at 1.32 up 2.00 up PCAF P300/CBP-associated factor NM_003884

209394_at 1.79 up 2.00 up ASMTL acetylserotonin O-methyltransferase-like NM_004192 /// XM_001713702

1555374_at 1.59 up 2.01 up

220643_s_at 1.60 up 2.01 up FAIM Fas apoptotic inhibitory molecule

NM_001033030 /// NM_001033031 /// NM_001033032 ///

NM_018147

212316_at 1.58 up 2.01 up NUP210 nucleoporin 210kDa NM_024923

224025_s_at 1.88 up 2.01 up ATG7 ATG7 autophagy related 7 homolog (S. cerevisiae) NM_006395

209921_at 2.05 up 2.01 up SLC7A11 solute carrier family 7, (cationic amino acid transporter, y+ system) member 11 NM_014331

228454_at 2.69 up 2.01 up LCOR ligand dependent nuclear receptor corepressor NM_032440

205306_x_at 2.02 up 2.01 up KMO kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) NM_003679

218543_s_at 2.78 up 2.01 up PARP12 poly (ADP-ribose) polymerase family, member 12 NM_022750

217185_s_at 1.77 up 2.01 up LOC442240 /// ZNF259 zinc finger protein 259 /// similar to zinc finger protein 259 NM_003904 /// XR_016496 /// XR_019092 /// XR_040401

236198_at 1.98 up 2.02 up Transcribed locus

202017_at 1.44 up 2.02 up EPHX1 epoxide hydrolase 1, microsomal (xenobiotic) NM_000120

221586_s_at 1.90 up 2.02 up E2F5 E2F transcription factor 5, p130-binding NM_001083588 /// NM_001083589 /// NM_001951

208767_s_at 2.40 up 2.02 up LAPTM4B lysosomal associated protein transmembrane 4 beta NM_018407

206508_at 1.79 up 2.02 up CD70 CD70 molecule NM_001252

230129_at 1.62 up 2.02 up PSTK phosphoseryl-tRNA kinase NM_153336

204044_at 1.64 up 2.02 up QPRT

quinolinate phosphoribosyltransferase (nicotinate-nucleotide pyrophosphorylase

(carboxylating)) NM_014298

203768_s_at 2.26 up 2.02 up STS steroid sulfatase (microsomal), isozyme S NM_000351

218169_at 1.69 up 2.02 up

LOC100130369 ///

VAC14 Vac14 homolog (S. cerevisiae) /// hypothetical protein LOC100130369

NM_018052 /// XM_001724197 /// XM_001724956 ///

XM_001726731

219429_at 2.56 up 2.03 up FA2H fatty acid 2-hydroxylase NM_024306

206715_at 2.04 up 2.03 up TFEC transcription factor EC NM_001018058 /// NM_012252

208774_at 2.10 up 2.03 up CSNK1D casein kinase 1, delta NM_001893 /// NM_139062

200787_s_at 1.84 up 2.03 up PEA15 phosphoprotein enriched in astrocytes 15 NM_003768

219255_x_at 2.37 up 2.03 up IL17RB interleukin 17 receptor B NM_018725

229715_at 1.91 up 2.03 up CDNA FLJ41663 fis, clone FEBRA2027297

Page 21: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

202721_s_at 1.66 up 2.03 up GFPT1 glutamine-fructose-6-phosphate transaminase 1 NM_002056

211091_s_at 1.94 up 2.03 up NF2 neurofibromin 2 (merlin)

NM_000268 /// NM_016418 /// NM_181825 /// NM_181828 ///

NM_181829 /// NM_181830 /// NM_181831 /// NM_181832 ///

NM_181833

207176_s_at 1.67 up 2.03 up CD80 CD80 molecule NM_005191

1567081_x_at 1.49 up 2.03 up CLN6 ceroid-lipofuscinosis, neuronal 6, late infantile, variant NM_017882

1568592_at 2.15 up 2.03 up TRIM69 tripartite motif-containing 69 NM_080745 /// NM_182985

220941_s_at 1.45 up 2.04 up C21orf91 chromosome 21 open reading frame 91 NM_001100420 /// NM_001100421 /// NM_017447

201189_s_at 1.73 up 2.04 up ITPR3 inositol 1,4,5-triphosphate receptor, type 3 NM_002224

215744_at 1.29 up 2.04 up FUS fusion (involved in t(12;16) in malignant liposarcoma) NM_004960

205746_s_at 2.30 up 2.04 up ADAM17

ADAM metallopeptidase domain 17 (tumor necrosis factor, alpha, converting

enzyme) NM_003183

203304_at 1.51 up 2.04 up BAMBI BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) NM_012342

219343_at 2.38 up 2.04 up CDC37L1 cell division cycle 37 homolog (S. cerevisiae)-like 1 NM_017913

201714_at 1.70 up 2.04 up TUBG1 tubulin, gamma 1 NM_001070

203789_s_at 1.78 up 2.04 up SEMA3C

sema domain, immunoglobulin domain (Ig), short basic domain, secreted,

(semaphorin) 3C NM_006379

218394_at 1.98 up 2.04 up ROGDI rogdi homolog (Drosophila) NM_024589

217931_at 1.46 up 2.05 up CNPY3 canopy 3 homolog (zebrafish) NM_006586

215530_at 1.86 up 2.05 up FANCA Fanconi anemia, complementation group A NM_000135 /// NM_001018112

244839_at 1.34 up 2.05 up TTN titin

NM_003319 /// NM_133378 /// NM_133379 /// NM_133432 ///

NM_133437

212848_s_at 1.16 up 2.05 up C9orf3 chromosome 9 open reading frame 3 NM_032823

239044_at 1.62 up 2.05 up ITFG1 Integrin alpha FG-GAP repeat containing 1 NM_030790

225103_at 1.41 up 2.05 up MRPL38 mitochondrial ribosomal protein L38 NM_032478

1568889_at 2.38 up 2.05 up FANCD2 Fanconi anemia, complementation group D2 NM_001018115 /// NM_033084

218231_at 1.50 up 2.05 up NAGK N-acetylglucosamine kinase NM_017567

1554342_s_at 1.56 up 2.05 up HEL308 DNA helicase HEL308 NM_133636

203767_s_at 2.19 up 2.05 up STS steroid sulfatase (microsomal), isozyme S NM_000351

212452_x_at 1.59 up 2.05 up MYST4 MYST histone acetyltransferase (monocytic leukemia) 4 NM_012330

207440_at 1.33 up 2.06 up SLC35A2 solute carrier family 35 (UDP-galactose transporter), member A2 NM_001032289 /// NM_001042498 /// NM_005660

212540_at 1.80 up 2.06 up CDC34 cell division cycle 34 homolog (S. cerevisiae) NM_004359

212956_at 2.03 up 2.06 up TBC1D9 TBC1 domain family, member 9 (with GRAM domain) NM_015130

212521_s_at 2.00 up 2.06 up PDE8A phosphodiesterase 8A NM_002605 /// NM_173454

200827_at 1.84 up 2.06 up

LOC100130069 ///

PLOD1

procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1 /// hypothetical protein

LOC100130069

NM_000302 /// XM_001715762 /// XM_001720424 ///

XM_001721275

210542_s_at 2.02 up 2.06 up SLCO3A1 solute carrier organic anion transporter family, member 3A1 NM_013272

207571_x_at 1.65 up 2.06 up C1orf38 chromosome 1 open reading frame 38 NM_001039477 /// NM_001105556 /// NM_004848

202218_s_at 1.35 up 2.06 up FADS2 fatty acid desaturase 2 NM_004265

203718_at 1.62 up 2.06 up PNPLA6 patatin-like phospholipase domain containing 6 NM_006702

206724_at 1.17 up 2.06 up CBX4 chromobox homolog 4 (Pc class homolog, Drosophila) NM_003655

218844_at 2.04 up 2.06 up ACSF2 acyl-CoA synthetase family member 2 NM_025149

212334_at 2.32 up 2.06 up GNS glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID) NM_002076

230657_at 1.13 up 2.06 up Transcribed locus

226858_at 1.84 up 2.06 up CSNK1E casein kinase 1, epsilon NM_001894 /// NM_152221

200935_at 1.62 up 2.06 up CALR calreticulin NM_004343

200866_s_at 1.77 up 2.06 up PSAP

prosaposin (variant Gaucher disease and variant metachromatic

leukodystrophy) NM_001042465 /// NM_001042466 /// NM_002778

212396_s_at 1.83 up 2.06 up KIAA0090 KIAA0090 NM_015047

212045_at 2.00 up 2.06 up GLG1 golgi apparatus protein 1 NM_012201

205309_at 1.88 up 2.07 up SMPDL3B sphingomyelin phosphodiesterase, acid-like 3B NM_001009568 /// NM_014474

223061_at 1.49 up 2.07 up CHID1 chitinase domain containing 1 NM_023947

202441_at 2.23 up 2.07 up ERLIN1 ER lipid raft associated 1 NM_001100626 /// NM_006459

219366_at 1.91 up 2.07 up AVEN apoptosis, caspase activation inhibitor NM_020371

211529_x_at 2.29 up 2.07 up HLA-G major histocompatibility complex, class I, G NM_002127

204806_x_at 2.39 up 2.07 up HLA-F major histocompatibility complex, class I, F NM_001098478 /// NM_001098479 /// NM_018950

204715_at 1.94 up 2.07 up PANX1 pannexin 1 NM_015368

230662_at 1.84 up 2.07 up Transcribed locus

222300_at 1.87 up 2.07 up Transcribed locus

208791_at 2.07 up 2.08 up CLU clusterin NM_001831 /// NM_203339

214179_s_at 1.80 up 2.08 up NFE2L1 nuclear factor (erythroid-derived 2)-like 1 NM_003204

209325_s_at 1.76 up 2.08 up RGS16 regulator of G-protein signaling 16 NM_002928

212146_at 1.54 up 2.08 up PLEKHM2 pleckstrin homology domain containing, family M (with RUN domain) member 2 NM_015164

218953_s_at 2.17 up 2.08 up PCYOX1L prenylcysteine oxidase 1 like NM_024028

209150_s_at 1.67 up 2.08 up TM9SF1 transmembrane 9 superfamily member 1 NM_001014842 /// NM_006405

207945_s_at 1.59 up 2.08 up CSNK1D casein kinase 1, delta NM_001893 /// NM_139062

225963_at 2.75 up 2.08 up KLHDC5 kelch domain containing 5 NM_020782

213323_s_at 2.28 up 2.08 up ZC3H7B zinc finger CCCH-type containing 7B NM_017590

232617_at 2.08 up 2.08 up CTSS cathepsin S NM_004079

224742_at 2.03 up 2.08 up ABHD12 abhydrolase domain containing 12 NM_001042472 /// NM_015600

202185_at 1.92 up 2.08 up PLOD3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 NM_001084

205195_at 1.44 up 2.09 up AP1S1 adaptor-related protein complex 1, sigma 1 subunit NM_001283 /// NM_057089

230670_at 1.57 up 2.09 up IGSF10 immunoglobulin superfamily, member 10 NM_178822

202756_s_at 2.10 up 2.09 up GPC1 glypican 1 NM_002081

202245_at 1.60 up 2.09 up LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) NM_001001438 /// NM_002340

228531_at 2.40 up 2.09 up SAMD9 sterile alpha motif domain containing 9 NM_017654

207713_s_at 1.75 up 2.10 up RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 NM_006462 /// NM_031229

204909_at 1.67 up 2.10 up DDX6 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 NM_004397

Page 22: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

202755_s_at 1.41 up 2.10 up GPC1 glypican 1 NM_002081

212195_at 2.21 up 2.10 up IL6ST interleukin 6 signal transducer (gp130, oncostatin M receptor) NM_002184 /// NM_175767

201775_s_at 2.03 up 2.10 up KIAA0494 KIAA0494 NM_014774

201561_s_at 1.71 up 2.10 up CLSTN1 calsyntenin 1 NM_001009566 /// NM_014944

201806_s_at 1.32 up 2.10 up ATXN2L ataxin 2-like

NM_007245 /// NM_145714 /// NM_148414 /// NM_148415 ///

NM_148416

226145_s_at 1.76 up 2.10 up FRAS1 Fraser syndrome 1 NM_025074

226239_at 1.80 up 2.10 up TMEM150 transmembrane protein 150 NM_001031738 /// NM_153342

210130_s_at 1.47 up 2.10 up TM7SF2 transmembrane 7 superfamily member 2 NM_003273

210464_at 3.10 up 2.10 up C8orf71 chromosome 8 open reading frame 71 XR_040850 /// XR_040851 /// XR_040852

202430_s_at 2.81 up 2.10 up PLSCR1 phospholipid scramblase 1 NM_021105

204275_at 1.66 up 2.10 up SOLH small optic lobes homolog (Drosophila) NM_005632

202897_at 2.22 up 2.10 up SIRPA signal-regulatory protein alpha NM_001040022 /// NM_001040023 /// NM_080792

218747_s_at 1.68 up 2.10 up TAPBPL TAP binding protein-like NM_018009

222569_at 2.03 up 2.10 up UGCGL1 UDP-glucose ceramide glucosyltransferase-like 1 NM_001025777 /// NM_020120

209611_s_at 1.71 up 2.10 up SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 NM_003038

224513_s_at 2.08 up 2.10 up UBQLN4 ubiquilin 4 NM_020131

232604_at 2.25 up 2.10 up ZNF541 zinc finger protein 541 XM_001716969 /// XM_001717930 /// XM_001718013

216252_x_at 2.78 up 2.11 up FAS Fas (TNF receptor superfamily, member 6)

NM_000043 /// NM_152871 /// NM_152872 /// NM_152873 ///

NM_152874 /// NM_152875 /// NM_152876 /// NM_152877

212365_at 1.80 up 2.11 up MYO1B myosin IB NM_012223

224156_x_at 2.60 up 2.11 up IL17RB interleukin 17 receptor B NM_018725

242098_at 1.91 up 2.11 up

KIAA1244 ///

LOC202451 KIAA1244 /// hypothetical protein LOC202451 NM_020340 /// XM_928403 /// XM_941101

221551_x_at 1.46 up 2.11 up ST6GALNAC4

ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-

acetylgalactosaminide alpha-2,6-sialyltransferase 4 NM_175039 /// NM_175040

202558_s_at 2.42 up 2.11 up STCH stress 70 protein chaperone, microsome-associated, 60kDa NM_006948

218913_s_at 1.32 up 2.11 up GMIP GEM interacting protein NM_016573

217924_at 1.98 up 2.11 up C6orf106 chromosome 6 open reading frame 106 NM_022758 /// NM_024294

224908_s_at 1.77 up 2.11 up TTL tubulin tyrosine ligase NM_153712

43511_s_at 2.88 up 2.11 up MRNA; cDNA DKFZp762M127 (from clone DKFZp762M127)

212059_s_at 1.08 up 2.12 up TRPC4AP

transient receptor potential cation channel, subfamily C, member 4 associated

protein NM_015638 /// NM_199368

209152_s_at 1.94 up 2.12 up TCF3 transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) NM_003200

228123_s_at 1.70 up 2.12 up ABHD12 abhydrolase domain containing 12 NM_001042472 /// NM_015600

1562386_s_at 1.72 up 2.12 up ZNF501 zinc finger protein 501 NM_145044

215071_s_at 1.86 up 2.12 up HIST1H2AC histone cluster 1, H2ac NM_003512

219410_at 1.31 up 2.12 up TMEM45A transmembrane protein 45A NM_018004

225876_at 2.34 up 2.12 up NPAL3 NIPA-like domain containing 3 NM_020448

211300_s_at 2.08 up 2.12 up TP53 tumor protein p53

NM_000546 /// NM_001126112 /// NM_001126113 ///

NM_001126114 /// NM_001126115 /// NM_001126116 ///

NM_001126117

216834_at 3.21 up 2.12 up RGS1 regulator of G-protein signaling 1 NM_002922

207219_at 1.83 up 2.13 up ZNF643 zinc finger protein 643 NM_023070

201140_s_at 1.83 up 2.13 up RAB5C RAB5C, member RAS oncogene family NM_004583 /// NM_201434

1554360_at 2.69 up 2.13 up FCHSD2 FCH and double SH3 domains 2 NM_014824

218145_at 1.55 up 2.13 up TRIB3 tribbles homolog 3 (Drosophila) NM_021158

222483_at 1.78 up 2.13 up EFHD2 EF-hand domain family, member D2 NM_024329

216470_x_at 1.85 up 2.13 up

LOC100134294 ///

PRSS1 /// PRSS2 ///

PRSS3 /// TRY6

protease, serine, 1 (trypsin 1) /// protease, serine, 2 (trypsin 2) /// protease,

serine, 3 /// trypsinogen C /// hypothetical protein LOC100134294

NM_002769 /// NM_002770 /// NM_002771 /// NM_007343 ///

NR_001296 /// XM_001713781 /// XR_042156

202336_s_at 2.05 up 2.13 up PAM peptidylglycine alpha-amidating monooxygenase NM_000919 /// NM_138766 /// NM_138821 /// NM_138822

239825_at 2.14 up 2.14 up Transcribed locus

205034_at 3.03 up 2.14 up CCNE2 cyclin E2 NM_057749

226026_at 2.17 up 2.14 up DIRC2 disrupted in renal carcinoma 2 NM_032839

202733_at 2.00 up 2.14 up P4HA2

procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase),

alpha polypeptide II NM_001017973 /// NM_001017974 /// NM_004199

223044_at 2.73 up 2.14 up SLC40A1 solute carrier family 40 (iron-regulated transporter), member 1 NM_014585

220495_s_at 1.60 up 2.14 up TXNDC15 thioredoxin domain containing 15 NM_024715

202145_at 2.01 up 2.14 up LY6E lymphocyte antigen 6 complex, locus E NM_001127213 /// NM_002346

1555543_a_at 1.93 up 2.14 up CLCC1 chloride channel CLIC-like 1 NM_001048210 /// NM_015127

226370_at 2.58 up 2.14 up KLHL15 kelch-like 15 (Drosophila) NM_030624

216308_x_at 1.70 up 2.14 up GRHPR glyoxylate reductase/hydroxypyruvate reductase NM_012203

222804_x_at 1.90 up 2.15 up WDR32 WD repeat domain 32 NM_024345

228913_at 2.48 up 2.15 up CDNA FLJ30519 fis, clone BRAWH2000859

1554807_a_at 2.05 up 2.15 up SPIRE1 spire homolog 1 (Drosophila) NM_020148

224839_s_at 1.65 up 2.15 up GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2 NM_133443

212314_at 2.05 up 2.15 up KIAA0746 /// SERINC2 KIAA0746 protein /// serine incorporator 2 NM_015187 /// NM_178865

235191_at 2.36 up 2.15 up LOC148189 Hypothetical protein LOC148189

209831_x_at 1.85 up 2.15 up DNASE2 deoxyribonuclease II, lysosomal NM_001375

201487_at 2.06 up 2.16 up CTSC cathepsin C NM_001114173 /// NM_001814 /// NM_148170

228305_at 1.40 up 2.16 up ZNF565 zinc finger protein 565 NM_001042474 /// NM_152477

202005_at 1.54 up 2.16 up ST14 suppression of tumorigenicity 14 (colon carcinoma) NM_021978

227927_at 1.45 up 2.16 up Clone HLS_IMAGE_594438 mRNA sequence

202011_at 3.01 up 2.16 up TJP1 tight junction protein 1 (zona occludens 1) NM_003257 /// NM_175610

218008_at 1.65 up 2.16 up C7orf42 chromosome 7 open reading frame 42 NM_017994

207904_s_at 2.21 up 2.16 up LNPEP leucyl/cystinyl aminopeptidase NM_005575 /// NM_175920

Page 23: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

244758_at 2.73 up 2.17 up ZNF452 zinc finger protein 452 NM_052923

224553_s_at 1.64 up 2.17 up TNFRSF18 tumor necrosis factor receptor superfamily, member 18 NM_004195 /// NM_148901 /// NM_148902

217787_s_at 1.66 up 2.17 up GALNT2

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-

acetylgalactosaminyltransferase 2 (GalNAc-T2) NM_004481

233419_at 1.24 up 2.17 up CDNA FLJ11851 fis, clone HEMBA1006744

204683_at 2.07 up 2.17 up ICAM2 intercellular adhesion molecule 2

NM_000873 /// NM_001099786 /// NM_001099787 ///

NM_001099788 /// NM_001099789

205402_x_at 1.84 up 2.18 up PRSS2 protease, serine, 2 (trypsin 2) NM_002770

228592_at 2.81 up 2.18 up MS4A1 membrane-spanning 4-domains, subfamily A, member 1 NM_021950 /// NM_152866

225576_at 2.38 up 2.18 up C6orf72 chromosome 6 open reading frame 72 NM_138785

212311_at 1.92 up 2.18 up KIAA0746 /// SERINC2 KIAA0746 protein /// serine incorporator 2 NM_015187 /// NM_178865

205047_s_at 1.99 up 2.18 up ASNS asparagine synthetase NM_001673 /// NM_133436 /// NM_183356

213485_s_at 1.94 up 2.19 up ABCC10 ATP-binding cassette, sub-family C (CFTR/MRP), member 10 NM_033450

243483_at 2.60 up 2.19 up TRPM8 transient receptor potential cation channel, subfamily M, member 8 NM_024080

209262_s_at 1.43 up 2.19 up NR2F6 nuclear receptor subfamily 2, group F, member 6 NM_005234

214255_at 2.61 up 2.19 up ATP10A ATPase, class V, type 10A NM_024490

227345_at 2.62 up 2.19 up TNFRSF10D

tumor necrosis factor receptor superfamily, member 10d, decoy with truncated

death domain NM_003840

214705_at 1.31 up 2.19 up INADL InaD-like (Drosophila) NM_176877

208711_s_at 2.45 up 2.19 up CCND1 cyclin D1 NM_053056

224615_x_at 2.11 up 2.19 up HM13 histocompatibility (minor) 13 NM_030789 /// NM_178580 /// NM_178581 /// NM_178582

224756_s_at 1.62 up 2.19 up BAT5 HLA-B associated transcript 5 NM_021160

215931_s_at 1.50 up 2.19 up ARFGEF2

ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-

inhibited) NM_006420

205741_s_at 2.68 up 2.20 up DTNA dystrobrevin, alpha

NM_001390 /// NM_001391 /// NM_001392 /// NM_032975 ///

NM_032978 /// NM_032979 /// NM_032980 /// NM_032981

201677_at 1.76 up 2.20 up C3orf37 Chromosome 3 open reading frame 37 NM_001006109 /// NM_020187

202688_at 2.56 up 2.20 up TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 NM_003810

213947_s_at 1.60 up 2.20 up NUP210 nucleoporin 210kDa NM_024923

226520_at 3.08 up 2.20 up Primary neuroblastoma cDNA, clone:Nbla11485

204972_at 2.77 up 2.20 up OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa NM_001032731 /// NM_002535 /// NM_016817

209925_at 1.93 up 2.21 up OCLN occludin NM_002538

214755_at 1.69 up 2.21 up UAP1L1 UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 NM_207309

219295_s_at 1.77 up 2.21 up PCOLCE2 procollagen C-endopeptidase enhancer 2 NM_013363

222128_at 1.92 up 2.21 up NSUN6 NOL1/NOP2/Sun domain family, member 6 NM_182543

209822_s_at 2.55 up 2.21 up VLDLR very low density lipoprotein receptor NM_001018056 /// NM_003383

41660_at 2.09 up 2.22 up CELSR1

cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog,

Drosophila) NM_014246

208686_s_at 1.52 up 2.22 up BRD2 bromodomain containing 2 NM_001113182 /// NM_005104

204415_at 2.69 up 2.22 up IFI6 interferon, alpha-inducible protein 6 NM_002038 /// NM_022872 /// NM_022873

230748_at 2.78 up 2.22 up SLC16A6 solute carrier family 16, member 6 (monocarboxylic acid transporter 7) NM_004694

201940_at 2.47 up 2.22 up CPD carboxypeptidase D NM_001304

218608_at 1.99 up 2.23 up ATP13A2 ATPase type 13A2 NM_022089

202307_s_at 2.61 up 2.23 up TAP1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) NM_000593

219470_x_at 2.10 up 2.23 up CCNJ cyclin J NM_019084

200985_s_at 1.95 up 2.23 up CD59 CD59 molecule, complement regulatory protein

NM_000611 /// NM_001127223 /// NM_001127225 ///

NM_001127226 /// NM_001127227 /// NM_203329 ///

NM_203330 /// NM_203331

207574_s_at 2.02 up 2.23 up GADD45B growth arrest and DNA-damage-inducible, beta NM_015675

AFFX-HUMISGF3A/M97935_3_at 3.11 up 2.23 up STAT1 signal transducer and activator of transcription 1, 91kDa NM_007315 /// NM_139266

203452_at 2.08 up 2.23 up B3GAT3 beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) NM_012200

224425_x_at 1.53 up 2.24 up LOC440888 ARP3 actin-related protein 3 homolog B pseudogene

202896_s_at 3.23 up 2.24 up SIRPA signal-regulatory protein alpha NM_001040022 /// NM_001040023 /// NM_080792

231887_s_at 1.89 up 2.24 up KIAA1274 KIAA1274 NM_014431

201710_at 1.96 up 2.24 up MYBL2 v-myb myeloblastosis viral oncogene homolog (avian)-like 2 NM_002466

219691_at 2.30 up 2.24 up SAMD9 sterile alpha motif domain containing 9 NM_017654

219077_s_at 2.24 up 2.25 up WWOX WW domain containing oxidoreductase NM_016373 /// NM_130791 /// NM_130844

207857_at 1.83 up 2.25 up LILRA2

leukocyte immunoglobulin-like receptor, subfamily A (with TM domain),

member 2 NM_006866

220058_at 2.62 up 2.25 up C17orf39 chromosome 17 open reading frame 39 NM_024052

228124_at 2.01 up 2.25 up ABHD12 abhydrolase domain containing 12 NM_001042472 /// NM_015600

217673_x_at 1.36 up 2.25 up GNAS GNAS complex locus

NM_000516 /// NM_001077488 /// NM_001077489 ///

NM_001077490 /// NM_016592 /// NM_080425 ///

NM_080426 /// NR_003259

206855_s_at 2.13 up 2.25 up HYAL2 hyaluronoglucosaminidase 2 NM_003773 /// NM_033158

203882_at 1.73 up 2.25 up IRF9 interferon regulatory factor 9 NM_006084

204745_x_at 1.98 up 2.25 up MT1G metallothionein 1G NM_005950

227054_at 2.22 up 2.25 up N6AMT2 N-6 adenine-specific DNA methyltransferase 2 (putative) NM_174928

207714_s_at 3.01 up 2.26 up SERPINH1

serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen

binding protein 1) NM_001235

204394_at 1.86 up 2.26 up SLC43A1 solute carrier family 43, member 1 NM_003627

1555561_a_at 1.78 up 2.26 up UGCGL2 UDP-glucose ceramide glucosyltransferase-like 2 NM_020121

238001_at 1.63 up 2.26 up KCTD6 potassium channel tetramerisation domain containing 6 NM_153331

231175_at 2.90 up 2.26 up C6orf65 chromosome 6 open reading frame 65 NM_152731

221869_at 1.56 up 2.27 up ZNF512B zinc finger protein 512B NM_020713

210514_x_at 2.26 up 2.27 up HLA-G major histocompatibility complex, class I, G NM_002127

37965_at 2.04 up 2.27 up PARVB parvin, beta NM_001003828 /// NM_013327

223120_at 1.67 up 2.27 up FUCA2 fucosidase, alpha-L- 2, plasma NM_032020

Page 24: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

210846_x_at 2.87 up 2.28 up TRIM14 tripartite motif-containing 14 NM_014788 /// NM_033219 /// NM_033220 /// NM_033221

201649_at 2.82 up 2.28 up UBE2L6 ubiquitin-conjugating enzyme E2L 6 NM_004223 /// NM_198183

205626_s_at 1.71 up 2.29 up CALB1 calbindin 1, 28kDa NM_004929

202864_s_at 2.50 up 2.29 up SP100 SP100 nuclear antigen NM_001080391 /// NM_003113

202744_at 2.11 up 2.29 up SLC20A2 solute carrier family 20 (phosphate transporter), member 2 NM_006749

222861_x_at 1.38 up 2.30 up FBXO44 F-box protein 44

NM_001014765 /// NM_033182 /// NM_183412 ///

NM_183413

221614_s_at 1.74 up 2.30 up RPH3AL rabphilin 3A-like (without C2 domains) NM_006987

205712_at 1.60 up 2.30 up PTPRD protein tyrosine phosphatase, receptor type, D

NM_001040712 /// NM_002839 /// NM_130391 ///

NM_130392 /// NM_130393

227434_at 2.07 up 2.31 up WBSCR17 Williams-Beuren syndrome chromosome region 17 NM_022479

236749_at 2.18 up 2.32 up MNT MAX binding protein NM_020310

219684_at 1.41 up 2.32 up RTP4 receptor (chemosensory) transporter protein 4 NM_022147

214077_x_at 2.62 up 2.32 up MEIS3P1 Meis homeobox 3 pseudogene 1 NR_002211

214028_x_at 3.48 up 2.32 up TDRD3 tudor domain containing 3 NM_030794

232549_at 1.35 up 2.32 up RBM11 RNA binding motif protein 11 NM_144770

220178_at 2.19 up 2.32 up C19orf28 chromosome 19 open reading frame 28 NM_001042680 /// NM_021731 /// NM_174983

203439_s_at 2.06 up 2.32 up STC2 stanniocalcin 2 NM_003714

226234_at 1.97 up 2.33 up CDNA FLJ33772 fis, clone BRSSN2000175

211799_x_at 2.17 up 2.33 up HLA-C major histocompatibility complex, class I, C

NM_002117 /// XM_001715881 /// XM_001717045 ///

XM_001719879

224987_at 2.32 up 2.33 up C6orf89 chromosome 6 open reading frame 89 NM_152734

217695_x_at 3.18 up 2.33 up

225732_at 3.46 up 2.33 up KLHDC5 kelch domain containing 5 NM_020782

209906_at 2.13 up 2.33 up C3AR1 complement component 3a receptor 1 NM_004054

230254_at 1.23 up 2.34 up Transcribed locus

1564651_at 1.61 up 2.34 up LOC221710 hypothetical protein LOC221710 XM_001720414 /// XM_001724989 /// XM_001725361

213294_at 2.93 up 2.34 up EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 NM_002759

215834_x_at 1.79 up 2.34 up SCARB1 scavenger receptor class B, member 1 NM_001082959 /// NM_005505

212860_at 2.21 up 2.34 up ZDHHC18 zinc finger, DHHC-type containing 18 NM_032283

200887_s_at 3.17 up 2.34 up STAT1 signal transducer and activator of transcription 1, 91kDa NM_007315 /// NM_139266

206085_s_at 1.74 up 2.34 up CTH cystathionase (cystathionine gamma-lyase) NM_001902 /// NM_153742

1567519_at 2.69 up 2.35 up PLXNA3 plexin A3 NM_017514

224663_s_at 2.58 up 2.35 up CFL2 cofilin 2 (muscle) NM_021914 /// NM_138638

223454_at 2.31 up 2.35 up CXCL16 chemokine (C-X-C motif) ligand 16 NM_001100812 /// NM_022059

218793_s_at 2.79 up 2.35 up SCML1 sex comb on midleg-like 1 (Drosophila)

NM_001037535 /// NM_001037536 /// NM_001037540 ///

NM_006746

202492_at 2.50 up 2.35 up ATG9A ATG9 autophagy related 9 homolog A (S. cerevisiae) NM_001077198 /// NM_024085

213988_s_at 2.30 up 2.35 up SAT1 spermidine/spermine N1-acetyltransferase 1 NM_002970

225681_at 1.62 up 2.35 up CTHRC1 collagen triple helix repeat containing 1 NM_138455

1552370_at 1.61 up 2.35 up C4orf33 chromosome 4 open reading frame 33 NM_001099783 /// NM_173487

223991_s_at 2.26 up 2.35 up

GALNT2 ///

LOC100132910

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-

acetylgalactosaminyltransferase 2 (GalNAc-T2) /// PRO1477

NM_004481 /// XM_001720527 /// XM_001722059 ///

XM_001723529

222125_s_at 1.90 up 2.35 up PH-4 hypoxia-inducible factor prolyl 4-hydroxylase NM_177938 /// NM_177939

235306_at 3.01 up 2.37 up GIMAP8 GTPase, IMAP family member 8 NM_175571

215395_x_at 1.89 up 2.37 up LOC100134294 /// TRY6 trypsinogen C /// hypothetical protein LOC100134294 NR_001296 /// XM_001713781 /// XR_042156

235144_at 2.86 up 2.37 up CDNA FLJ32320 fis, clone PROST2003537

224807_at 2.22 up 2.37 up GRAMD1A GRAM domain containing 1A NM_020895

201079_at 2.36 up 2.37 up SYNGR2 synaptogyrin 2 NM_004710

226187_at 1.93 up 2.37 up CDNA: FLJ23044 fis, clone LNG02454

220195_at 2.89 up 2.38 up MBD5 methyl-CpG binding domain protein 5 NM_018328

209589_s_at 2.50 up 2.38 up EPHB2 EPH receptor B2 NM_004442 /// NM_017449

210785_s_at 1.73 up 2.38 up C1orf38 chromosome 1 open reading frame 38 NM_001039477 /// NM_001105556 /// NM_004848

201313_at 3.13 up 2.38 up ENO2 enolase 2 (gamma, neuronal) NM_001975

204695_at 2.32 up 2.38 up CDC25A cell division cycle 25 homolog A (S. pombe) NM_001789 /// NM_201567

202510_s_at 2.11 up 2.39 up TNFAIP2 tumor necrosis factor, alpha-induced protein 2 NM_006291

218280_x_at 3.22 up 2.39 up

HIST2H2AA3 ///

HIST2H2AA4 histone cluster 2, H2aa3 /// histone cluster 2, H2aa4 NM_001040874 /// NM_003516

216905_s_at 1.77 up 2.39 up ST14 suppression of tumorigenicity 14 (colon carcinoma) NM_021978

204328_at 1.58 up 2.39 up TMC6 transmembrane channel-like 6 NM_001127198 /// NM_007267

221449_s_at 1.96 up 2.39 up ITFG1 integrin alpha FG-GAP repeat containing 1 NM_030790

1552256_a_at 1.91 up 2.40 up SCARB1 scavenger receptor class B, member 1 NM_001082959 /// NM_005505

209591_s_at 2.03 up 2.40 up BMP7 bone morphogenetic protein 7 (osteogenic protein 1) NM_001719

209344_at 1.70 up 2.40 up TPM4 tropomyosin 4 NM_003290

214975_s_at 2.05 up 2.40 up MTMR1 myotubularin related protein 1 NM_003828

224679_at 2.06 up 2.40 up MESDC2 mesoderm development candidate 2 NM_015154

212090_at 1.91 up 2.40 up GRINA

glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1

(glutamate binding) NM_000837 /// NM_001009184

204513_s_at 1.95 up 2.40 up ELMO1 engulfment and cell motility 1 NM_001039459 /// NM_014800 /// NM_130442

Page 25: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

232035_at 2.53 up 2.41 up

HIST1H4A /// HIST1H4B

/// HIST1H4C ///

HIST1H4D /// HIST1H4E

/// HIST1H4F ///

HIST1H4H /// HIST1H4I

/// HIST1H4J ///

HIST1H4K /// HIST1H4L

/// HIST2H4A ///

HIST2H4B /// HIST4H4

histone cluster 1, H4i /// histone cluster 1, H4a /// histone cluster 1, H4d ///

histone cluster 1, H4f /// histone cluster 1, H4k /// histone cluster 1, H4j ///

histone cluster 1, H4c /// histone cluster 1, H4h /// histone cluster 1, H4b ///

histone cluster 1, H4e /// histone cluster 1, H4l /// histone cluster 2, H4a ///

histone cluster 4, H4 /// histone cluster 2, H4b

NM_001034077 /// NM_003495 /// NM_003538 ///

NM_003539 /// NM_003540 /// NM_003541 /// NM_003542 ///

NM_003543 /// NM_003544 /// NM_003545 /// NM_003546 ///

NM_003548 /// NM_021968 /// NM_175054

207239_s_at 2.17 up 2.41 up PCTK1 PCTAIRE protein kinase 1 NM_006201 /// NM_033018

203045_at 2.38 up 2.42 up NINJ1 ninjurin 1 NM_004148

231885_at 2.28 up 2.42 up KIAA1702 /// ZNF451 zinc finger protein 451 /// KIAA1702 protein

NM_001031623 /// NM_015555 /// XM_001722675 ///

XM_001724453 /// XM_001726133

50314_i_at 1.80 up 2.42 up C20orf27 chromosome 20 open reading frame 27 NM_001039140

1566231_at 3.43 up 2.42 up MRNA; cDNA DKFZp667I0318 (from clone DKFZp667I0318)

231202_at 2.37 up 2.42 up ALDH1L2 Aldehyde dehydrogenase 1 family, member L2 NM_001034173

201876_at 2.60 up 2.43 up PON2 paraoxonase 2 NM_000305 /// NM_001018161

222224_at 2.51 up 2.43 up NACA2 nascent polypeptide-associated complex alpha subunit 2 NM_199290

222774_s_at 2.52 up 2.43 up NETO2 neuropilin (NRP) and tolloid (TLL)-like 2 NM_018092

207463_x_at 2.24 up 2.44 up PRSS3 protease, serine, 3 NM_002771 /// NM_007343

218436_at 2.24 up 2.44 up SIL1 SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae) NM_001037633 /// NM_022464

235749_at 2.58 up 2.45 up UGCGL2 UDP-glucose ceramide glucosyltransferase-like 2 NM_020121

211769_x_at 2.07 up 2.45 up SERINC3 serine incorporator 3 NM_006811 /// NM_198941

204769_s_at 1.68 up 2.45 up TAP2 transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) NM_000544 /// NM_018833

221759_at 1.66 up 2.45 up G6PC3 glucose 6 phosphatase, catalytic, 3 NM_138387

222747_s_at 2.06 up 2.45 up SCML1 sex comb on midleg-like 1 (Drosophila)

NM_001037535 /// NM_001037536 /// NM_001037540 ///

NM_006746

219209_at 3.42 up 2.46 up IFIH1 interferon induced with helicase C domain 1 NM_022168

211858_x_at 2.35 up 2.46 up GNAS GNAS complex locus

NM_000516 /// NM_001077488 /// NM_001077489 ///

NM_001077490 /// NM_016592 /// NM_080425 ///

NM_080426 /// NR_003259

219479_at 2.18 up 2.46 up KDELC1 KDEL (Lys-Asp-Glu-Leu) containing 1 NM_024089

218012_at 1.48 up 2.46 up TSPYL2 TSPY-like 2 NM_022117

234968_at 1.99 up 2.46 up DENND4C DENN/MADD domain containing 4C NM_017925

207076_s_at 2.38 up 2.47 up ASS1 argininosuccinate synthetase 1 NM_000050 /// NM_054012

242019_at 2.43 up 2.47 up LASS6 LAG1 homolog, ceramide synthase 6 NM_203463

222881_at 3.36 up 2.47 up HPSE heparanase NM_001098540 /// NM_006665

221845_s_at 2.73 up 2.47 up CLPB ClpB caseinolytic peptidase B homolog (E. coli) NM_030813

31837_at 2.05 up 2.48 up LMF2 lipase maturation factor 2 NM_033200

229091_s_at 2.73 up 2.48 up CCNJ cyclin J NM_019084

224749_at 1.96 up 2.48 up ITFG3 integrin alpha FG-GAP repeat containing 3 NM_032039

202687_s_at 3.02 up 2.48 up TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 NM_003810

205959_at 3.98 up 2.49 up MMP13 matrix metallopeptidase 13 (collagenase 3) NM_002427

214452_at 2.88 up 2.49 up BCAT1 branched chain aminotransferase 1, cytosolic NM_005504

216269_s_at 1.53 up 2.49 up ELN elastin (supravalvular aortic stenosis, Williams-Beuren syndrome)

NM_000501 /// NM_001081752 /// NM_001081753 ///

NM_001081754 /// NM_001081755

218837_s_at 1.90 up 2.49 up UBE2D4 ubiquitin-conjugating enzyme E2D 4 (putative) NM_015983

233911_s_at 1.70 up 2.50 up PPM1H protein phosphatase 1H (PP2C domain containing) NM_020700

211528_x_at 2.47 up 2.50 up HLA-G major histocompatibility complex, class I, G NM_002127

219863_at 3.16 up 2.51 up HERC5 hect domain and RLD 5 NM_016323

201063_at 2.45 up 2.51 up RCN1 reticulocalbin 1, EF-hand calcium binding domain NM_002901

209305_s_at 1.95 up 2.51 up GADD45B growth arrest and DNA-damage-inducible, beta NM_015675

204483_at 2.22 up 2.52 up ENO3 enolase 3 (beta, muscle) NM_001976 /// NM_053013

241654_at 3.18 up 2.52 up Transcribed locus

209160_at 1.37 up 2.53 up AKR1C3

aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid

dehydrogenase, type II) NM_003739

242447_at 2.09 up 2.53 up LOC285382 hypothetical gene supported by AK091454 NM_001025266

219763_at 2.46 up 2.53 up DENND1A DENN/MADD domain containing 1A NM_020946 /// NM_024820

207620_s_at 2.60 up 2.53 up CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) NM_001126054 /// NM_001126055 /// NM_003688

201559_s_at 2.96 up 2.53 up CLIC4 chloride intracellular channel 4 NM_013943

227182_at 1.26 up 2.54 up SUSD3 sushi domain containing 3 NM_145006

202638_s_at 2.53 up 2.54 up ICAM1 intercellular adhesion molecule 1 (CD54), human rhinovirus receptor NM_000201

202439_s_at 1.77 up 2.54 up IDS iduronate 2-sulfatase (Hunter syndrome) NM_000202 /// NM_006123

217967_s_at 2.95 up 2.55 up FAM129A family with sequence similarity 129, member A NM_052966

205352_at 2.64 up 2.55 up SERPINI1 serpin peptidase inhibitor, clade I (neuroserpin), member 1 NM_001122752 /// NM_005025

1554464_a_at 2.08 up 2.56 up CRTAP cartilage associated protein NM_006371

216091_s_at 2.87 up 2.57 up BTRC beta-transducin repeat containing NM_003939 /// NM_033637

212194_s_at 2.39 up 2.57 up TM9SF4 transmembrane 9 superfamily protein member 4 NM_014742

215388_s_at 3.53 up 2.57 up CFH /// CFHR1 complement factor H /// complement factor H-related 1 NM_000186 /// NM_001014975 /// NM_002113

202012_s_at 2.63 up 2.58 up EXT2 exostoses (multiple) 2 NM_000401 /// NM_207122

218888_s_at 2.75 up 2.58 up NETO2 neuropilin (NRP) and tolloid (TLL)-like 2 NM_018092

202863_at 3.08 up 2.59 up SP100 SP100 nuclear antigen NM_001080391 /// NM_003113

203595_s_at 4.54 up 2.60 up IFIT5 interferon-induced protein with tetratricopeptide repeats 5 NM_012420

232092_at 1.59 up 2.60 up MCART1 mitochondrial carrier triple repeat 1 NM_033412

200839_s_at 2.41 up 2.61 up CTSB cathepsin B

NM_001908 /// NM_147780 /// NM_147781 /// NM_147782 ///

NM_147783

Page 26: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

222361_at 2.31 up 2.61 up LOC643224 similar to tubulin, beta 8 XR_041477 /// XR_041478

209417_s_at 2.90 up 2.61 up IFI35 interferon-induced protein 35 NM_005533

209398_at 2.87 up 2.62 up HIST1H1C histone cluster 1, H1c NM_005319

218303_x_at 4.03 up 2.62 up KRCC1 lysine-rich coiled-coil 1 NM_016618

210692_s_at 2.35 up 2.62 up SLC43A3 solute carrier family 43, member 3 NM_014096 /// NM_017611 /// NM_199329

35626_at 2.58 up 2.63 up SGSH N-sulfoglucosamine sulfohydrolase (sulfamidase) NM_000199

201393_s_at 2.38 up 2.63 up IGF2R insulin-like growth factor 2 receptor NM_000876

242861_at 1.87 up 2.63 up

1559591_s_at 1.99 up 2.64 up CHDH choline dehydrogenase NM_018397

214992_s_at 1.90 up 2.65 up DNASE2 deoxyribonuclease II, lysosomal NM_001375

202304_at 2.98 up 2.65 up FNDC3A fibronectin type III domain containing 3A NM_001079673 /// NM_014923

218161_s_at 2.38 up 2.66 up CLN6 ceroid-lipofuscinosis, neuronal 6, late infantile, variant NM_017882

201188_s_at 2.05 up 2.66 up ITPR3 inositol 1,4,5-triphosphate receptor, type 3 NM_002224

213836_s_at 1.96 up 2.66 up WIPI1 WD repeat domain, phosphoinositide interacting 1 NM_017983

221882_s_at 1.61 up 2.67 up TMEM8 transmembrane protein 8 (five membrane-spanning domains) NM_021259

223501_at 3.26 up 2.67 up TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b NM_006573

216202_s_at 2.12 up 2.67 up SPTLC2 serine palmitoyltransferase, long chain base subunit 2 NM_004863

201819_at 2.12 up 2.68 up SCARB1 scavenger receptor class B, member 1 NM_001082959 /// NM_005505

225239_at 1.63 up 2.69 up CDNA FLJ26120 fis, clone SYN00419

205896_at 2.58 up 2.69 up SLC22A4 solute carrier family 22 (organic cation/ergothioneine transporter), member 4 NM_003059

204458_at 2.08 up 2.69 up LYPLA3 lysophospholipase 3 (lysosomal phospholipase A2) NM_012320

235419_at 1.34 up 2.70 up Transcribed locus

203827_at 1.79 up 2.71 up WIPI1 WD repeat domain, phosphoinositide interacting 1 NM_017983

223903_at 1.86 up 2.71 up TLR9 /// TWF2 twinfilin, actin-binding protein, homolog 2 (Drosophila) /// toll-like receptor 9 NM_007284 /// NM_017442

1567080_s_at 2.33 up 2.72 up CLN6 ceroid-lipofuscinosis, neuronal 6, late infantile, variant NM_017882

AFFX-HUMISGF3A/M97935_MB_at 3.31 up 2.73 up STAT1 signal transducer and activator of transcription 1, 91kDa NM_007315 /// NM_139266

221658_s_at 2.41 up 2.73 up IL21R interleukin 21 receptor NM_021798 /// NM_181078 /// NM_181079

216247_at 3.20 up 2.74 up RPS20 ribosomal protein S20 NM_001023

218368_s_at 2.02 up 2.75 up TNFRSF12A tumor necrosis factor receptor superfamily, member 12A NM_016639

243042_at 2.49 up 2.75 up FAM73A family with sequence similarity 73, member A NM_198549

209732_at 2.18 up 2.75 up CLEC2B C-type lectin domain family 2, member B NM_005127

200615_s_at 2.39 up 2.76 up AP2B1 adaptor-related protein complex 2, beta 1 subunit NM_001030006 /// NM_001282

217678_at 2.51 up 2.77 up SLC7A11 solute carrier family 7, (cationic amino acid transporter, y+ system) member 11 NM_014331

208926_at 2.29 up 2.78 up NEU1 sialidase 1 (lysosomal sialidase) NM_000434

217080_s_at 2.13 up 2.79 up HOMER2 homer homolog 2 (Drosophila) NM_004839 /// NM_199330 /// NM_199331 /// NM_199332

225177_at 1.83 up 2.79 up RAB11FIP1 RAB11 family interacting protein 1 (class I) NM_001002233 /// NM_001002814 /// NM_025151

227040_at 2.56 up 2.79 up NHLRC3 NHL repeat containing 3 NM_001012754 /// NM_001017370

217436_x_at 2.77 up 2.79 up HLA-J major histocompatibility complex, class I, J (pseudogene)

227804_at 2.19 up 2.80 up TLCD1 TLC domain containing 1 NM_138463

241919_x_at 2.56 up 2.81 up WDR31 WD repeat domain 31 NM_001006615 /// NM_001012361 /// NM_145241

1555759_a_at 3.80 up 2.81 up CCL5 chemokine (C-C motif) ligand 5 NM_002985

200838_at 2.47 up 2.81 up CTSB cathepsin B

NM_001908 /// NM_147780 /// NM_147781 /// NM_147782 ///

NM_147783

212958_x_at 3.13 up 2.81 up PAM peptidylglycine alpha-amidating monooxygenase NM_000919 /// NM_138766 /// NM_138821 /// NM_138822

207809_s_at 2.02 up 2.82 up ATP6AP1 ATPase, H+ transporting, lysosomal accessory protein 1 NM_001183

208499_s_at 2.56 up 2.82 up DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 NM_006260

227134_at 2.14 up 2.82 up SYTL1 synaptotagmin-like 1 NM_032872

210314_x_at 2.07 up 2.83 up TNFSF13 tumor necrosis factor (ligand) superfamily, member 13 NM_003808 /// NM_172087 /// NM_172088

243116_at 2.55 up 2.84 up PIP5KL1 phosphatidylinositol-4-phosphate 5-kinase-like 1 NM_173492

201601_x_at 4.35 up 2.84 up IFITM1 interferon induced transmembrane protein 1 (9-27) NM_003641

203833_s_at 2.47 up 2.84 up TGOLN2 trans-golgi network protein 2 NM_006464

219426_at 2.22 up 2.86 up EIF2C3 eukaryotic translation initiation factor 2C, 3 NM_024852 /// NM_177422

225335_at 2.79 up 2.86 up ZNF496 zinc finger protein 496 NM_032752

212285_s_at 2.33 up 2.88 up AGRN agrin NM_198576

204443_at 1.98 up 2.89 up ARSA arylsulfatase A

NM_000487 /// NM_001085425 /// NM_001085426 ///

NM_001085427 /// NM_001085428

210540_s_at 2.79 up 2.90 up B4GALT4 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 NM_003778 /// NM_212543

204955_at 2.40 up 2.90 up SRPX sushi-repeat-containing protein, X-linked NM_006307

220773_s_at 2.18 up 2.90 up GPHN gephyrin NM_001024218 /// NM_020806

222067_x_at 1.97 up 2.93 up HIST1H2BD histone cluster 1, H2bd NM_021063 /// NM_138720

203780_at 5.29 up 2.94 up MPZL2 myelin protein zero-like 2 NM_005797 /// NM_144765

209969_s_at 2.85 up 2.96 up STAT1 signal transducer and activator of transcription 1, 91kDa NM_007315 /// NM_139266

207414_s_at 2.62 up 2.96 up PCSK6 proprotein convertase subtilisin/kexin type 6

NM_002570 /// NM_138319 /// NM_138320 /// NM_138321 ///

NM_138322 /// NM_138323 /// NM_138324 /// NM_138325

202869_at 2.88 up 2.97 up OAS1 2',5'-oligoadenylate synthetase 1, 40/46kDa NM_001032409 /// NM_002534 /// NM_016816

226603_at 4.18 up 2.98 up SAMD9L sterile alpha motif domain containing 9-like NM_152703

218999_at 1.78 up 2.98 up TMEM140 transmembrane protein 140 NM_018295

243946_at 2.07 up 2.99 up SMOC2 SPARC related modular calcium binding 2 NM_022138

202637_s_at 3.08 up 3.00 up ICAM1 intercellular adhesion molecule 1 (CD54), human rhinovirus receptor NM_000201

214455_at 3.83 up 3.02 up

HIST1H2BC ///

HIST1H2BE ///

HIST1H2BF ///

HIST1H2BG ///

HIST1H2BI

histone cluster 1, H2bg /// histone cluster 1, H2bf /// histone cluster 1, H2be ///

histone cluster 1, H2bi /// histone cluster 1, H2bc

NM_003518 /// NM_003522 /// NM_003523 /// NM_003525 ///

NM_003526

242573_at 4.99 up 3.03 up Transcribed locus

207408_at 2.12 up 3.04 up SLC22A14 solute carrier family 22, member 14 NM_004803

Page 27: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

233496_s_at 2.71 up 3.05 up CFL2 cofilin 2 (muscle) NM_021914 /// NM_138638

204684_at 2.61 up 3.05 up NPTX1 neuronal pentraxin I NM_002522

211019_s_at 1.86 up 3.05 up LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) NM_001001438 /// NM_002340

205483_s_at 4.87 up 3.07 up ISG15 ISG15 ubiquitin-like modifier NM_005101

1562935_at 2.40 up 3.11 up CDNA clone IMAGE:5285945

219971_at 2.30 up 3.14 up IL21R interleukin 21 receptor NM_021798 /// NM_181078 /// NM_181079

227609_at 3.29 up 3.16 up EPSTI1 epithelial stromal interaction 1 (breast) NM_001002264 /// NM_033255

204533_at 16.87 up 3.16 up CXCL10 chemokine (C-X-C motif) ligand 10 NM_001565

207565_s_at 2.85 up 3.17 up MR1 major histocompatibility complex, class I-related NM_001531

217419_x_at 3.50 up 3.19 up AGRN agrin NM_198576

230036_at 2.77 up 3.28 up SAMD9L sterile alpha motif domain containing 9-like NM_152703

211708_s_at 3.99 up 3.28 up SCD stearoyl-CoA desaturase (delta-9-desaturase) NM_005063

AFFX-HUMISGF3A/M97935_MA_at 3.98 up 3.29 up STAT1 signal transducer and activator of transcription 1, 91kDa NM_007315 /// NM_139266

202411_at 5.16 up 3.31 up IFI27 interferon, alpha-inducible protein 27 NM_005532

232546_at 3.23 up 3.32 up TP73 tumor protein p73

NM_001126240 /// NM_001126241 /// NM_001126242 ///

NM_005427

204088_at 2.36 up 3.34 up P2RX4 purinergic receptor P2X, ligand-gated ion channel, 4 NM_002560

210830_s_at 3.06 up 3.47 up PON2 paraoxonase 2 NM_000305 /// NM_001018161

214620_x_at 3.09 up 3.50 up PAM peptidylglycine alpha-amidating monooxygenase NM_000919 /// NM_138766 /// NM_138821 /// NM_138822

205552_s_at 4.08 up 3.56 up OAS1 2',5'-oligoadenylate synthetase 1, 40/46kDa NM_001032409 /// NM_002534 /// NM_016816

224701_at 3.61 up 3.66 up PARP14 poly (ADP-ribose) polymerase family, member 14 NM_017554

201397_at 2.74 up 3.68 up PHGDH phosphoglycerate dehydrogenase NM_006623

206039_at 2.94 up 3.70 up RAB33A RAB33A, member RAS oncogene family NM_004794

208436_s_at 3.69 up 3.73 up IRF7 interferon regulatory factor 7 NM_001572 /// NM_004029 /// NM_004031

228617_at 4.30 up 3.76 up XAF1 XIAP associated factor 1 NM_017523 /// NM_199139

207156_at 3.49 up 3.81 up

HIST1H2AG ///

HIST1H2AI ///

HIST1H2AJ ///

HIST1H2AK ///

HIST1H2AL ///

HIST1H2AM

histone cluster 1, H2ai /// histone cluster 1, H2ak /// histone cluster 1, H2aj ///

histone cluster 1, H2al /// histone cluster 1, H2am /// histone cluster 1, H2ag

NM_003509 /// NM_003510 /// NM_003511 /// NM_003514 ///

NM_021064 /// NM_021066

208527_x_at 5.44 up 3.83 up

HIST1H2BC ///

HIST1H2BE ///

HIST1H2BF ///

HIST1H2BG ///

HIST1H2BI

histone cluster 1, H2bg /// histone cluster 1, H2bf /// histone cluster 1, H2be ///

histone cluster 1, H2bi /// histone cluster 1, H2bc

NM_003518 /// NM_003522 /// NM_003523 /// NM_003525 ///

NM_003526

205692_s_at 3.27 up 3.83 up CD38 CD38 molecule NM_001775

207738_s_at 4.69 up 3.87 up NCKAP1 NCK-associated protein 1 NM_013436 /// NM_205842

210797_s_at 4.05 up 3.87 up OASL 2'-5'-oligoadenylate synthetase-like NM_003733 /// NM_198213

213293_s_at 7.12 up 3.90 up TRIM22 tripartite motif-containing 22 NM_006074

214453_s_at 3.95 up 3.90 up IFI44 interferon-induced protein 44 NM_006417

203952_at 1.79 up 3.98 up ATF6 activating transcription factor 6 NM_007348

212233_at 4.53 up 4.00 up MAP1B microtubule-associated protein 1B NM_005909

229450_at 7.85 up 4.08 up IFIT3 interferon-induced protein with tetratricopeptide repeats 3 NM_001031683 /// NM_001549

210587_at 3.95 up 4.28 up INHBE inhibin, beta E NM_031479

214290_s_at 4.87 up 4.51 up

HIST2H2AA3 ///

HIST2H2AA4 histone cluster 2, H2aa3 /// histone cluster 2, H2aa4 NM_001040874 /// NM_003516

209806_at 5.72 up 4.55 up HIST1H2BK histone cluster 1, H2bk NM_080593

218986_s_at 6.21 up 4.55 up DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 NM_017631

205660_at 4.99 up 4.58 up OASL 2'-5'-oligoadenylate synthetase-like NM_003733 /// NM_198213

208546_x_at 5.83 up 4.60 up HIST1H2BH histone cluster 1, H2bh NM_003524

204994_at 6.32 up 4.84 up MX2 myxovirus (influenza virus) resistance 2 (mouse) NM_002463

33304_at 6.97 up 5.07 up ISG20 interferon stimulated exonuclease gene 20kDa NM_002201

205569_at 7.93 up 5.11 up LAMP3 lysosomal-associated membrane protein 3 NM_014398

218400_at 6.51 up 5.17 up OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa NM_006187

226725_at 5.31 up 5.28 up Transcribed locus

202932_at 6.87 up 5.35 up YES1 v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1 NM_005433

202086_at 6.61 up 5.43 up MX1

myxovirus (influenza virus) resistance 1, interferon-inducible protein p78

(mouse) NM_002462

202933_s_at 6.75 up 5.62 up YES1 v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1 NM_005433

203153_at 8.26 up 5.74 up IFIT1 interferon-induced protein with tetratricopeptide repeats 1 NM_001548

208490_x_at 7.26 up 5.82 up

HIST1H2BC ///

HIST1H2BE ///

HIST1H2BF ///

HIST1H2BG ///

HIST1H2BI

histone cluster 1, H2bg /// histone cluster 1, H2bf /// histone cluster 1, H2be ///

histone cluster 1, H2bi /// histone cluster 1, H2bc

NM_003518 /// NM_003522 /// NM_003523 /// NM_003525 ///

NM_003526

208579_x_at 8.23 up 5.83 up H2BFS H2B histone family, member S

226757_at 10.03 up 5.87 up IFIT2 interferon-induced protein with tetratricopeptide repeats 2 NM_001547

204698_at 8.59 up 5.90 up ISG20 interferon stimulated exonuclease gene 20kDa NM_002201

209911_x_at 6.78 up 5.97 up HIST1H2BD histone cluster 1, H2bd NM_021063 /// NM_138720

Page 28: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

208180_s_at 6.59 up 6.15 up

HIST1H4A /// HIST1H4B

/// HIST1H4C ///

HIST1H4D /// HIST1H4E

/// HIST1H4F ///

HIST1H4H /// HIST1H4I

/// HIST1H4J ///

HIST1H4K /// HIST1H4L

/// HIST2H4A ///

HIST2H4B /// HIST4H4

histone cluster 1, H4i /// histone cluster 1, H4a /// histone cluster 1, H4d ///

histone cluster 1, H4f /// histone cluster 1, H4k /// histone cluster 1, H4j ///

histone cluster 1, H4c /// histone cluster 1, H4h /// histone cluster 1, H4b ///

histone cluster 1, H4e /// histone cluster 1, H4l /// histone cluster 2, H4a ///

histone cluster 4, H4 /// histone cluster 2, H4b

NM_001034077 /// NM_003495 /// NM_003538 ///

NM_003539 /// NM_003540 /// NM_003541 /// NM_003542 ///

NM_003543 /// NM_003544 /// NM_003545 /// NM_003546 ///

NM_003548 /// NM_021968 /// NM_175054

227347_x_at 6.43 up 6.16 up HES4 hairy and enhancer of split 4 (Drosophila) NM_021170

204747_at 8.69 up 6.44 up IFIT3 interferon-induced protein with tetratricopeptide repeats 3 NM_001031683 /// NM_001549

204439_at 15.13 up 11.71 up IFI44L interferon-induced protein 44-like NM_006820

239312_at 377.60 up 261.42 up

217481_x_at 2.02 up MRNA; cDNA DKFZp586F1622 (from clone DKFZp586F1622)

230208_at 2.04 up Transcribed locus

222895_s_at 2.05 up BCL11B B-cell CLL/lymphoma 11B (zinc finger protein) NM_022898 /// NM_138576

238945_at 2.06 up

235486_at 2.11 up C11orf41 chromosome 11 open reading frame 41 NM_012194

209928_s_at 2.17 up MSC musculin (activated B-cell factor-1) NM_005098

235956_at 2.25 up KIAA1377 KIAA1377 NM_020802

1559682_at 2.27 up TRIM16L Tripartite motif-containing 16-like NM_001037330

1558652_at 2.27 up KIAA1310 KIAA1310 NM_001115016 /// NM_017991

211610_at 2.29 up KLF6 Kruppel-like factor 6 NM_001300

240801_at 2.34 up C21orf37 chromosome 21 open reading frame 37 NM_001005521

237302_at 2.35 up Transcribed locus

209676_at 2.36 up TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) NM_001032281 /// NM_006287

233441_at 2.37 up ONECUT2 one cut homeobox 2 NM_004852

1565557_at 2.38 up FLJ00399 protein

237240_at 2.40 up Transcribed locus

205337_at 2.46 up DCT

dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related

protein 2) NM_001922

214186_s_at 2.64 up 3.8-1 MHC class I mRNA fragment 3.8-1 NR_002812

1553261_x_at 2.67 up ALS2CR11 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11 NM_152525

238571_at 2.71 up Transcribed locus

216580_at 2.81 up

hCG_2015956 ///

LOC100127893 ///

LOC100130892 ///

LOC100131085 ///

LOC388401 ///

LOC441896 ///

LOC641900 ///

LOC646346 ///

LOC728380 ///

LOC728843 /// RPL7

ribosomal protein L7 /// similar to ribosomal protein L7 /// similar to 60S

ribosomal protein L7 /// hCG2015956 /// hypothetical LOC728380 ///

hypothetical LOC728843 /// hypothetical protein LOC100130892 /// hypothetical

LOC100131085

NM_000971 /// XM_001719048 /// XM_001720172 ///

XM_001722435 /// XM_001722574 /// XM_001725978 ///

XM_943842 /// XR_015391 /// XR_015500 /// XR_015600 ///

XR_015705 /// XR_016234 /// XR_016879 /// XR_017105 ///

XR_018042 /// XR_018794 /// XR_019544 /// XR_038286 ///

XR_038691 /// XR_038779 /// XR_038885 /// XR_038901 ///

XR_038947 /// XR_039043 /// XR_039090 /// XR_039345 ///

XR_039473 /// XR_039795

241738_at 2.91 up ZNF250 zinc finger protein 250 NM_001109689 /// NM_021061

240366_at 2.97 up LOC100129562 hypothetical protein LOC100129562 XM_001714915 /// XM_001716050 /// XM_001718238

215591_at 3.09 up SATB2 SATB homeobox 2 NM_015265

233730_at 3.22 up FAM135A family with sequence similarity 135, member A NM_001105531 /// NM_020819

240447_at 3.48 up

Transcribed locus, strongly similar to NP_036437.1 adaptor-related protein

complex 2, alpha 2 subunit [Homo sapiens]

206188_at 2.00 down ZNF623 zinc finger protein 623 NM_001082480 /// NM_014789

242366_at 2.01 down Homo sapiens, clone IMAGE:3858719, mRNA

230672_at 2.01 down CDNA clone IMAGE:4841343

1555848_at 2.02 down MRNA full length insert cDNA clone EUROIMAGE 1652049

1556060_a_at 2.07 down KIAA1702 KIAA1702 protein XM_001722675 /// XM_001724453 /// XM_001726133

212468_at 2.08 down SPAG9 sperm associated antigen 9 NM_003971

244165_at 2.09 down C10orf18 chromosome 10 open reading frame 18 NM_017782

242960_at 2.09 down Transcribed locus

236322_at 2.10 down Transcribed locus

241093_at 2.10 down Transcribed locus

1558277_at 2.10 down ZNF740 zinc finger protein 740 NM_001004304

232030_at 2.11 down KIAA1632 KIAA1632 NM_020964

243302_at 2.14 down Transcribed locus

205356_at 2.14 down USP13 ubiquitin specific peptidase 13 (isopeptidase T-3) NM_003940

229206_at 2.15 down CDNA FLJ13350 fis, clone OVARC1002143

1553348_a_at 2.16 down NFX1 nuclear transcription factor, X-box binding 1 NM_002504 /// NM_147133 /// NM_147134

232138_at 2.16 down MBNL2 Muscleblind-like 2 (Drosophila) NM_144778 /// NM_207304

230905_at 2.18 down ZDHHC4 Zinc finger, DHHC-type containing 4 NM_018106

200920_s_at 2.19 down BTG1 B-cell translocation gene 1, anti-proliferative NM_001731

222572_at 2.19 down PPM2C protein phosphatase 2C, magnesium-dependent, catalytic subunit NM_018444

229997_at 2.19 down VANGL1 vang-like 1 (van gogh, Drosophila) NM_138959

227270_at 2.20 down LOC285550 hypothetical protein LOC285550 XR_017764 /// XR_017908 /// XR_040763

1559096_x_at 2.23 down FBXO9 F-box protein 9 NM_012347 /// NM_033480 /// NM_033481

242437_at 2.23 down Transcribed locus

229388_at 2.24 down CDNA clone IMAGE:5295564

235973_at 2.25 down TRIP11 Thyroid hormone receptor interactor 11 NM_004239

Page 29: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

239090_at 2.26 down FLJ13305 hypothetical protein FLJ13305 NM_032180

1570176_at 2.27 down Transcribed locus

242376_at 2.29 down Transcribed locus

212636_at 2.30 down QKI quaking homolog, KH domain RNA binding (mouse) NM_006775 /// NM_206853 /// NM_206854 /// NM_206855

232537_x_at 2.31 down MARK3 MAP/microtubule affinity-regulating kinase 3 NM_002376

210803_at 2.35 down TXNRD2 thioredoxin reductase 2 NM_006440

240921_at 2.36 down

238704_at 2.36 down CDNA FLJ40697 fis, clone THYMU2025406

230304_at 2.36 down CDNA clone IMAGE:30332316

238311_at 2.37 down Transcribed locus

221878_at 2.38 down LOC388969 hypothetical LOC388969 NM_001013649

1559121_s_at 2.38 down ARIH2 Ariadne homolog 2 (Drosophila) NM_006321

217627_at 2.39 down ZNF573 zinc finger protein 573 NM_152360

227748_at 2.40 down CCBL2 cysteine conjugate-beta lyase 2 NM_001008661 /// NM_001008662 /// NM_019610

1556568_a_at 2.40 down Clone C4E 5.3 (CAC)n/(GTG)n repeat-containing mRNA

216112_at 2.44 down CDNA FLJ13538 fis, clone PLACE1006617

241845_at 2.45 down

1557217_a_at 2.45 down FANCB Fanconi anemia, complementation group B NM_001018113 /// NM_152633

236837_x_at 2.45 down LOC650794 Similar to FRAS1 related extracellular matrix protein 2 XM_001716126 /// XM_370711 /// XM_939879

1569713_at 2.49 down CDNA clone IMAGE:4049873

201460_at 2.51 down MAPKAPK2 mitogen-activated protein kinase-activated protein kinase 2 NM_004759 /// NM_032960

1553099_at 2.51 down TIGD1 tigger transposable element derived 1 NM_145702

212073_at 2.51 down CSNK2A1 /// CSNK2A1P

casein kinase 2, alpha 1 polypeptide /// casein kinase 2, alpha 1 polypeptide

pseudogene NM_001895 /// NM_177559 /// NM_177560 /// NR_002207

1555154_a_at 2.55 down QKI quaking homolog, KH domain RNA binding (mouse) NM_006775 /// NM_206853 /// NM_206854 /// NM_206855

244640_at 2.57 down LOC342892 hypothetical protein LOC342892 XM_001720220 /// XM_001720258 /// XM_001722534

213939_s_at 2.59 down RUFY3 RUN and FYVE domain containing 3 NM_001037442 /// NM_014961

1554213_at 2.64 down ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 NM_014629

1561208_at 2.67 down CDNA clone IMAGE:4819376

238691_at 2.76 down SNHG10 small nucleolar RNA host gene (non-protein coding) 10 NR_001459 /// NR_003138

242890_at 2.79 down CDNA FLJ34225 fis, clone FCBBF3023372

233005_at 2.80 down CDNA FLJ12602 fis, clone NT2RM4001437

231904_at 2.82 down U2AF1 U2 small nuclear RNA auxiliary factor 1 NM_001025203 /// NM_001025204 /// NM_006758

238070_at 2.82 down CHD1L Chromodomain helicase DNA binding protein 1-like NM_004284

237625_s_at 2.84 down

Immunoglobulin kappa light chain precursor, variable and constant regions

(IGK gene), isolate FRA

213139_at 2.88 down SNAI2 snail homolog 2 (Drosophila) NM_003068

230874_at 2.93 down CDNA FLJ36579 fis, clone TRACH2012647

207826_s_at 3.02 down ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein NM_002167

241385_at 3.14 down LARP7 La ribonucleoprotein domain family, member 7 NM_015454 /// NM_016648

219152_at 3.20 down PODXL2 podocalyxin-like 2 NM_015720

230535_s_at 3.27 down Transcribed locus

1558756_at 3.39 down C2CD3 C2 calcium-dependent domain containing 3 NM_015531

229371_at 3.45 down CDNA FLJ13903 fis, clone THYRO1001854

239252_at 3.55 down Transcribed locus

239823_at 3.58 down Transcribed locus

222791_at 3.62 down RSBN1 round spermatid basic protein 1 NM_018364

232130_at 3.66 down CDNA FLJ13050 fis, clone NT2RP3001432

1558802_at 3.84 down CDNA FLJ37319 fis, clone BRAMY2018027

1557155_a_at 4.39 down FLJ30375 Hypothetical gene supported by AK054937 XM_001724993 /// XM_001725199 /// XM_001725628

201635_s_at 4.47 down FXR1 fragile X mental retardation, autosomal homolog 1 NM_001013438 /// NM_001013439 /// NM_005087

1556831_at 4.77 down DYNC1H1 Dynein, cytoplasmic 1, heavy chain 1 NM_001376

235469_at 5.25 down

FAM133B ///

LOC728153 ///

LOC728408 family with sequence similarity 133, member B /// similar to FAM133B protein

NM_001040057 /// NM_152789 /// XM_001128002 ///

XM_001722995 /// XR_015598 /// XR_015778 /// XR_039142

243095_at 2.01 up Transcribed locus

240250_at 2.01 up Transcribed locus

221686_s_at 2.01 up RECQL5 RecQ protein-like 5 NM_001003715 /// NM_001003716 /// NM_004259

230092_at 2.03 up UBXD3 UBX domain containing 3 NM_152376

230904_at 2.04 up FSD1L fibronectin type III and SPRY domain containing 1-like NM_031919 /// NM_207647

206759_at 2.05 up FCER2 Fc fragment of IgE, low affinity II, receptor for (CD23) NM_002002

207034_s_at 2.07 up GLI2 GLI-Kruppel family member GLI2 NM_005270

1562434_at 2.08 up UNK unkempt homolog (Drosophila) NM_001080419

216211_at 2.08 up MRNA; cDNA DKFZp564A023 (from clone DKFZp564A023)

221732_at 2.09 up CANT1 calcium activated nucleotidase 1 NM_138793

1555742_at 2.11 up

216428_x_at 2.12 up KIR3DX1 killer cell immunoglobulin-like receptor, three domains, X1 NM_001047605

233528_s_at 2.14 up

LOC652968 ///

TBC1D10A TBC1 domain family, member 10A /// hypothetical protein LOC652968 NM_001037666 /// NM_031937

243985_at 2.22 up GTF2A2 general transcription factor IIA, 2, 12kDa NM_004492

210387_at 2.27 up HIST1H2BG histone cluster 1, H2bg NM_003518

211110_s_at 2.32 up AR

androgen receptor (dihydrotestosterone receptor; testicular feminization; spinal

and bulbar muscular atrophy; Kennedy disease) NM_000044 /// NM_001011645

213411_at 2.48 up ADAM22 ADAM metallopeptidase domain 22

NM_004194 /// NM_016351 /// NM_021721 /// NM_021722 ///

NM_021723

243403_x_at 2.68 up CPM carboxypeptidase M NM_001005502 /// NM_001874 /// NM_198320

244440_at 2.77 up

Page 30: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

223971_at 2.79 up

OR2A20P /// OR2A5 ///

OR2A9P

olfactory receptor, family 2, subfamily A, member 5 /// olfactory receptor, family

2, subfamily A, member 20 pseudogene /// olfactory receptor, family 2,

subfamily A, member 9 pseudogene NM_012365 /// NR_002157 /// NR_002158

214909_s_at 2.89 up DDAH2 dimethylarginine dimethylaminohydrolase 2 NM_013974

207796_x_at 2.93 up KLRD1 killer cell lectin-like receptor subfamily D, member 1 NM_001114396 /// NM_002262 /// NM_007334

224052_at 2.93 up HSFY1 /// HSFY2

heat shock transcription factor, Y-linked 1 /// heat shock transcription factor, Y

linked 2

NM_001001877 /// NM_033108 /// NM_152584 ///

NM_153716 /// NR_003509 /// NR_003510

232096_x_at 3.04 up CDNA: FLJ22140 fis, clone HEP20977

220791_x_at 3.34 up SCN11A sodium channel, voltage-gated, type XI, alpha subunit NM_014139

207558_s_at 3.54 up PITX2 paired-like homeodomain 2 NM_000325 /// NM_153426 /// NM_153427

227253_at 3.88 up CP ceruloplasmin (ferroxidase) NM_000096

Page 31: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

Supplemental Table 1b. Differential Gene Expression Profile of AdEHCD40L vs. AdEHNull Infected Cells

Probe Set ID

Fold change

([AdEHCD40L]

vs [AdEHNull])

Regulation

([AdEHCD40L]

vs [AdEHNull]) Gene Symbol Gene Title RefSeq Transcript ID

1569594_a_at 2.00 down SDCCAG1 serologically defined colon cancer antigen 1 NM_004713

234330_at 2.00 down CDNA FLJ14081 fis, clone HEMBB1002280

1555368_x_at 2.01 down ZNF479 zinc finger protein 479 NM_033273 /// XM_001714591 /// XM_001719979

203942_s_at 2.01 down MARK2 MAP/microtubule affinity-regulating kinase 2 NM_001039468 /// NM_001039469 /// NM_004954 /// NM_017490

227182_at 2.02 down SUSD3 sushi domain containing 3 NM_145006

1553142_at 2.02 down C13orf31 chromosome 13 open reading frame 31 NM_153218

242578_x_at 2.02 down SLC22A3 Solute carrier family 22 (extraneuronal monoamine transporter), member 3 NM_021977

235419_at 2.02 down Transcribed locus

212601_at 2.02 down ZZEF1 zinc finger, ZZ-type with EF-hand domain 1 NM_015113

213729_at 2.03 down PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) NM_017892

233019_at 2.03 down CNOT7 CCR4-NOT transcription complex, subunit 7 NM_013354 /// NM_054026

209062_x_at 2.03 down NCOA3 nuclear receptor coactivator 3 NM_006534 /// NM_181659

202255_s_at 2.03 down SIPA1L1 signal-induced proliferation-associated 1 like 1 NM_015556

214987_at 2.03 down CDNA clone IMAGE:4801326

202368_s_at 2.04 down TRAM2 translocation associated membrane protein 2 NM_012288

223208_at 2.04 down KCTD10 potassium channel tetramerisation domain containing 10 NM_031954

1570445_a_at 2.04 down LOC643201 hypothetical protein LOC643201 XM_001716444 /// XM_001717933 /// XM_932161

241627_x_at 2.04 down FLJ10357 hypothetical protein FLJ10357 NM_018071

238089_at 2.04 down MAN2C1 mannosidase, alpha, class 2C, member 1 NM_006715

224736_at 2.05 down CCAR1 cell division cycle and apoptosis regulator 1 NM_018237

211753_s_at 2.06 down RLN1 relaxin 1 NM_006911

205346_at 2.06 down ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 NM_006927

215623_x_at 2.06 down SMC4 structural maintenance of chromosomes 4 NM_001002800 /// NM_005496

218245_at 2.06 down TSKU tsukushin NM_015516

1558743_at 2.06 down ZNF620 zinc finger protein 620 NM_175888

222573_s_at 2.07 down SAV1 salvador homolog 1 (Drosophila) NM_021818

203638_s_at 2.08 down FGFR2 fibroblast growth factor receptor 2 (bacteria-expressed kinase, keratinocyte growth factor receptor, craniofacial dysostosis 1, Crouzon syndrome, Pfeiffer syndrome, Jackson-Weiss syndrome)NM_000141 /// NM_022970

217985_s_at 2.08 down BAZ1A bromodomain adjacent to zinc finger domain, 1A NM_013448 /// NM_182648

244287_at 2.09 down SFRS12 splicing factor, arginine/serine-rich 12 NM_001077199 /// NM_139168

217951_s_at 2.09 down PHF3 PHD finger protein 3 NM_015153

236621_at 2.09 down LOC100130070 /// LOC100130775 /// LOC100131787 /// LOC100131905 /// LOC100132291 /// LOC100132488 /// RPS27ribosomal protein S27 (metallopanstimulin 1) /// similar to metallopanstimulin /// similar to rCG63653 /// similar to hCG2027326

NM_001030 /// XM_001721002 /// XM_001722161 /// XM_001722965 /// XM_001723889 /// XM_001726077 /// XM_001726895 ///

XR_037624 /// XR_037631 /// XR_037683 /// XR_038381 /// XR_038623 /// XR_038822 /// XR_039334 /// XR_039557 /// XR_039685

/// XR_039693 /// XR_042325 /// XR_042403

225642_at 2.10 down KTI12 KTI12 homolog, chromatin associated (S. cerevisiae) NM_138417

214130_s_at 2.10 down PDE4DIP phosphodiesterase 4D interacting protein (myomegalin) NM_001002810 /// NM_001002811 /// NM_001002812 /// NM_014644 /// NM_022359

206555_s_at 2.11 down THUMPD1 THUMP domain containing 1 NM_017736

228766_at 2.12 down

242091_at 2.12 down ZNF720 zinc finger protein 720 NM_001004300

201439_at 2.13 down GBF1 golgi-specific brefeldin A resistance factor 1 NM_004193

227684_at 2.15 down S1PR2 sphingosine-1-phosphate receptor 2 NM_004230

238761_at 2.16 down Transcribed locus

216809_at 2.17 down CYLC1 cylicin, basic protein of sperm head cytoskeleton 1 NM_021118

244145_at 2.18 down Transcribed locus

231852_at 2.19 down THEX1 three prime histone mRNA exonuclease 1 NM_153332

241446_at 2.19 down ADAM28 ADAM metallopeptidase domain 28 NM_014265 /// NM_021777

228173_at 2.20 down GNAS GNAS complex locus NM_000516 /// NM_001077488 /// NM_001077489 /// NM_001077490 /// NM_016592 /// NM_080425 /// NM_080426 /// NR_003259

230928_at 2.21 down Transcribed locus

203952_at 2.23 down ATF6 activating transcription factor 6 NM_007348

208993_s_at 2.23 down PPIG peptidylprolyl isomerase G (cyclophilin G) NM_004792

218895_at 2.24 down GPATCH3 G patch domain containing 3 NM_022078

227254_at 2.27 down POU2F1 POU class 2 homeobox 1 NM_002697

233391_at 2.27 down CDH26 cadherin-like 26 NM_021810 /// NM_177980

205240_at 2.28 down GPSM2 G-protein signaling modulator 2 (AGS3-like, C. elegans) NM_013296

216944_s_at 2.29 down ITPR1 inositol 1,4,5-triphosphate receptor, type 1 NM_001099952 /// NM_002222

226034_at 2.30 down Homo sapiens, clone IMAGE:3881549, mRNA

223260_s_at 2.31 down POLK polymerase (DNA directed) kappa NM_016218

230060_at 2.32 down CDCA7 cell division cycle associated 7 NM_031942 /// NM_145810

232213_at 2.33 down PELI1 Pellino homolog 1 (Drosophila) NM_020651

226745_at 2.33 down CYP4V2 cytochrome P450, family 4, subfamily V, polypeptide 2 NM_207352

235245_at 2.34 down TMEM92 transmembrane protein 92 NM_153229

210088_x_at 2.34 down MYL4 myosin, light chain 4, alkali; atrial, embryonic NM_001002841 /// NM_002476

226673_at 2.35 down SH2D3C SH2 domain containing 3C NM_005489 /// NM_170600

228789_at 2.35 down MTMR6 myotubularin related protein 6 NM_004685

220839_at 2.38 down METTL5 methyltransferase like 5 NM_014168

236302_at 2.39 down PPM1E protein phosphatase 1E (PP2C domain containing) NM_014906

228492_at 2.40 down LOC100130216 /// USP9Yubiquitin specific peptidase 9, Y-linked (fat facets-like, Drosophila) /// hypothetical protein LOC100130216NM_004654 /// XM_001713696

210944_s_at 2.41 down CAPN3 calpain 3, (p94)

NM_000070 /// NM_024344 /// NM_173087 /// NM_173088 /// NM_173089 /// NM_173090 /// NM_212464 /// NM_212465 ///

NM_212467

243046_at 2.42 down MRNA; cDNA DKFZp564H0616 (from clone DKFZp564H0616)

235985_at 2.44 down Transcribed locus

1553960_at 2.46 down SNX21 sorting nexin family member 21 NM_001042632 /// NM_001042633 /// NM_033421 /// NM_152897

207722_s_at 2.48 down BTBD2 BTB (POZ) domain containing 2 NM_017797

215587_x_at 2.50 down CDNA FLJ13829 fis, clone THYRO1000625

207199_at 2.56 down TERT telomerase reverse transcriptase NM_198253 /// NM_198255

201991_s_at 2.57 down KIF5B kinesin family member 5B NM_004521

Page 32: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

217650_x_at 2.59 down ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 NM_006927

1560812_at 2.60 down Homo sapiens, clone IMAGE:5170902, mRNA

1554619_at 2.63 down LOC153364 similar to metallo-beta-lactamase superfamily protein NM_203406

205025_at 2.65 down ZBTB48 zinc finger and BTB domain containing 48 NM_005341

204451_at 2.67 down FZD1 frizzled homolog 1 (Drosophila) NM_003505

210649_s_at 2.69 down ARID1A AT rich interactive domain 1A (SWI-like) NM_006015 /// NM_139135

200842_s_at 2.70 down EPRS glutamyl-prolyl-tRNA synthetase NM_004446

222667_s_at 2.82 down ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) NM_018489

Page 33: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

240108_at 2.86 down Transcribed locus

208144_s_at 2.96 down

231763_at 2.99 down POLR3A polymerase (RNA) III (DNA directed) polypeptide A, 155kDa NM_007055

1556891_at 2.99 down SORCS1 sortilin-related VPS10 domain containing receptor 1 NM_001013031 /// NM_052918

219949_at 3.04 down LRRC2 leucine rich repeat containing 2 NM_024512 /// NM_024750

244347_at 3.05 down Transcribed locus

213938_at 3.43 down ERC2 ELKS/RAB6-interacting/CAST family member 2 NM_015576

224520_s_at 3.63 down BEST3 bestrophin 3 NM_032735 /// NM_152439

1553493_a_at 5.27 down TDH L-threonine dehydrogenase NR_001578

244658_at 2.00 up Transcribed locus

222105_s_at 2.01 up NKIRAS2 NFKB inhibitor interacting Ras-like 2 NM_001001349 /// NM_017595

242274_x_at 2.01 up SLC25A42 solute carrier family 25, member 42 NM_178526

217465_at 2.01 up NCKAP1 NCK-associated protein 1 NM_013436 /// NM_205842

1561303_at 2.01 up CDNA clone IMAGE:4828317

1554518_at 2.01 up GSTCD glutathione S-transferase, C-terminal domain containing NM_001031720 /// NM_024751

228392_at 2.01 up ZNF302 zinc finger protein 302 NM_001012320 /// NM_018443

221419_s_at 2.02 up

239831_at 2.02 up TMEM106C Transmembrane protein 106C NM_024056

1565939_at 2.02 up C5orf22 chromosome 5 open reading frame 22 NM_018356

233195_at 2.02 up DNAI1 dynein, axonemal, intermediate chain 1 NM_012144

1566402_at 2.02 up SNORA68 small nucleolar RNA, H/ACA box 68 NR_000012

229630_s_at 2.03 up WTAP Wilms tumor 1 associated protein NM_004906 /// NM_152857 /// NM_152858

213957_s_at 2.03 up CEP350 centrosomal protein 350kDa NM_014810

214694_at 2.03 up LOC729143 /// M-RIP myosin phosphatase-Rho interacting protein /// similar to Myosin phosphatase Rho-interacting protein (Rho-interacting protein 3) (M-RIP) (RIP3) (p116Rip)NM_015134 /// NM_201274 /// XR_015907 /// XR_015979 /// XR_037739

229918_at 2.04 up CCDC40 coiled-coil domain containing 40 NM_017950

1566809_a_at 2.04 up CDNA clone IMAGE:5272727

243345_at 2.04 up Transcribed locus

202015_x_at 2.04 up

209960_at 2.04 up HGF hepatocyte growth factor (hepapoietin A; scatter factor) NM_000601 /// NM_001010931 /// NM_001010932 /// NM_001010933 /// NM_001010934

207081_s_at 2.04 up PI4KA phosphatidylinositol 4-kinase, catalytic, alpha NM_002650 /// NM_058004 /// XM_001721947

235167_at 2.04 up DKFZp547E087 hypothetical gene LOC283846 XM_496136 /// XM_931802 /// XM_931808 /// XM_931814 /// XM_931818 /// XM_931827 /// XM_931837 /// XM_931840

230766_at 2.04 up Transcribed locus

240673_at 2.05 up Transcribed locus

225542_at 2.06 up CENTB5 centaurin, beta 5 NM_030649

232197_x_at 2.06 up ARSB arylsulfatase B NM_000046 /// NM_198709

1563715_at 2.06 up MRNA; cDNA DKFZp761B0221 (from clone DKFZp761B0221)

205688_at 2.07 up TFAP4 transcription factor AP-4 (activating enhancer binding protein 4) NM_003223

225589_at 2.07 up SH3RF1 SH3 domain containing ring finger 1 NM_020870

238040_at 2.07 up Transcribed locus

223823_at 2.07 up KCNMB2 potassium large conductance calcium-activated channel, subfamily M, beta member 2NM_005832 /// NM_181361

228884_at 2.07 up LOC728799 /// LRRC27 leucine rich repeat containing 27 /// similar to leucine rich repeat containing 27 NM_030626 /// XM_001132728

236796_at 2.07 up BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 NM_021813

210105_s_at 2.08 up FYN FYN oncogene related to SRC, FGR, YES NM_002037 /// NM_153047 /// NM_153048

238778_at 2.08 up MPP7 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) NM_173496

1557236_at 2.08 up APOL6 apolipoprotein L, 6 NM_030641

1552532_a_at 2.08 up ATP6V1C2 ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 NM_001039362 /// NM_144583

1553315_at 2.08 up SLFNL1 schlafen-like 1 NM_144990

1569753_at 2.08 up CDNA clone IMAGE:4828604

241756_at 2.08 up CDNA FLJ30650 fis, clone CTONG2006666

230131_x_at 2.08 up ARSD arylsulfatase D NM_001669 /// NM_009589

231577_s_at 2.09 up GBP1 guanylate binding protein 1, interferon-inducible, 67kDa NM_002053

1560712_at 2.09 up TMPRSS11B transmembrane protease, serine 11B NM_182502

236223_s_at 2.09 up RIT1 Ras-like without CAAX 1 NM_006912

204529_s_at 2.09 up TOX thymocyte selection-associated high mobility group box NM_014729

243378_at 2.10 up Transcribed locus

238057_at 2.10 up USP45 ubiquitin specific peptidase 45 NM_001080481

229606_at 2.11 up Transcribed locus

234219_at 2.11 up CDNA: FLJ21345 fis, clone COL02694

1557593_at 2.11 up SPAG17 Sperm associated antigen 17 NM_206996

227167_s_at 2.11 up Mesenchymal stem cell protein DSC96

242256_x_at 2.11 up

1553157_at 2.11 up LHX4 LIM homeobox 4 NM_033343

227499_at 2.11 up CDNA clone IMAGE:5311370

1559406_at 2.12 up ANKRD18A ankyrin repeat domain 18A XM_001713970 /// XM_001717620 /// XM_001726105

226400_at 2.12 up CDC42 Cell division cycle 42 (GTP binding protein, 25kDa) NM_001039802 /// NM_001791 /// NM_044472

229504_at 2.12 up Transcribed locus

244811_at 2.12 up MRNA; cDNA DKFZp779F0411 (from clone DKFZp779F0411)

210985_s_at 2.12 up SP100 SP100 nuclear antigen NM_001080391 /// NM_003113

1552520_at 2.13 up TMEM74 transmembrane protein 74 NM_153015

216783_at 2.13 up CDNA: FLJ21899 fis, clone HEP03467

227338_at 2.13 up LOC440983 hypothetical gene supported by BC066916 XM_498946 /// XM_944951

219172_at 2.13 up UBTD1 ubiquitin domain containing 1 NM_024954

217484_at 2.13 up CR1 complement component (3b/4b) receptor 1 (Knops blood group) NM_000573 /// NM_000651

236149_at 2.13 up Transcribed locus

228011_at 2.15 up FAM92A1 family with sequence similarity 92, member A1 NM_145269

214066_x_at 2.15 up NPR2 natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B)NM_003995

208604_s_at 2.16 up HOXA3 homeobox A3 NM_030661 /// NM_153631 /// NM_153632

242883_at 2.16 up OTOS otospiralin NM_148961

243553_x_at 2.17 up Transcribed locus

222227_at 2.17 up GPER G protein-coupled estrogen receptor 1 NM_001039966 /// NM_001098201 /// NM_001505

229461_x_at 2.17 up NEGR1 neuronal growth regulator 1 NM_173808

Page 34: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

210538_s_at 2.17 up BIRC3 baculoviral IAP repeat-containing 3 NM_001165 /// NM_182962

235497_at 2.17 up LOC643837 hypothetical LOC643837 NR_015368 /// XM_927114 /// XM_936770

233495_at 2.17 up EXOSC3 /// SHB Src homology 2 domain containing adaptor protein B /// exosome component 3 NM_001002269 /// NM_003028 /// NM_016042

229067_at 2.17 up SRGAP2P1 SLIT-ROBO Rho GTPase activating protein 2 pseudogene 1

232831_at 2.18 up CDNA FLJ11910 fis, clone HEMBB1000113

243427_at 2.18 up Transcribed locus

229905_at 2.19 up RAP1GDS1 RAP1, GTP-GDP dissociation stimulator 1 NM_001100426 /// NM_001100427 /// NM_001100428 /// NM_001100429 /// NM_001100430 /// NM_021159

241804_at 2.19 up Transcribed locus

240089_at 2.19 up Transcribed locus

213757_at 2.20 up Transcribed locus, weakly similar to XP_001478155.1 PREDICTED: hypothetical protein [Mus musculus]

234170_at 2.20 up CDNA FLJ20169 fis, clone COL09536

202270_at 2.20 up GBP1 guanylate binding protein 1, interferon-inducible, 67kDa NM_002053

227701_at 2.20 up C10orf118 chromosome 10 open reading frame 118 NM_018017

228222_at 2.20 up Transcribed locus

202890_at 2.20 up MAP7 microtubule-associated protein 7 NM_003980

233513_at 2.20 up CDNA FLJ12999 fis, clone NT2RP3000324

243112_at 2.20 up Transcribed locus

220330_s_at 2.21 up SAMSN1 SAM domain, SH3 domain and nuclear localization signals 1 NM_022136

235890_at 2.21 up Transcribed locus

244225_x_at 2.23 up LMNA Lamin A/C NM_005572 /// NM_170707 /// NM_170708

209312_x_at 2.23 up hCG_1998957 /// HLA-DQB1 /// HLA-DQB2 /// HLA-DRB1 /// HLA-DRB2 /// HLA-DRB3 /// HLA-DRB4 /// HLA-DRB5 /// LOC100133484 /// LOC100133583 /// LOC100133661 /// LOC100133811 /// LOC730415 /// RNASE2 /// ZNF749major histocompatibility complex, class II, DQ beta 1 /// major histocompatibility complex, class II, DQ beta 2 /// major histocompatibility complex, class II, DR beta 1 /// major histocompatibility complex, class II, DR beta 2 (pseudogene) /// major histocompatibility complex, class II, DR beta 3 /// major histocompatibility complex, class II, DR beta 4 /// major histocompatibility complex, class II, DR beta 5 /// ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin) /// zinc finger protein 749 /// hypothetical protein LOC730415 /// similar to Major histocompatibility complex, class II, DR beta 4 /// similar to major histocompatibility complex, class II, DQ beta 1 /// similar to HLA class II histocompatibility antigen, DR-W53 beta chain /// similar to hCG1992647

NM_001023561 /// NM_002123 /// NM_002124 /// NM_002125 /// NM_002934 /// NM_021983 /// NM_022555 /// NR_003937 ///

XM_001124749 /// XM_001713857 /// XM_001713867 /// XM_001714067 /// XM_001714074 /// XM_001718754 /// XM_001719473 ///

XM_001720834 /// XM_001720835 /// XM_001720843 /// XM_001722124 /// XM_001722127 /// XM_001722253 /// XM_001723414 ///

XM_001723417 /// XM_001723419 /// XM_001723447

230795_at 2.23 up Transcribed locus

1555978_s_at 2.24 up CDNA FLJ33153 fis, clone UTERU2000332

236350_at 2.24 up Transcribed locus

222006_at 2.24 up LETM1 Leucine zipper-EF-hand containing transmembrane protein 1 NM_012318

1556301_at 2.25 up CDNA clone IMAGE:5288145

207908_at 2.26 up KRT2 keratin 2 (epidermal ichthyosis bullosa of Siemens) NM_000423

216051_x_at 2.27 up CDNA FLJ14139 fis, clone MAMMA1002830

221349_at 2.27 up VPREB1 pre-B lymphocyte gene 1 NM_007128

1566764_at 2.27 up 7A5 putative binding protein 7a5 NM_182762

229334_at 2.27 up Transcribed locus

244408_at 2.27 up Transcribed locus

202903_at 2.27 up LSM5 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) NM_012322

1568864_at 2.28 up LOC100131691 hypothetical protein LOC100131691 XM_001718612 /// XM_001718643 /// XM_001719058

241360_at 2.28 up CCDC15 coiled-coil domain containing 15 NM_025004

208733_at 2.28 up RAB2A RAB2A, member RAS oncogene family NM_002865

1559064_at 2.30 up NUP153 nucleoporin 153kDa NM_005124

217363_x_at 2.30 up

227405_s_at 2.31 up FZD8 frizzled homolog 8 (Drosophila) NM_031866

215786_at 2.31 up CDNA FLJ12108 fis, clone MAMMA1000009

1566146_x_at 2.32 up CDNA FLJ41018 fis, clone UTERU2018881

239678_at 2.32 up Transcribed locus

213922_at 2.33 up TTBK2 tau tubulin kinase 2 NM_173500

1557810_at 2.33 up Clone HEA5 Cri-du-chat critical region mRNA

1557116_at 2.34 up APOL6 apolipoprotein L, 6 NM_030641

216383_at 2.34 up LOC285053 /// LOC390354 /// RPL18Aribosomal protein L18a /// similar to ribosomal protein L18a /// ribosomal protein L18a pseudogene

NM_000980 /// NR_001593 /// XM_001725506 /// XM_001725508 /// XM_208281 /// XM_934020 /// XM_941835 /// XM_945469 ///

XR_042140 /// XR_042141

227351_at 2.34 up C16orf52 chromosome 16 open reading frame 52 NM_173501

1554793_at 2.36 up UBE3C ubiquitin protein ligase E3C NM_014671

231174_s_at 2.36 up Transcribed locus

228734_at 2.36 up CDNA FLJ41934 fis, clone PERIC2005111

235472_at 2.36 up FUT10 fucosyltransferase 10 (alpha (1,3) fucosyltransferase) NM_032664

214260_at 2.38 up COPS8 COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis) NM_006710 /// NM_198189

235759_at 2.40 up Transcribed locus

214690_at 2.41 up TAF1B TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDaNM_005680

201324_at 2.43 up EMP1 epithelial membrane protein 1 NM_001423

203898_at 2.44 up RCP9 calcitonin gene-related peptide-receptor component protein NM_001040647 /// NM_001040648 /// NM_014478

1569588_x_at 2.45 up PIK3C2A Phosphoinositide-3-kinase, class 2, alpha polypeptide NM_002645

211371_at 2.45 up MAP2K5 mitogen-activated protein kinase kinase 5 NM_002757 /// NM_145160

1557012_a_at 2.46 up CDNA clone IMAGE:4816709

203178_at 2.48 up GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase) NM_001482

238785_at 2.48 up Transcribed locus

222803_at 2.49 up PRTFDC1 phosphoribosyl transferase domain containing 1 NM_020200

1557145_at 2.50 up STK38 Serine/threonine kinase 38 NM_007271

242962_at 2.50 up

223661_at 2.50 up LOC100130123 /// NUCKS1nuclear casein kinase and cyclin-dependent kinase substrate 1 /// PRO2870 NM_022731 /// XM_001724068 /// XM_001724822 /// XM_001726844

1563849_at 2.51 up SH2D4B SH2 domain containing 4B NM_207372

218181_s_at 2.51 up MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 NM_004834 /// NM_145686 /// NM_145687

207014_at 2.51 up GABRA2 gamma-aminobutyric acid (GABA) A receptor, alpha 2 NM_000807 /// NM_001114175

216659_at 2.51 up LOC1720 dihydrofolate reductase pseudogene

241910_x_at 2.51 up LOC400590 hypothetical LOC400590 XR_042032 /// XR_042033 /// XR_042034

223781_x_at 2.52 up ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide NM_000670

1560609_at 2.52 up CRYZL1 crystallin, zeta (quinone reductase)-like 1 NM_145858

1405_i_at 2.55 up CCL5 chemokine (C-C motif) ligand 5 NM_002985

238673_at 2.56 up SAMD12 Sterile alpha motif domain containing 12 NM_001101676 /// NM_207506

228143_at 2.56 up CP /// LOC100132553 ceruloplasmin (ferroxidase) /// similar to Ceruloplasmin precursor (Ferroxidase) NM_000096 /// XR_038870 /// XR_038875 /// XR_038881

227621_at 2.56 up Transcribed locus

212952_at 2.56 up Transcribed locus

Page 35: ([AdEHCD40L] [Untreated]) Gene Symbol Gene Title RefSeq ... · 227254_at 3.15 down 1.39 down POU2F1 POU class 2 homeobox 1 NM_002697 236090_at 2.16 down 1.39 down Transcribed locus

240217_s_at 2.56 up Transcribed locus

226441_at 2.57 up CDNA FLJ36574 fis, clone TRACH2012376

207951_at 2.58 up CSN2 casein beta NM_001891

1560973_a_at 2.59 up Full length insert cDNA clone ZD78G02

236235_at 2.62 up ITCH Itchy E3 ubiquitin protein ligase homolog (mouse) NM_031483

238515_at 2.62 up CDNA FLJ34034 fis, clone FCBBF2004671

244467_at 2.67 up C22:CTA-250D10.9 transmembrane protein 46-like XM_496530 /// XM_940479

1563118_at 2.68 up CDNA: FLJ20923 fis, clone ADSE00893

228594_at 2.69 up C5orf33 chromosome 5 open reading frame 33 NM_001085411 /// NM_153013

234685_x_at 2.72 up KRTAP4-9 keratin associated protein 4-9 XM_001715848 /// XM_001716829

233613_x_at 2.72 up REXO2 REX2, RNA exonuclease 2 homolog (S. cerevisiae) NM_015523

244396_at 2.73 up G3BP1 GTPase activating protein (SH3 domain) binding protein 1 NM_005754 /// NM_198395

230233_at 2.75 up Transcribed locus

223463_at 2.82 up RAB23 RAB23, member RAS oncogene family NM_016277 /// NM_183227

239435_x_at 2.83 up SHROOM1 shroom family member 1 NM_133456

239891_x_at 2.84 up RAB12 RAB12, member RAS oncogene family NM_001025300

217662_x_at 2.85 up Transcribed locus

1564338_at 2.89 up CDNA FLJ40450 fis, clone TESTI2040944

205463_s_at 2.92 up PDGFA platelet-derived growth factor alpha polypeptide NM_002607 /// NM_033023

232681_at 3.02 up CDNA: FLJ23242 fis, clone COL01514

241684_at 3.03 up Transcribed locus

233193_x_at 3.03 up INTS4 integrator complex subunit 4 NM_033547

1569409_x_at 3.04 up CDNA clone IMAGE:4798202

235800_at 3.06 up CDNA FLJ34029 fis, clone FCBBF2003636

243783_at 3.07 up CDNA FLJ36183 fis, clone TESTI2026854

235264_at 3.10 up HCFC2 host cell factor C2 NM_013320

228498_at 3.12 up Transcribed locus, strongly similar to XP_531236.1 PREDICTED: hypothetical protein [Pan troglodytes]

242442_x_at 3.18 up RG9MTD2 RNA (guanine-9-) methyltransferase domain containing 2 NM_152292

1559293_x_at 3.20 up C9orf14 Chromosome 9 open reading frame 14 XM_376821 /// XM_938938

239380_at 3.22 up C5orf27 chromosome 5 open reading frame 27 XR_040298 /// XR_040299 /// XR_040300 /// XR_040301 /// XR_040302 /// XR_040303

238495_at 3.27 up CDNA FLJ41444 fis, clone BRSTN2001801

232412_at 3.32 up CDNA: FLJ21037 fis, clone CAE10055

230207_s_at 3.42 up DOCK5 Dedicator of cytokinesis 5 NM_024940

217574_at 3.44 up CDH8 cadherin 8, type 2 NM_001796

1557878_at 3.45 up CDNA clone IMAGE:5267797

1558048_x_at 3.57 up

240088_at 3.57 up PDE5A phosphodiesterase 5A, cGMP-specific NM_001083 /// NM_033430 /// NM_033437

211122_s_at 4.32 up CXCL11 chemokine (C-X-C motif) ligand 11 NM_005409

210163_at 4.93 up CXCL11 chemokine (C-X-C motif) ligand 11 NM_005409

204533_at 5.34 up CXCL10 chemokine (C-X-C motif) ligand 10 NM_001565

203915_at 6.09 up CXCL9 chemokine (C-X-C motif) ligand 9 NM_002416