201310 springer mexico 120min

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Jeff Robens, PhD Senior Editor Author Academy: Steps to Publica<on Success Entre Pares 8 October 2013 edanzedi7ng.com/entrepares

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Page 1: 201310 springer mexico 120min

Jeff  Robens,  PhD  Senior  Editor  

Author  Academy:    Steps  to  Publica<on  Success  

Entre  Pares  8  October  2013  

edanzedi7ng.com/entrepares  

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About Jeff…

Author  

Senior  Editor  

 

Peer  reviewer  

Cell  biology  

Tissue  engineering  

Neuroscience  

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Why publish in English?

ü  Interna<onal  language  of  academics  

ü  Build  an  interna<onal  reputa<on    ü  Develop  interna<onal  collabora<ons  

ü  Overseas  research  opportuni<es  

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1.    Journal  selec<on  2.    Manuscript  structure  

3.   Targe<ng  the  journal  4.    Effec<ve  wri<ng  5.    Cover  leOers  6.    Peer  review  

Today’s presentation …

Page 5: 201310 springer mexico 120min

Edanz survey results – Primary difficulty during manuscript preparation

n  =  333  published  non-­‐na7ve  English  authors  

Choosing  a  journal  

Expressing  thoughts  clearly  in  English  

Understanding  the  author  guidelines  

FormaKng  according  to  the  guidelines  

118  

79  

73  

63  

35.4%  

23.7%  

21.9%  

18.9%  

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Journal  selec3on  

Section 1

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Journal  selec7on   Timing

Choose  your  target  journal:  – A#er  you  have  decided  you  have  enough  results  for  a  publica7on    

– A#er  you  have  decided  on  how  high  to  aim—high,  medium  or  low  impact  

– A#er  you  have  decided  how  broadly  relevant  your  findings  are  

– Before  wri7ng  the  Title,  Abstract,  Introduc7on  or  Discussion  sec7ons  

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Journal  selec7on   Tenga en cuenta los diferentes factores de cada revista

Aims  &  scope   Readership  

Open  access   Indexing  

Which  factor  is  most  important  to  you?  

Publica<on  frequency  

Impact  factor  

Varies  by  field  

Page 9: 201310 springer mexico 120min

Journal  selec7on   Choosing a target journal

Honestamente  evalue  la  importancia    de  su  inves3gación  

 

Significance   Aims  and  Scope  Impact  

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Journal  selec7on   Evaluating significance

How  new  are  your  findings?  Novelty  

How  broadly  relevant  are  your  findings?  Relevance  

What  are  the  important  real-­‐world  applica<ons?  Appeal  

Page 11: 201310 springer mexico 120min

Journal  selec7on  

Insert  your  proposed  abstract  

El  Journal  Selector  ayuda  a  elegir    la  publicacion  más  adecuada  

Journal Selector – www.edanzediting.com/journal_selector

Page 12: 201310 springer mexico 120min

Journal  selec7on  

Recommended  journals  

Filter  by:  Impact  factor  

Publishing  frequency  Open  access  

Journal Selector – www.edanzediting.com/journal_selector

Page 13: 201310 springer mexico 120min

Journal  selec7on  

Seman<c  matching  terms  

Journals  IF,  Aims  &  Scope,    and  Frequency  

Similar  published  ar<cles  

Have  they  published  similar  ar<cles  recently?  Have  you  cited  some  of  these  ar<cles?  

Journal Selector – www.edanzediting.com/journal_selector

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Journal  selec7on   Visit journal websites

Page 15: 201310 springer mexico 120min

Journal  selec7on   Tips to identify the most suitable journal

S  

Iden<fy  the  interests  of  the  journal  editor  

Iden<fy  the  interests  of  the  

readers  

•  Editorials  •  Review  ar<cles  •  Special  issues  

•  Most  viewed  •  Most  cited  

Iden3fica  los  intereses  del  editor  de  la  revista  y  de  los  lectores  en  cada  publicacion  

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Manuscript  structure  

Section 2

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Coverage  and  Staffing  Plan  Manuscript  structure   IMRaD

Ø  Title  Ø  Abstract  Ø  Introduc7on  Ø Methods    

Ø  Results  Ø  and  Ø  Discussion  

The  beginning

The  end

The  middle

Page 18: 201310 springer mexico 120min

Coverage  and  Staffing  Plan  Manuscript  structure  

Important  points  

Summarize  key  finding  Contains  keywords  Less  than  20  words  

Avoid  

Ques<ons  Abbrevia<ons  

“New”  or  “novel”  

Effective titles

El  Gtulo  debe  ser  conciso  y  resumir  su  hallazgos  clave  

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Coverage  and  Staffing  Plan  Manuscript  structure   Abstract

First  impression  of  your  paper  

Importance  of  your  results  

Validity  of  your  conclusions  

Relevance  of    your  aims  

Judge  your  wri<ng  style  

Probably  only  part  that  will  be  read  

Page 20: 201310 springer mexico 120min

Coverage  and  Staffing  Plan  Manuscript  structure   Sections of an abstract

Aims  

Background  

Methods  

Results  

Conclusion  

Why  the  study  was  done  (20%)  

Your  hypothesis  (10%)  

Techniques  (10%)  

Most  important  findings  (40%)  

Conclusion/implica<ons  (20%)  

Concise  summary  of  your  research  

Page 21: 201310 springer mexico 120min

Coverage  and  Staffing  Plan  Manuscript  structure   Unstructured abstract

Our  understanding  of   the  mechanisms  by  which  ducts   and   lobules   develop   is   derived   from  model   organisms   and   three-­‐dimensional   (3D)   cell   culture   models   wherein   mammalian  epithelial   cells   undergo  morphogenesis   to   form  mul7cellular   spheres  with   a   hollow   central  lumen.  However,   the  mechanophysical   proper7es   associated  with  epithelial  morphogenesis  are  poorly  understood.  We  performed  mul7dimensional  live-­‐cell  imaging  analysis  to  track  the  morphogene7c   process   star7ng   from   a   single   cell   to   the   development   of   a   mul7cellular,  spherical   structure   composed   of   polarized   epithelial   cells   surrounding   a   hollow   lumen.  We  report  that   in  addi7on  to  ac7vely  maintaining  apicobasal  polarity,  the  structures  underwent  rota7onal  mo7ons  at  rates  of  15–20  μm/h  and  the  structures  rotated  360°  every  4  h  during  the  early  phase  of  morphogenesis.  Rota7onal  mo7on  was  independent  of  the  cell  cycle,  but  was  blocked  by   loss  of   the  epithelial   polarity  proteins   Scribble  or  Pard3,  or  by   inhibi7on  of  dynein-­‐based  microtubule  motors.  Interes7ngly,  none  of  the  structures  derived  from  human  cancer   underwent   rota7onal   mo7on.   We   found   a   direct   rela7onship   between   rota7onal  mo7on  and  assembly  of  endogenous  basement  membrane  matrix  around  the  3D  structures,  and  that  structures  that  failed  to  rotate  were  defec7ve  in  weaving  exogenous  laminin  matrix.  Dissolu7on   of   basement   membrane   around   mature,   nonrota7ng   acini   restored   rota7onal  movement   and   the   ability   to   assemble   exogenous   laminin.   Thus,   coordinated   rota7onal  movement  is  a  unique  mechanophysical  process  observed  during  normal  3D  morphogenesis  that  regulates  laminin  matrix  assembly  and  is  lost  in  cancer-­‐derived  epithelial  cells.  

Wang  et  al.  PNAS.  2013;  110:  163‒168.  

Page 22: 201310 springer mexico 120min

Coverage  and  Staffing  Plan  Manuscript  structure   Unstructured abstract

Conclusion  Thus,  coordinated  rota7onal  movement  is  a  unique  mechanophysical  process  observed  during  normal  3D  morphogenesis  that  regulates  laminin  matrix  assembly  and  is  lost  in  cancer-­‐derived  epithelial  cells.  

Results  

We   report   that   in   addi7on   to   ac7vely   maintaining   apicobasal   polarity,   the   structures   underwent  rota7onal  mo7ons  at  rates  of  15–20  μm/h  and  the  structures  rotated  360°  every  4  h  during  the  early  phase  of  morphogenesis.  Rota7onal  mo7on  was  independent  of  the  cell  cycle,  but  was  blocked  by  loss  of   the   epithelial   polarity   proteins   Scribble   or   Pard3,   or   by   inhibi7on   of   dynein-­‐based   microtubule  motors.  Interes7ngly,  none  of  the  structures  derived  from  human  cancer  underwent  rota7onal  mo7on.  We   found   a   direct   rela7onship   between   rota7onal   mo7on   and   assembly   of   endogenous   basement  membrane  matrix  around  the  3D  structures,  and  that  structures  that  failed  to  rotate  were  defec7ve  in  weaving   exogenous   laminin  matrix.   Dissolu7on   of   basement  membrane   around  mature,   nonrota7ng  acini  restored  rota7onal  movement  and  the  ability  to  assemble  exogenous  laminin.  

Methods  We  performed  mul7dimensional  live-­‐cell   imaging  analysis  to  track  the  morphogene7c  process  star7ng  from   a   single   cell   to   the   development   of   a   mul7cellular,   spherical   structure   composed   of   polarized  epithelial  cells  surrounding  a  hollow  lumen.    

Background  Our   understanding   of   the   mechanisms   by   which   ducts   and   lobules   develop   is   derived   from   model  organisms  and  three-­‐dimensional  (3D)  cell  culture  models  wherein  mammalian  epithelial  cells  undergo  morphogenesis   to   form   mul7cellular   spheres   with   a   hollow   central   lumen.   However,   the  mechanophysical  proper7es  associated  with  epithelial  morphogenesis  are  poorly  understood.    

Wang  et  al.  PNAS.  2013;  110:  163‒168.  

Escriba  su  reseña    en  secciones  

Page 23: 201310 springer mexico 120min

Coverage  and  Staffing  Plan  Manuscript  structure   Writing your abstract

We   report   that   in   addi7on   to   ac7vely  maintaining   apicobasal   polarity,   the   structures  underwent  rota7onal  mo7ons  at  rates  of  15–20  μm/h  and  the  structures  rotated  360°  every  4  h  during  the  early  phase  of  morphogenesis.  Rota7onal  mo7on  was  independent  of  the  cell  cycle,  but  was  blocked  by   loss  of  the  epithelial  polarity  proteins  Scribble  or  Pard3,  or  by   inhibi7on  of  dynein-­‐based  microtubule  motors.   Interes7ngly,  none  of  the  structures  derived  from  human  cancer  underwent  rota7onal  mo7on.  We  found  a  direct  rela7onship   between   rota7onal   mo7on   and   assembly   of   endogenous   basement  membrane  matrix   around   the   3D   structures,   and   that   structures   that   failed   to   rotate  were   defec7ve   in   weaving   exogenous   laminin   matrix.   Dissolu7on   of   basement  membrane   around   mature,   nonrota7ng   acini   restored   rota7onal   movement   and   the  ability  to  assemble  exogenous  laminin.  

Write  the  results  sec<on  first  

ü  Key  findings  that  directly  support  your  aims  ü  Will  be  interes<ng  to  the  readers  

Wang  et  al.  PNAS.  2013;  110:  163‒168.  

Page 24: 201310 springer mexico 120min

Coverage  and  Staffing  Plan  Manuscript  structure   Writing your abstract

Our  understanding  of   the  mechanisms  by  which  ducts   and   lobules  develop   is   derived  from   model   organisms   and   three-­‐dimensional   (3D)   cell   culture   models   wherein  mammalian  epithelial  cells  undergo  morphogenesis  to  form  mul7cellular  spheres  with  a  hollow   central   lumen.   However,   the   mechanophysical   proper7es   associated   with  epithelial  morphogenesis  are  poorly  understood.    

Write  the  background  sec<on  second  

ü  Explain  why  this  study  needed  to  be  done  

Problem  

Wang  et  al.  PNAS.  2013;  110:  163‒168.  

Page 25: 201310 springer mexico 120min

Coverage  and  Staffing  Plan  Manuscript  structure   Writing your abstract

We  performed  mul7dimensional   live-­‐cell   imaging  analysis   to   track   the  morphogene7c  process   star7ng   from   a   single   cell   to   the   development   of   a   mul7cellular,   spherical  structure  composed  of  polarized  epithelial  cells  surrounding  a  hollow  lumen.    

Write  the  methods  sec<on  third  

ü  General  techniques  used  to  obtain  the  presented  results  

Wang  et  al.  PNAS.  2013;  110:  163‒168.  

Page 26: 201310 springer mexico 120min

Coverage  and  Staffing  Plan  Manuscript  structure   Writing your abstract

Thus,   coordinated   rota7onal   movement   is   a   unique   mechanophysical   process  observed  during  normal  3D  morphogenesis   that   regulates   laminin  matrix  assembly  and  is  lost  in  cancer-­‐derived  epithelial  cells.  

Write  the  conclusion  sec<on  last  

ü  Major  conclusion  that  answers  the  problem  ü  Implica<ons  for  the  readers  

However,   the   mechanophysical   proper<es   associated   with  epithelial  morphogenesis  are  poorly  understood.  

Implica<ons  

Conclusion  

Wang  et  al.  PNAS.  2013;  110:  163‒168.  

Page 27: 201310 springer mexico 120min

Coverage  and  Staffing  Plan  Manuscript  structure   Writing your abstract

Thus,   coordinated   rota7onal   movement   is   a   unique   mechanophysical   process   observed   during  normal   3D   morphogenesis   that   regulates   laminin   matrix   assembly   and   is   lost   in   cancer-­‐derived  epithelial  cells.  

We   report   that   in   addi7on   to   ac7vely   maintaining   apicobasal   polarity,   the   structures   underwent  rota7onal  mo7ons  at  rates  of  15–20  μm/h  and  the  structures  rotated  360°  every  4  h  during  the  early  phase  of  morphogenesis.  Rota7onal  mo7on  was  independent  of  the  cell  cycle,  but  was  blocked  by  loss  of  the  epithelial  polarity  proteins  Scribble  or  Pard3,  or  by  inhibi7on  of  dynein-­‐based  microtubule  motors.   Interes7ngly,   none   of   the   structures   derived   from   human   cancer   underwent   rota7onal  mo7on.  We   found   a   direct   rela7onship   between   rota7onal  mo7on   and   assembly   of   endogenous  basement  membrane  matrix  around  the  3D  structures,  and  that  structures  that  failed  to  rotate  were  defec7ve  in  weaving  exogenous  laminin  matrix.  Dissolu7on  of  basement  membrane  around  mature,  nonrota7ng  acini  restored  rota7onal  movement  and  the  ability  to  assemble  exogenous  laminin.  

We   performed   mul7dimensional   live-­‐cell   imaging   analysis   to   track   the   morphogene7c   process  star7ng   from  a   single   cell   to   the   development   of   a  mul7cellular,   spherical   structure   composed  of  polarized  epithelial  cells  surrounding  a  hollow  lumen.    

Our  understanding  of   the  mechanisms  by  which  ducts  and   lobules  develop   is  derived   from  model  organisms   and   three-­‐dimensional   (3D)   cell   culture   models   wherein   mammalian   epithelial   cells  undergo  morphogenesis   to   form  mul7cellular   spheres  with   a   hollow   central   lumen.  However,   the  mechanophysical  proper7es  associated  with  epithelial  morphogenesis  are  poorly  understood.    

Wang  et  al.  PNAS.  2013;  110:  163‒168.  

Page 28: 201310 springer mexico 120min

Coverage  and  Staffing  Plan  Manuscript  structure   Writing your abstract

Our  understanding  of   the  mechanisms  by  which  ducts  and   lobules  develop   is  derived   from  model  organisms   and   three-­‐dimensional   (3D)   cell   culture   models   wherein   mammalian   epithelial   cells  undergo  morphogenesis   to   form  mul7cellular   spheres  with   a   hollow   central   lumen.  However,   the  mechanophysical   proper7es   associated  with   epithelial  morphogenesis   are   poorly   understood.  We  performed  mul7dimensional   live-­‐cell   imaging  analysis   to   track   the  morphogene7c  process   star7ng  from  a  single  cell  to  the  development  of  a  mul7cellular,  spherical  structure  composed  of  polarized  epithelial   cells   surrounding   a   hollow   lumen.   We   report   that   in   addi7on   to   ac7vely   maintaining  apicobasal   polarity,   the   structures   underwent   rota7onal  mo7ons   at   rates   of   15–20  μm/h   and   the  structures  rotated  360°  every  4  h  during  the  early  phase  of  morphogenesis.  Rota7onal  mo7on  was  independent  of  the  cell  cycle,  but  was  blocked  by  loss  of  the  epithelial  polarity  proteins  Scribble  or  Pard3,   or   by   inhibi7on   of   dynein-­‐based  microtubule  motors.   Interes7ngly,   none   of   the   structures  derived  from  human  cancer  underwent  rota7onal  mo7on.  We  found  a  direct  rela7onship  between  rota7onal   mo7on   and   assembly   of   endogenous   basement   membrane   matrix   around   the   3D  structures,   and   that   structures   that   failed   to   rotate  were  defec7ve   in  weaving   exogenous   laminin  matrix.   Dissolu7on   of   basement  membrane   around  mature,   nonrota7ng   acini   restored   rota7onal  movement  and  the  ability  to  assemble  exogenous  laminin.  Thus,  coordinated  rota7onal  movement  is   a   unique   mechanophysical   process   observed   during   normal   3D   morphogenesis   that   regulates  laminin  matrix  assembly  and  is  lost  in  cancer-­‐derived  epithelial  cells.  

Wang  et  al.  PNAS.  2013;  110:  163‒168.  

Page 29: 201310 springer mexico 120min

Coverage  and  Staffing  Plan  Manuscript  structure   Writing your abstract

Our  understanding  of   the  mechanisms  by  which  ducts  and   lobules  develop   is  derived   from  model  organisms   and   three-­‐dimensional   (3D)   cell   culture   models   wherein   mammalian   epithelial   cells  undergo  morphogenesis   to   form  mul7cellular   spheres  with   a   hollow   central   lumen.  However,   the  mechanophysical   proper7es   associated  with   epithelial  morphogenesis   are   poorly   understood.  We  performed  mul7dimensional   live-­‐cell   imaging  analysis   to   track   the  morphogene7c  process   star7ng  from  a  single  cell  to  the  development  of  a  mul7cellular,  spherical  structure  composed  of  polarized  epithelial   cells   surrounding   a   hollow   lumen.   We   report   that   in   addi7on   to   ac7vely   maintaining  apicobasal   polarity,   the   structures   underwent   rota7onal  mo7ons   at   rates   of   15–20  μm/h   and   the  structures  rotated  360°  every  4  h  during  the  early  phase  of  morphogenesis.  Rota7onal  mo7on  was  independent  of  the  cell  cycle,  but  was  blocked  by  loss  of  the  epithelial  polarity  proteins  Scribble  or  Pard3,   or   by   inhibi7on   of   dynein-­‐based  microtubule  motors.   Interes7ngly,   none   of   the   structures  derived  from  human  cancer  underwent  rota7onal  mo7on.  We  found  a  direct  rela7onship  between  rota7onal   mo7on   and   assembly   of   endogenous   basement   membrane   matrix   around   the   3D  structures,   and   that   structures   that   failed   to   rotate  were  defec7ve   in  weaving   exogenous   laminin  matrix.   Dissolu7on   of   basement  membrane   around  mature,   nonrota7ng   acini   restored   rota7onal  movement  and  the  ability  to  assemble  exogenous  laminin.  Thus,  coordinated  rota7onal  movement  is   a   unique   mechanophysical   process   observed   during   normal   3D   morphogenesis   that   regulates  laminin  matrix  assembly  and  is  lost  in  cancer-­‐derived  epithelial  cells.  Conclusions  

Results  

Methods  

Background  

Wang  et  al.  PNAS.  2013;  110:  163‒168.  

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Coverage  and  Staffing  Plan  Manuscript  structure   Introduction

General  introduc<on  

Specific  aims  Aims  

Current  state  of  the  field  

Problem  in  the  field  

Secondary  introduc<on  

Current  state  of  the  field  

Problem  in  the  field  

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Coverage  and  Staffing  Plan  Manuscript  structure  

Introduction – flow of information

Lung   cancer   is   the   leading   cause   of   cancer  mortality   for  men   and  women.   Despite   smoking   preven7on   and   cessa7on   programs   and   advances   in   early  detec7on,  the  5-­‐year  survival  rate  for   lung  cancer   is  only  16%  with  current  therapies.  Although  lung  cancer   incidence  rates  have  recently  declined  in  the  United  States,  more  lung  cancer  is  now  diagnosed  when  considered  together  in  former-­‐  and  never-­‐smokers  than  in  current  smokers.  Thus,  even  if  all  of  the  na7onal  an7-­‐smoking  campaign  goals  are  met,  lung  cancer  will  remain  a  major  public  health  problem  for  decades.  New  ways  to  treat  or  prevent  lung  cancer  are  therefore  needed.    One  poten7al   therapeu7c  target   for   lung  cancer   is   the  Wnt  signaling  pathway.  The  canonical  Wnt  signaling  pathway   in  mammals  consists  of  a   family  of  secreted  lipid-­‐modified  Wnt  protein  ligands  that  bind  to  a  family  of  7-­‐pass  transmembrane  Frizzled  (Fzd)  receptors,  as  reviewed.  In  brief,  in  the  absence  of  ligand,  glycogen  synthase  kinase-­‐3  (GSK3),  in  complex  with  axin  and  adenomatous  polyposis  coli  (APC),  cons7tu7vely  phosphorylates  β-­‐catenin,  the  primary  Wnt   signaling   effector,   targe7ng   it   for   ubiqui7na7on   and   proteasomal   destruc7on.   Ligand   binding   engages   a   pathway   involving   Dishevelled   (Dvl)   that  inhibits  GSK3,  allowing  β-­‐catenin  to  accumulate  in  a  hypophosphorylated  form.  This  stabilized  form  of  β-­‐catenin  can  translocate  to  the  nucleus,  where  it  ac7vates   target   gene   transcrip7on   by   complexing  with   T   cell   factor   (TCF)   and   lymphoid   enhancer-­‐binding   factor   (LEF).   In   addi7on   to   key  mediators   of  embryonic  development,  these  target  genes  include  cri7cal  growth-­‐regulators  such  as  myc  and  cyclin  D1.      Aberrant  Wnt  signaling  due  to  muta7ons  in  β-­‐catenin  or  APC  drives  deregulated  growth  in  both  familial  and  non-­‐hereditary  colorectal  cancers.  However,  non-­‐small  cell  lung  cancers  (NSCLC),  the  most  common  type  of  lung  cancer,  rarely  harbor  APC  or  β-­‐catenin  muta7ons.  Rather,  aberrant  Wnt  ac7vity  in  lung  cancer  is  linked  to  increased  expression  of  upstream  Wnt  signaling  effectors  such  as  Dvl  or  decreased  expression  of  Wnt  antagonists  such  as  Wnt-­‐inhibitory  factor  1  (Wif-­‐1).      Effec7ve  pharmacological  inhibitors  of  the  Wnt  pathway  have  only  recently  become  available.  Screens  for  small-­‐molecule  antagonists  of  the  Wnt  pathway  found  two  enzymes  to  be  key  mediators  of  Wnt  signaling.  These  are  poly-­‐ADP-­‐ribose  polymerase  (PARP)  enzymes,  tankyrase  (TNKS)  1  and  TNKS2,  which  anach  poly-­‐ADP-­‐ribose  (PAR)  onto  substrate  proteins.  Their  roles  in  regula7ng  telomerase  func7on  and  mito7c  spindle  forma7on  are  known,  but  their  role  in  PARsyla7ng  axin  so  as  to  maintain  the  op7mal  level  for  canonical  Wnt  signaling  has  only  recently  been  recognized.  The  compounds  iden7fied  in  these  screens,  XAV939,  IWR-­‐1  exo,  and  IWR-­‐1  endo,  act  by  specifically  inhibi7ng  the  PARP  ac7vity  of  TNKS1  and  TNKS2.  IWR-­‐exo  is  a  stereoisomer  of  IWR-­‐1  endo  with   ~14-­‐fold   lower   EC50.   PARP   inhibi7on   is   a   tractable   pharmacological   target   in   vivo,   as   antagonists   of   other   PARP   homologs   exert   an7neoplas7c  responses  in  breast  and  ovarian  cancer,  as  reviewed.      This  study  explored  the  hypothesis   that   inhibi7on  of  TNKS  by  pharmacological  or  gene7c  means  would   inhibit   lung  cancer  growth   in  vitro  and   in  vivo   in  clinically-­‐relevant  transgenic  mouse  models  of  lung  cancer  that  were  previously  developed,  as  reviewed.    

General  introduc<on  

Secondary  introduc<on  

Objec<ves  Busch  et  al.  BMC  Cancer.  2012;  13:  211.  

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Coverage  and  Staffing  Plan  Manuscript  structure   Methods

How  it  was  done  

General  methods  Specific  techniques  (discuss  controls)  

Data  analysis  Quan<fica<on  methods  

Sta<s<cal  tests  

What  was  used  

Samples  or  par<cipants  Materials  

How  it  was  analyzed  

Sus  métodos  reflejan  su  diseño  experimental  

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Coverage  and  Staffing  Plan  Manuscript  structure   Results

1.   Ini<al  observa<on  2.   Characteriza<on  3.   Applica<on  

Each  subsec<on  corresponds  to    

one  figure  

What  you  found,  not  what  it  means  

Logical  presenta<on  

Subsec<ons  

Factual  descrip<on  

Presente  sus  resultados  en  un  orden  lógico  

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Coverage  and  Staffing  Plan  Manuscript  structure   Display items

Present  large  amount  of  data  quickly  and  

efficiently  

Keep  it  simple:  use  separate  panels  if  

necessary  

Must  be  able  to  stand  alone:  clear  labels  and  figure  legends  

Usually  the  first  thing  readers  will  look  at  

Figures,  graphs  &  tables  

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Coverage  and  Staffing  Plan  Manuscript  structure   Figures/schematics

Clear  indicators  

Clear  figure  legend  Kindlin-­‐2   knockdown   and   focal   adhesion  localiza<on.   A.   Confocal   immunofluorescent  microscopy   with   an7-­‐β1   integrin   (green)   and  an7-­‐paxillin   (red)   on   C2C12   cells   transfected  with   RNAi   and   then   changed   to   differen7a7on  media   for  2  days.  Control   cells   (scr  RNAi)   show  linear   staining   consistent   with   localiza7on   to  costameres   (arrows),   as   well   as   punctate   focal  contact  staining  (arrowheads).  Conversely,  focal  contact   proteins   in   the   kindlin-­‐2   RNAi   cells   fail  to   form   linear   structures   and   instead   are  concentrated   in   unusual   appearing   puncta   (*).  (Scale  bar  =  20  μM).    

Dowling  et  al.  (2008)  BMC  Cell  Biol  9:36.  

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Coverage  and  Staffing  Plan  Manuscript  structure   Discussion

Beginning  

Middle  

End  

Summarize  key  findings    State  major  conclusion  

Restate  major  conclusion  Applica<ons/implica<ons  

Suggest  future  work  

Interpret  results  in  context    of  other  studies  

Describe  limita<ons  

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Coverage  and  Staffing  Plan  Manuscript  structure   References

Cite  all  statements  from    previously  published  works  

Use  reference  management  sorware  EndNote,  Papers,  RefWorks,  

Mendeley  

Cite  broadly  from  different    groups  in  your  field  

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Coverage  and  Staffing  Plan  Manuscript  structure   Linking your ideas

General  background  

Objec<ves  

Methodology  

Results  and  figures  

Summary  of  findings  

Implica<ons  for  the  field  

Relevance  of  findings  

Knowledge  gaps  

Enlace  lógicamente  sus  ideas  en  su  inves3gación  

Current  state  of  the  field  Introduc<on  

Methods  

Results  

Discussion  

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Coverage  and  Staffing  Plan  Manuscript  structure   Linking your ideas

New  ways  to  treat  or  prevent  lung  cancer    are  therefore  needed.  

This  study  explored  the  hypothesis  that  inhibi<on  of  TNKS…would  inhibit  lung  cancer  growth…  

Pharmacological  or  gene<c  inhibi<on  of  TNKS1  and  TNKS2…reduces  lung  cancer  prolifera<on...    

Problem  

Objec<ves  

Conclusion  

Discussion  

Introduc3on  

Busch  et  al.  BMC  Cancer.  2012;13:211.  

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Target  the  journal  

Section 3

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Customer  Service  Target  the  journal  

Chlorophyll  is  present  in  many  plant  organs,  including  immature  fruit  where  it  is  usually  degraded  during  ripening.  Mature  green  kiwifruit   (Ac9nidia   deliciosa)   are   an   excep7on,   with   high  concentra7ons   of   chlorophyll   remaining   in   the   fruit   flesh.   In  gold-­‐fleshed   kiwifruit   (A.   chinensis),   chlorophyll   is   degraded   to  colourless   catabolites   upon   fruit   ripening,   leaving   yellow  carotenoids  visible.  We  have   iden7fied  candidate  genes  for  the  control  of  chlorophyll  degrada7on…  

Pilkington  et  al.  Planta.  2012;  236:  1615−1628.  

The  control  of  chlorophyll  levels  in  maturing  kiwifruit  

Broad focused journal

Planta  

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Customer  Service  Target  the  journal  

Chlorophyll  is  present  in  many  plant  organs,  including  immature  fruit  where  it  is  usually  degraded  during  ripening.  Mature  green  kiwifruit   (Ac9nidia   deliciosa)   are   an   excep7on,   with   high  concentra7ons   of   chlorophyll   remaining   in   the   fruit   flesh.   In  gold-­‐fleshed   kiwifruit   (A.   chinensis),   chlorophyll   is   degraded   to  colourless   catabolites   upon   fruit   ripening,   leaving   yellow  carotenoids  visible.  We  have   iden7fied  candidate  genes  for  the  control  of  chlorophyll  degrada7on…  

Pilkington  et  al.  Planta.  2012;  236:  1615−1628.  

The  control  of  chlorophyll  levels  in  maturing  kiwifruit  Broad  interest  

Broad  interest  

Broad focused journal

Planta  

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Customer  Service  Target  the  journal  

Tradi7onal  weed  management,  such  as  7llage  and  irriga7on,  has  led  to   an   enhanced   maintenance   of   wetland   plant   species   in   fallow  paddy  fields.  Recent  herbicide  usage  and  improvements  in  irriga7on  and   drainage   systems   however   have   caused   habitat   loss   of   these  species,  especially  in  fields  on  open  lowlands…  

Effects  of  <llage  and  irriga<on  on  the  occurrence  and  establishment  of  na<ve  wetland  plant  species  in  fallow  paddy  fields  

Narrow focused journal

Paddy  and  Water  Development  

Takanose  et  al.  Paddy  Water  Environ.  2013;  11:  1−4.  

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Customer  Service  Target  the  journal  

Tradi7onal  weed  management,  such  as  7llage  and  irriga7on,  has  led  to   an   enhanced   maintenance   of   wetland   plant   species   in   fallow  paddy  fields.  Recent  herbicide  usage  and  improvements  in  irriga7on  and   drainage   systems   however   have   caused   habitat   loss   of   these  species,  especially  in  fields  on  open  lowlands…  

Effects  of  <llage  and  irriga<on  on  the  occurrence  and  establishment  of  na<ve  wetland  plant  species  in  fallow  paddy  fields  

Narrow focused journal

Paddy  and  Water  Development  

Takanose  et  al.  Paddy  Water  Environ.  2013;  11:  1−4.  

Keywords  from  the  Aims  and  Scope  

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Effec3ve  wri3ng  

Section 4

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Effec7ve  Wri7ng   High readability

Your  reader  should…  

Understand  your  logic  immediately  

Not  have  to  read  slowly  

Only  have  to  read  once  

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Effec7ve  Wri7ng   1. Short sentences

Reading  once…  4%  of  readers  can  understand  a  27-­‐word  sentence  75%  of  readers  can  understand  a  17-­‐word  sentence  

 Pinner  and  Pinner  (1998)  Communica9on  Skills  

U<lice  sólo  una  idea  por  oracion  15–20  palabras  

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Effec7ve  Wri7ng   Short sentences

30  words  

The   largest  company,  a  Mexican  corpora<on  founded   in  1916  outside  of  Puebla  by  Miguel  Hernández,  was  considered  to  be  a  model   in   the  development  of  modern  employee   condi<ons  by  economists.  

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Effec7ve  Wri7ng   Short sentences

30  words  

The   largest  company,  a  Mexican  corpora<on  founded   in  1916  outside  of  Puebla  by  Miguel  Hernández,  was  considered  to  be  a  model   in   the  development  of  modern  employee   condi<ons  by  economists.  

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Effec7ve  Wri7ng   Short sentences

Economists   considered   the   largest   company   to  be  a  model   in  the   development   of   modern   employee   condi<ons.   This  company  was  a  Mexican  corpora<on  founded  in  1916  outside  of  Puebla  by  Miguel  Hernández.  

16  words  

15  words  One  idea  per  sentence  

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Effec7ve  Wri7ng   2. Active voice

Sentences  wriOen  in  the  ac<ve  voice  are:  

simple   direct   clear   easy  to  read  

The  mechanisms  regula<ng  tumor  growth  were  inves<gated.  Passive  

We  inves<gated  the  mechanisms  regula<ng  tumor  growth.  Ac3ve  

U3lice  la  voz  ac3va  para  ser  más  directos  

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Effec7ve  Wri7ng   Active voice is preferred

“Use  the  ac3ve  voice  when  it  is  less  wordy  and  more  direct  than  the  passive”.  (3rd  ed.,  pg.  42)  

“Use  the  ac3ve  voice  rather  than  the  passive  voice…”.    www.apastyle.org/learn/faqs/effec7ve-­‐verb-­‐use.aspx  

“As  a  maner  of  style,  passive  voice  is  typically,  but  not  always,  inferior  to  ac3ve  voice”.  (15th  ed.,  pg.  177)  

“In  general,  authors  should  use  the  ac3ve  voice…”.  (10th  ed.,  pg.  320)  

ACS  Style  Guide  

APA  Style    

Chicago  Style  Guide  

AMA  Manual  of  Style  

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Effec7ve  Wri7ng   3. Stress position

Los  lectores  se  centran  en  el  final  de  la  oracion  para  iden3ficar  lo  que  es  importante  

1.   You  deserve  a  raise,  but  the  budget  is  <ght.  

Which  sentence  suggests  that  you    will  get  a  raise?  

2.   The  budget  is  <ght,  but  you  deserve  a  raise.  

hnp://wri7ngcenter.unc.edu/handouts/flow/  

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Effec7ve  Wri7ng   Stress position

The  budget  is  <ght,  but  you  deserve  a  raise.  Your  salary  

will  increase  at  the  beginning  of  next  year.  

La  posición  de  tensión  debe  introducir    el  tema  de  la  siguiente  oracio  

hnp://wri7ngcenter.unc.edu/handouts/flow/  

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Effec7ve  Wri7ng   Stress position

The  budget  is  <ght,  but  you  deserve  a  raise.  Your  salary  

will  increase  at  the  beginning  of  next  year.  

La  posición  de  tensión  debe  introducir    el  tema  de  la  siguiente  oracio  

hnp://wri7ngcenter.unc.edu/handouts/flow/  

Stress  posi<on  

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Effec7ve  Wri7ng   Stress position

The  budget  is  <ght,  but  you  deserve  a  raise.  Your  salary  

will  increase  at  the  beginning  of  next  year.  

La  posición  de  tensión  debe  introducir    el  tema  de  la  siguiente  oracio  

hnp://wri7ngcenter.unc.edu/handouts/flow/  

Stress  posi<on   Topic  posi<on  

La  posición  del  tema  iden3fica  de  qué  trata  la  oración  

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Effec7ve  Wri7ng   4. Topic position

The   pa3ent   went   to   the   hospital   to   see   a  gastroenterologist.  The  doctor   then  performed   a   series  of   diagnos3c   tests.   The   results   showed   the   pa<ent  suffered   from   a   bacterial   infec3on.   An3bio3cs   were  prescribed   to   treat   the   infec<on   before   the   pa<ent  developed  an  ulcer.    

idea idea idea idea

Topic  link

sentence

2.5  <mes  more  common  in  English  than  in  Spanish  Simpson  JM.  J  Second  Lang  Writ.  2000;  9:  293–309.  

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Effec7ve  Wri7ng   Manuscript structure

Lung   cancer   is   the   leading   cause   of   cancer   mortality   for  men   and   women.   Despite   smoking   preven<on   and  cessa<on  programs…  …New  ways  to  treat  or  prevent   lung  cancer  are  therefore  needed.    One  poten<al  therapeu<c  target  for  lung  cancer  is  the  Wnt  signaling  pathway.  The  canonical  Wnt  signaling  pathway  in  mammals  consists  of  a…  

Busch  et  al.  BMC  Cancer.  2012;  13:  211.  

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Effec7ve  Wri7ng  

Lung   cancer   is   the   leading   cause   of   cancer   mortality   for  men   and   women.   Despite   smoking   preven<on   and  cessa<on  programs…  …New  ways  to  treat  or  prevent   lung  cancer  are  therefore  needed.    One  poten<al  therapeu<c  target  for  lung  cancer  is  the  Wnt  signaling  pathway.  The  canonical  Wnt  signaling  pathway  in  mammals  consists  of  a…  

Busch  et  al.  BMC  Cancer.  2012;  13:  211.  

Topic  sentence  

Topic  sentence  Stress  sentence  

U<lice  la  posicion  de    tensión  y  tema    en  su  escrito  de  manera  lógica  al  presentar  la  información  

Manuscript structure

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Cover  lebers  

Section 5

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Coverage  and  Staffing  Plan  Cover  leners  

Abstract:  First  impression  for  readers  

Cover  leOers  are  the  first  impression  for  the  journal  editor  

Significance  Relevance  

Level  of  English  Interes<ng  to  their  readers?  

Is  your  work  important?  

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Coverage  and  Staffing  Plan  Cover  leners   Building your cover letter

Marc  Lippman,  MD  Editor-­‐in-­‐Chief  Breast  Cancer  Research  and  Treatment    3  September  2013    Dear  Dr  Lippman,    Please   find   enclosed   our   manuscript   en7tled   “Evalua7on   of   the  Glasgow  prognos7c  score  in  pa7ents  undergoing  cura7ve  resec7on  for  breast  cancer  liver  metastases,”  which  we  would  like  to  submit  for  publica7on  as  an  Original  Ar7cle  in  Breast  Cancer  Research  and  Treatment.    

Journal  editor’s  name  

Manuscript  <tle  

Publica<on  type  

Indique  el  Gtulo  de  su  escrito  y  3po  de  publicación  

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Coverage  and  Staffing  Plan  Cover  leners   Building your cover letter

The   Glasgow   prognos7c   score   (GPS)   is   of   value   for   a   variety   of  tumours.   Several   studies   have   inves7gated   the   prognos7c   value   of  the   GPS   in   pa7ents  with  metasta7c   breast   cancer,   but   few   studies  have   performed   such   an   inves7ga7on   for   pa7ents   undergoing   liver  resec7on   for   liver  metastases.   Furthermore,   there   are   currently   no  studies  that  have  examined  the  prognos7c  value  of  the  modified  GPS  (mGPS)   in   these  pa7ents.  The  present  study  evaluated  the  mGPS   in  terms   of   its   prognos7c   value   for   postopera7ve   death   in   pa7ents  undergoing  liver  resec7on  for  breast  cancer  liver  metastases.  

Explique  por  qué  su  inves<gación  deberia  de  hacerse  

ü  Current  state  of  the  field  ü  Problem  researchers  are  facing  

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Coverage  and  Staffing  Plan  Cover  leners   Building your cover letter

The   Glasgow   prognos7c   score   (GPS)   is   of   value   for   a   variety   of  tumours.   Several   studies   have   inves7gated   the   prognos7c   value   of  the   GPS   in   pa7ents  with  metasta7c   breast   cancer,   but   few   studies  have   performed   such   an   inves7ga7on   for   pa7ents   undergoing   liver  resec7on   for   liver  metastases.   Furthermore,   there   are   currently   no  studies  that  have  examined  the  prognos7c  value  of  the  modified  GPS  (mGPS)   in   these  pa7ents.  The  present  study  evaluated  the  mGPS   in  terms   of   its   prognos7c   value   for   postopera7ve   death   in   pa7ents  undergoing  liver  resec7on  for  breast  cancer  liver  metastases.  

Explique  por  qué  su  inves<gación  deberia  de  hacerse  

ü  Current  state  of  the  field  ü  Problem  researchers  are  facing  

Introduc<on  

Problem  

Objec<ves  

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Coverage  and  Staffing  Plan  Cover  leners   Building your cover letter

Resuma  sus  conclusiones  clave  

ü  Briefly  describe  your  methodology  ü  Summarize  your  key  findings  

A   total   of   318   pa7ents   with   breast   cancer   liver   metastases   who  underwent  hepatectomy  over  a  15-­‐year  period  were  included  in  this  study.   The   mGPS   was   calculated   based   on   the   levels   of   C-­‐reac7ve  protein   and   albumin,   and   the   disease-­‐free   survival   and   cancer-­‐specific   survival   rates   were   evaluated   in   rela7on   to   the   mGPS.  Overall,  the  results  showed  a  significant  associa7on  between  cancer-­‐specific   survival   and   the  mGPS  and   carcinoembryonic   an7gen   level,  and  a  higher  mGPS  was  associated  with  increased  aggressiveness  of  liver  recurrence  and  poorer  survival  in  these  pa7ents.  

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Coverage  and  Staffing  Plan  Cover  leners   Building your cover letter

A   total   of   318   pa7ents   with   breast   cancer   liver   metastases   who  underwent  hepatectomy  over  a  15-­‐year  period  were  included  in  this  study.   The   mGPS   was   calculated   based   on   the   levels   of   C-­‐reac7ve  protein   and   albumin,   and   the   disease-­‐free   survival   and   cancer-­‐specific   survival   rates   were   evaluated   in   rela7on   to   the   mGPS.  Overall,  the  results  showed  a  significant  associa7on  between  cancer-­‐specific   survival   and   the  mGPS  and   carcinoembryonic   an7gen   level,  and  a  higher  mGPS  was  associated  with  increased  aggressiveness  of  liver  recurrence  and  poorer  survival  in  these  pa7ents.  

ü  Briefly  describe  your  methodology  ü  Summarize  your  key  findings  

Methods  

Key  results  

Resuma  sus  conclusiones  clave  

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Coverage  and  Staffing  Plan  Cover  leners   Building your cover letter

This  study  is  the  first  to  demonstrate  that  the  preopera7ve  mGPS,  a  simple   clinical   tool,   is   a   useful   prognos7c   factor   for   postopera7ve  survival  in  breast  cancer  pa7ents  undergoing  cura7ve  resec7on  for  liver   metastases.   This   informa7on   is   immediately   clinically  applicable   for   surgeons   and   medical   oncologists   trea7ng   such  pa7ents.  As  a  premier  journal  covering  breast  cancer  treatment,  we  believe   that  Breast   Cancer   Research   and   Treatment   is   the   perfect  plazorm  from  which  to  share  our  results  with  all   those  concerned  with  breast  cancer.  

Explique  por  qué  su  escrito  sería  interesante  para  los  lectores  de  una  revista  

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Coverage  and  Staffing  Plan  Cover  leners   Building your cover letter

This  study  is  the  first  to  demonstrate  that  the  preopera7ve  mGPS,  a  simple   clinical   tool,   is   a   useful   prognos7c   factor   for   postopera7ve  survival  in  breast  cancer  pa7ents  undergoing  cura7ve  resec7on  for  liver   metastases.   This   informa7on   is   immediately   clinically  applicable   for   surgeons   and   medical   oncologists   trea7ng   such  pa7ents.  As  a  premier  journal  covering  breast  cancer  treatment,  we  believe   that  Breast   Cancer   Research   and   Treatment   is   the   perfect  plazorm  from  which  to  share  our  results  with  all   those  concerned  with  breast  cancer.  

Explique  por  qué  su  escrito  sería  interesante  para  los  lectores  de  una  revista  

Conclusion  

Relevance  

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Coverage  and  Staffing  Plan  Cover  leners   Building your cover letter

This  study  is  the  first  to  demonstrate  that  the  preopera7ve  mGPS,  a  simple   clinical   tool,   is   a   useful   prognos7c   factor   for   postopera7ve  survival  in  breast  cancer  pa7ents  undergoing  cura7ve  resec7on  for  liver   metastases.   This   informa7on   is   immediately   clinically  applicable   for   surgeons   and   medical   oncologists   trea7ng   such  pa7ents.  As  a  premier  journal  covering  breast  cancer  treatment,  we  believe   that  Breast   Cancer   Research   and   Treatment   is   the   perfect  plazorm  from  which  to  share  our  results  with  all   those  concerned  with  breast  cancer.  

Use  palabras  clave  a  par<r  de  los  obje<vos  y    el  alcance  en  su  carta  de  presentación  

Keywords  from  the  Aims  and  Scope  

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Coverage  and  Staffing  Plan  Cover  leners   Building your cover letter

We  confirm  that  this  manuscript  has  not  been  published  elsewhere  and  is  not  under  considera7on  by  another  journal.  All  authors  have  approved   the   manuscript,   including   authorship   and   order   of  authorship,   and   agree  with   submission   to  Breast   Cancer   Research  and   Treatment.   This   study  was   funded   by   the  Ministry   of   Health,  Labour   and  Welfare.   The   authors   have   no   conflicts   of   interest   to  declare.  

Exponga  responsabilidad  legal  sobre  é<ca  de  la  inves<gación  y  la  publicación  

ü  Disclaimers  related  to  publica3on  ethics  ü  Sources  of  Funding  ü  Conflicts  of  interest  

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Coverage  and  Staffing  Plan  Cover  leners   Building your cover letter

We  confirm  that  this  manuscript  has  not  been  published  elsewhere  and  is  not  under  considera7on  by  another  journal.  All  authors  have  approved   the   manuscript,   including   authorship   and   order   of  authorship,   and   agree  with   submission   to  Breast   Cancer   Research  and   Treatment.   This   study  was   funded   by   the  Ministry   of   Health,  Labour   and  Welfare.   The   authors   have   no   conflicts   of   interest   to  declare.  

Exponga  responsabilidad  legal  sobre  é<ca  de  la  inves<gación  y  la  publicación  

ü  Disclaimers  related  to  publica3on  ethics  ü  Sources  of  Funding  ü  Conflicts  of  interest  

Funding  

Ethics  

Conflicts  of  interest  

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Coverage  and  Staffing  Plan  Cover  leners   Building your cover letter

We  would  like  to  recommend  the  following  reviewers  to  evaluate  our  manuscript:        1.  Reviewer  1  and  contact  informa7on  2.  Reviewer  2  and  contact  informa7on  3.  Reviewer  3  and  contact  informa7on  4.  Reviewer  4  and  contact  informa7on      Please  address  all  correspondence  to:    

ü  Recommended  reviewers  ü  Author’s  contact  informa7on  

Other  important  informa<on:  

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Coverage  and  Staffing  Plan  Cover  leners   Building your cover letter

We  would  like  to  recommend  the  following  reviewers  to  evaluate  our  manuscript:        1.  Reviewer  1  and  contact  informa7on  2.  Reviewer  2  and  contact  informa7on  3.  Reviewer  3  and  contact  informa7on  4.  Reviewer  4  and  contact  informa7on      Please  address  all  correspondence  to:    

Recommend  reviewers  

Other  important  informa<on:  

ü  Recommended  reviewers  ü  Author’s  contact  informa7on  

Contact  informa<on  

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Coverage  and  Staffing  Plan  Cover  leners   A good cover letter

Marc  Lippman,  MD  Editor-­‐in-­‐Chief  Breast  Cancer  Research  and  Treatment    3  September  2013    Dear  Dr  Lippman,   Please   find   enclosed   our  manuscript   en7tled   “Evalua7on   of   the  Glasgow  prognos7c   score   in   pa7ents   undergoing   cura7ve   resec7on   for   breast   cancer   liver  metastases,”  which  we  would   like   to   submit   for  publica7on  as  an  Original  Ar7cle  in  Breast  Cancer  Research  and  Treatment.  .     The  Glasgow  prognos7c   score   (GPS)   is   of   value   for   a   variety   of   tumours.   Several   studies   have   inves7gated   the   prognos7c   value   of   the  GPS   in   pa7ents  with  metasta7c   breast   cancer,   but   few   studies   have  performed  such  an  inves7ga7on  for  pa7ents  undergoing  liver  resec7on  for  liver  metastases.  Furthermore,  there  are  currently  no  studies  that  have  examined  the  prognos7c  value  of  the  modified  GPS  (mGPS)  in  these  pa7ents.  The  present  study  evaluated  the  mGPS  in  terms  of  its  prognos7c  value  for  postopera7ve  death  in  pa7ents  undergoing  liver  resec7on  for  breast  cancer  liver  metastases.   A  total  of  318  pa7ents  with  breast  cancer  liver  metastases  who  underwent  hepatectomy  over  a  15-­‐year  period  were  included  in  this  study.  The  mGPS  was  calculated  based  on  the  levels  of  C-­‐reac7ve  protein  and  albumin,  and  the  disease-­‐free  survival  and  cancer-­‐specific  survival   rates  were  evaluated   in  rela7on  to  the  mGPS.  Prognos7c  significance  was  retrospec7vely  analyzed  by  univariate  and  mul7variate  analyses.  Overall,  the  results  showed  a  significant  associa7on  between  cancer-­‐specific  survival  and  the  mGPS  and  carcinoembryonic  an7gen  level,  and  a  higher  mGPS  was  associated  with  increased  aggressiveness  of  liver  recurrence  and  poorer  survival  in  these  pa7ents.    This  study  is  the  first  to  demonstrate  that  the  preopera7ve  mGPS,  a  simple  clinical  tool,  is  a  useful  prognos7c  factor  for  postopera7ve  survival  in  breast  cancer  pa7ents  undergoing  cura7ve  resec7on  for  liver  metastases.  This  informa7on  is  immediately  clinically  applicable  for  surgeons  and  medical  oncologists  trea7ng  such  pa7ents.  As  a  premier  journal  covering  breast  cancer  treatment,  we  believe  that  Breast  Cancer  Research  and  Treatment  is  the  perfect  plazorm  from  which  to  share  our  results  with  all  those  concerned  with  breast  cancer.      We  confirm  that  this  manuscript  has  not  been  published  elsewhere  and  is  not  under  considera7on  by  another  journal.  All  authors  have  approved  the  manuscript,  including  authorship  and  order  of  authorship,  and  agree  with  submission  to  Breast  Cancer  Research  and  Treatment.  This  study  was  funded  by  the  Ministry  of  Health,  Labour  and  Welfare.  The  authors  have  no  conflicts  of  interest  to  declare.      We  would  like  to  recommend  the  following  reviewers  to  evaluate  our  manuscript:        Reviewer  1  and  contact  informa7on  Reviewer  2  and  contact  informa7on  Reviewer  3  and  contact  informa7on  Reviewer  4  and  contact  informa7on      Please  address  all  correspondence  to:      We  look  forward  to  hearing  from  you  at  your  earliest  convenience.      Yours  sincerely,  

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Coverage  and  Staffing  Plan  Cover  leners   A good cover letter

Marc  Lippman,  MD  Editor-­‐in-­‐Chief  Breast  Cancer  Research  and  Treatment    3  September  2013    Dear  Dr  Lippman,   Please   find   enclosed   our  manuscript   en7tled   “Evalua7on   of   the  Glasgow  prognos7c   score   in   pa7ents   undergoing   cura7ve   resec7on   for   breast   cancer   liver  metastases,”  which  we  would   like   to   submit   for  publica7on  as  an  Original  Ar7cle  in  Breast  Cancer  Research  and  Treatment.  .     The  Glasgow  prognos7c   score   (GPS)   is   of   value   for   a   variety   of   tumours.   Several   studies   have   inves7gated   the   prognos7c   value   of   the  GPS   in   pa7ents  with  metasta7c   breast   cancer,   but   few   studies   have  performed  such  an  inves7ga7on  for  pa7ents  undergoing  liver  resec7on  for  liver  metastases.  Furthermore,  there  are  currently  no  studies  that  have  examined  the  prognos7c  value  of  the  modified  GPS  (mGPS)  in  these  pa7ents.  The  present  study  evaluated  the  mGPS  in  terms  of  its  prognos7c  value  for  postopera7ve  death  in  pa7ents  undergoing  liver  resec7on  for  breast  cancer  liver  metastases.   A  total  of  318  pa7ents  with  breast  cancer  liver  metastases  who  underwent  hepatectomy  over  a  15-­‐year  period  were  included  in  this  study.  The  mGPS  was  calculated  based  on  the  levels  of  C-­‐reac7ve  protein  and  albumin,  and  the  disease-­‐free  survival  and  cancer-­‐specific  survival   rates  were  evaluated   in  rela7on  to  the  mGPS.  Prognos7c  significance  was  retrospec7vely  analyzed  by  univariate  and  mul7variate  analyses.  Overall,  the  results  showed  a  significant  associa7on  between  cancer-­‐specific  survival  and  the  mGPS  and  carcinoembryonic  an7gen  level,  and  a  higher  mGPS  was  associated  with  increased  aggressiveness  of  liver  recurrence  and  poorer  survival  in  these  pa7ents.    This  study  is  the  first  to  demonstrate  that  the  preopera7ve  mGPS,  a  simple  clinical  tool,  is  a  useful  prognos7c  factor  for  postopera7ve  survival  in  breast  cancer  pa7ents  undergoing  cura7ve  resec7on  for  liver  metastases.  This  informa7on  is  immediately  clinically  applicable  for  surgeons  and  medical  oncologists  trea7ng  such  pa7ents.  As  a  premier  journal  covering  breast  cancer  treatment,  we  believe  that  Breast  Cancer  Research  and  Treatment  is  the  perfect  plazorm  from  which  to  share  our  results  with  all  those  concerned  with  breast  cancer.      We  confirm  that  this  manuscript  has  not  been  published  elsewhere  and  is  not  under  considera7on  by  another  journal.  All  authors  have  approved  the  manuscript,  including  authorship  and  order  of  authorship,  and  agree  with  submission  to  Breast  Cancer  Research  and  Treatment.  This  study  was  funded  by  the  Ministry  of  Health,  Labour  and  Welfare.  The  authors  have  no  conflicts  of  interest  to  declare.      We  would  like  to  recommend  the  following  reviewers  to  evaluate  our  manuscript:        Reviewer  1  and  contact  informa7on  Reviewer  2  and  contact  informa7on  Reviewer  3  and  contact  informa7on  Reviewer  4  and  contact  informa7on      Please  address  all  correspondence  to:      We  look  forward  to  hearing  from  you  at  your  earliest  convenience.      Yours  sincerely,  

Manuscript  informa<on  

Background  

Key  findings  

Relevance  Disclaimers  

Recommended  reviewers  

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Coverage  and  Staffing  Plan  Cover  leners   Recommending

reviewers

“When   submiKng   your   paper,   you   must   provide   the  names,   affilia7ons,   and   valid   e-­‐mail   addresses   of   five   (5)  reviewers.   If   you   do   not   do   so,   your   paper   will   be  returned,  unreviewed.”  

“Authors   are   requested   to   provide   the   names   and   full  addresses  (including  e-­‐mail  address)  of  up  to  four  poten7al  referees…”  

Verifique  las  directrices  de  la  revista  para  determinar  cuántos  revisores  se  recomiendan  

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Coverage  and  Staffing  Plan  Cover  leners   Recommending

reviewers

Where  to  find  them?  

From  your  reading/references,  networking  at  conferences  

How  senior?   Aim  for  mid-­‐level  researchers  

Who  to  avoid?   Collaborators  (past  5  years),  researchers  from  same  ins<tu<on  

Interna3onal  list:    1  or  2  from  Asia,  1  or  2  from  Europe,  and  1  or  2  from  the  Americas  

Recomiende  inves3gadores  de  nivel    medio  de  diferentes  países  

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Peer  Review  

Section 6

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Peer  Review   Improves your manuscript

Get  involved  in  the    peer  review  process  

La  revisión  por  pares  es  un  proceso    posi<vo  que  mejorará  su  manuscito  

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Peer  Review   What reviewers are looking for

The  science  

The  manuscript  

ü  Relevant  hypothesis  ü  Good  experimental  design  ü  Appropriate  methodology  ü  Good  data  analysis  ü  Valid  conclusions  

ü  Logical  flow  of  informa<on  ü  Manuscript  structure  and  formazng  ü  Appropriate  references  ü  High  readability  

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Peer  Review  

Response  leOer  

Responda  claramente  a  cada    comentario  de  sus  revisores  

Easy  to  see  changes  

Refer  to  line  and  page  numbers  

Use  a  different  color  font  

Highlight  the  text  

Revision

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Peer  Review   Writing a response letter

Marc  Lippman,  MD  Editor-­‐in-­‐Chief  Breast  Cancer  Research  and  Treatment    3  September  2013    Dear  Dr  Lippman,    Re:  Resubmission  of  manuscript  reference  No.  WJS-­‐07-­‐5739    Please  find  anached  a  revised  version  of  our  manuscript  originally  en7tled  “Evalua7on  of  the  Glasgow  prognos7c  score  in  pa7ents  undergoing  cura7ve  resec7on  for  breast  cancer  liver  metastases,”  which  we  would  like  to  resubmit  for  considera7on  for  publica7on  in  the  Breast  Cancer  Research  and  Treatment.    The  reviewer’s  comments  were  highly  insighzul  and  enabled  us  to  greatly  improve  the  quality  of  our  manuscript.  In  the  following  pages  are  our  point-­‐by-­‐point  responses  to  each  of  the  comments.    Revisions  in  the  manuscript  are  shown  as  underlined  text.  In  accordance  with  the  first  comment,  the  7tle  has  been  revised  and  the  en7re  manuscript  has  undergone  substan7al  English  edi7ng.    We  hope  that  the  revisions  in  the  manuscript  and  our  accompanying  responses  will  be  sufficient  to  make  our  manuscript  suitable  for  publica7on  in  the  Breast  Cancer  Research  and  Treatment.  

Address  editor  personally  

Manuscript  ID  number  

Thank  reviewers  

Highlight  major  changes  

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Peer  Review   Agreeing with reviewers

Reviewer  Comment:   In  your  analysis  of  the  data  you  have  chosen  to   use   a   somewhat   obscure   fiGng   func9on   (regression).     In   my  opinion,  a  simple  Gaussian  func9on  would  have  sufficed.  Moreover,  the   results   would   be   more   instruc9ve   and   easier   to   compare   to  previous  results.  

Response:   We   agree   with   the   reviewer’s   assessment   of   the  analysis.  Our  tailored  func7on,  in  its  current  form,  makes  it  difficult  to   tell   that   this   measurement   cons7tutes   a   significant  improvement   over   previously   reported   values.   We   describe   our  new  analysis  using  a  Gaussian  fiKng  func7on  in  our  revised  Results  sec7on  (Page  6,  Lines  12–18).  

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Peer  Review  

Reviewer  Comment:   In  your  analysis  of  the  data  you  have  chosen  to   use   a   somewhat   obscure   fiGng   func9on   (regression).     In   my  opinion,  a  simple  Gaussian  func9on  would  have  sufficed.  Moreover,  the   results   would   be   more   instruc9ve   and   easier   to   compare   to  previous  results.  

Response:   We   agree   with   the   reviewer’s   assessment   of   the  analysis.  Our  tailored  func7on,  in  its  current  form,  makes  it  difficult  to   tell   that   this   measurement   cons7tutes   a   significant  improvement   over   previously   reported   values.   We   describe   our  new  analysis  using  a  Gaussian  fiKng  func7on  in  our  revised  Results  sec7on  (Page  6,  Lines  12–18).  

Agreeing with reviewers

Agreement  

Revisions  Loca<on  

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Peer  Review  Disagreeing with reviewers

Reviewer  Comment:  In  your  analysis  of  the  data  you  have  chosen  to   use   a   somewhat   obscure   fiGng   func9on   (regression).     In   my  opinion,   a   simple   Gaussian   func9on   would   have   sufficed.  Moreover,   the   results   would   be   more   instruc9ve   and   easier   to  compare  to  previous  results.  

Response:   Although   a   simple   Gaussian   fit   would   facilitate  comparison  with  the  results  of  other  studies,  our  tailored  func7on  allows   for   the   analysis   of   the   data   in   terms   of   the   Smith  model  [Smith   et   al.,   1998].   We   have   now   explained   the   use   of   this  func7on   and   the   Smith   model   in   our   revised   Discussion   sec7on  (Page  12,  Lines  2–6).  

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Peer  Review  

Reviewer  Comment:  In  your  analysis  of  the  data  you  have  chosen  to   use   a   somewhat   obscure   fiGng   func9on   (regression).     In   my  opinion,   a   simple   Gaussian   func9on   would   have   sufficed.  Moreover,   the   results   would   be   more   instruc9ve   and   easier   to  compare  to  previous  results.  

Response:   Although   a   simple   Gaussian   fit   would   facilitate  comparison  with  the  results  of  other  studies,  our  tailored  func7on  allows   for   the   analysis   of   the   data   in   terms   of   the   Smith  model  [Smith   et   al.,   1998].   We   have   now   explained   the   use   of   this  func7on   and   the   Smith   model   in   our   revised   Discussion   sec7on  (Page  12,  Lines  2–6).  

Disagreeing with reviewers

Revisions  

Loca<on  

Evidence  

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Peer  Review  

Reviewer   comment:   The   authors   looked   for   polymorphisms   in  the  promoter   region  of   the  gene;  however,   they  didn't  evaluate  the  untranslated   regions.  That   is  one  of  my  concerns  about   this  methodology.  

“Hidden” questions

Rephrased   ques3on:   Why   didn’t   the   authors   evaluate  polymorphisms  in  the  untranslated  regions  of  the  gene?  

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Peer  Review  

Reviewer   comment:   The   authors   looked   for   polymorphisms   in  the  promoter   region  of   the  gene;  however,   they  didn't  evaluate  the  untranslated   regions.  That   is  one  of  my  concerns  about   this  methodology.  

“Hidden” questions

Response:   In   this   study,  we   decided   to   focus   on   the   promoter  region  of  this  gene  because  previous  studies  [Yajima  et  al.,  2010;  Jackson   et   al.,   2011]   have   shown   that   its   transcrip7on   was  par7cularly   affected.   This   has   now   been   clarified   in   the  Discussion  sec7on  of  our  manuscript  (Page  16,  Line  24–28).  

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Peer  Review  

Reviewer   comment:   The   authors   looked   for   polymorphisms   in  the  promoter   region  of   the  gene;  however,   they  didn't  evaluate  the  untranslated   regions.  That   is  one  of  my  concerns  about   this  methodology.  

“Hidden” questions

Response:   In   this   study,  we   decided   to   focus   on   the   promoter  region  of  this  gene  because  previous  studies  [Yajima  et  al.,  2010;  Jackson   et   al.,   2011]   have   shown   that   its   transcrip7on   was  par7cularly   affected.   This   has   now   been   clarified   in   the  Discussion  sec7on  of  our  manuscript  (Page  16,  Line  24–28).  

Revisions  

Loca<on  

Evidence  

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Summary  ü Advantages  of  publishing  in  English  ü Choosing  the  most  suitable  journal  

ü Logically  presen<ng  informa<on  in  your  manuscript  

ü Clearly  communica<ng  your  ideas  in  English  

ü Communica<ng  with  journal  editors  

ü Naviga<ng  peer  review  

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