a new flora fauna mycota should

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What should a flora/fauna/mycota of the future be able to do for me? William Ulate BHL Technical Director Global BHL Coordinator Berlin, Germany May 21, 2013

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"What should a flora/fauna/mycota of the future be able to do for me?" My flash talk presentation during pro-iBiosphere Workshops in Berlin, 21 May 2013.

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Page 1: A new flora fauna mycota should

What should a flora/fauna/mycota of the future be able to do for me?

William UlateBHL Technical Director

Global BHL Coordinator

Berlin, GermanyMay 21, 2013

Page 2: A new flora fauna mycota should

Global…

Page 3: A new flora fauna mycota should

New Partners and Geographies

Page 4: A new flora fauna mycota should

Dear Sir / Madam Can i just congratulate you on an absolutely brilliant online resource. I am compiling a report on an invasive hydromedusae and could not believe the ease and efficiency of this web page which genuinely saved me weeks of my life

Dear Sir / Madam Can i just congratulate you on an absolutely brilliant online resource. I am compiling a report on an invasive hydromedusae and could not believe the ease and efficiency of this web page which genuinely saved me weeks of my life

Research that previously took months now takes only a few hours

Research that previously took months now takes only a few hours

La plus grande #bibliotheque #botanique & #zoologique online The largest online botanical & zoological #library #BHL

La plus grande #bibliotheque #botanique & #zoologique online The largest online botanical & zoological #library #BHL

The freeing of knowledge may lead to new discoveries and changes in the way the natural world is perceived

The freeing of knowledge may lead to new discoveries and changes in the way the natural world is perceived

Page 5: A new flora fauna mycota should

22.00

40.00

84.86

94.6

105.85

9.2 16.4

31.8 35.4

38.9

-

20

40

60

80

100

120

Oct-08 Oct-09 Oct-10 Oct-11 Oct-12

Pages (Millions) and Volumes (in Thousands) included in BHL

Volumes (K)

Pages (M)

More Online Content

X

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San Francisco

Woods Hole

London

Alexandria

Beijing

Global Replication & ServingReplicated Data Center Portal Application

Page 7: A new flora fauna mycota should

For me a future Flora/Fauna/Mycota should…

learn from (the errors of) the past...

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I may want to find new things later…

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Taxon NamesBEFORE Name Instances 101,591,803 101,288,804Unique Names 7,498,554 7,464,924Verified Names 1,905,507 1,902,803EOL Names 63,130,350 62,963,582EOL Pages 13,579,868 13,532,684 AFTER Name Instances 151,222,182 150,066,425Unique Names 29,246,382 29,091,767Verified Names 10,153,165 10,109,540EOL Names 87,791,695 87,135,089EOL Pages 15,466,713 15,342,867

Page 10: A new flora fauna mycota should

Scientific Name Extraction

• TaxonFinder algorithm in production since 2008– More than 100 million candidate name strings– More than 1.5 million unique, verified names– Available through UI, APIs, Data Exports & Internet

Archive• New collaboration with Global Names

– Improved algorithm, better precision & recall– More data with TaxonFinder and Neti Neti!

Page 11: A new flora fauna mycota should

For me a future Flora/Fauna/Mycota should…

allow me to provide and harvest marked up content with names

of people & organizations, places, taxa,specimens, illustrations, coordinates, citations, tables of context and indexes.

Page 12: A new flora fauna mycota should

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Images

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Crowdsource Markup

Display text Species Profile Model category

General/summary TaxonBiology

Geographic range Distribution

Habitat Habitat

Food sources and feeding behavior TrophicStrategy

Physical description (general) Description

Physical description (detailed morphology) DiagnosticDescription

Page 15: A new flora fauna mycota should

For me a future Flora/Fauna/Mycota should…

be digital, openly and freely accessible, marked up and mark-able by users,

linked and registered ina Common Framework that allows

for gradual crowd-sourced incrementalsemantic enrichment with proper attribution

Page 16: A new flora fauna mycota should
Page 17: A new flora fauna mycota should

> 390,000 views in 10 months

> 1200 sets

> 60,000+ images

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For me a future Flora/Fauna/Mycota should…

be easy to integrate with other knowledge, allow versioning and track changes,hold and show conflicting opinions

Independent of format, mobile enabled & be continually growing.

Page 22: A new flora fauna mycota should

Thank youWilliam UlateGlobal BHL Project Manager / Technical DirectorMissouri Botanical [email protected]: william_ulate_r